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Commit c3c1a41c authored by Arnaud Duvermy's avatar Arnaud Duvermy
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add docker v2.0.8

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8e7416983fa0e6c8a76e175751974bcdb121743a
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FROM rocker/r-base:4.3.1
RUN apt-get -y update && \
apt-get -y install cmake libxml2-dev libcurl4-gnutls-dev
COPY HTRfit_2.0.8.tar.gz /HTRfit_2.0.8.tar.gz
RUN R -e "install.packages(c('parallel', 'data.table', 'ggplot2', 'gridExtra', 'glmmTMB', 'magrittr', 'MASS', 'reshape2', 'rlang', 'stats', 'utils', 'BiocManager', 'car'))"
RUN R -e "BiocManager::install('S4Vectors', update = FALSE)"
RUN R -e "BiocManager::install('DESeq2', update = FALSE)"
RUN R -e "install.packages('/HTRfit_2.0.8.tar.gz', repos = NULL, type='source')"
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