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Commit eb8347cf authored by Xavier Grand's avatar Xavier Grand
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RNAseq_XGR, modif idx_genome, pb with STAR, indexed genome not found

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......@@ -150,7 +150,7 @@ workflow {
else {
idx_genome = "${params.idx}"
Channel
.fromPath( idx_genome )
.of( idx_genome )
.set { genome_indexed_input }
mapping_withindex(genome_indexed_input.collect(), fastp.out.fastq)
htseq_count(mapping_withindex.out.bam, gtf_file)
......
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