src/db_utils/*.py: modifications to add a column region in cin_gene_frequency to have the frequency of feature inside the entire genes, their introns and exons

db_utils/interactions/features_interactions.py: removal of completely overlapping anchors, genes and exons

db_utils/interactions/features_interactions.py: replace distance (null) with 0 for exons that have different IDs, but identical coordinates

db_utils/interactions/config_interactions.py: modifications to allow to add the distance between genes or exons in pairwise interactions

db_utils/db_creation.py: modifications to add the distance information in the tables cin_gene_interaction and cin_exon_interaction

features_interactions.py: modifications to add the distance between genes or exons in pairwise interactions

config_interactions.py: add couple_exon and couple_gene to store the final result of features_interactions.py

__main__.py: update to integrate the filling of cin_exon_interaction and cin_gene_interaction tables

src/db_utils/interactions/features_interactions.py: mojor modifications to speedup teh creation of interaction tables

src/db_utils/interactions/features_interactions.py: Creation of a function create_interaction_table that calls every other function from that file

src/db_utils/interactions/bedtools.py: creation of the required directory if they don't exist at the beginning of function 'main_bedtools'

src/db_utils/projects_metadata/get_fill_metadata.py: modification in launch_pmagicGEO_script function: we call subprocess.check_call instead of subprocess.check_output

src/db_utils/projects_metadata/get_fill_metadata.py: fix fill_projects_table to make it launch launch_pmagicGEO_script + pep8 modifications

src/db_utils/frequency_scripts/create_n_fill_exon_frequency_file.py : modification of compute_gene_orf_data to compute codon/aa/properties frequencies at gene level

src/db_utils/frequency_scripts/frequency_function.py: modification of frequencies for better performances

src/db_utils/frequency_scripts/config_freq.py: modification of iupac_dic variable : it links for each 'degenerated' nucleotides (SWKMRY) the nucleotides they can be

src/db_utils/frequency_scripts/create_n_fill_exon_frequency_file.py: fix multiprocess_freq_orf and compute_gene_orf_data function (rename the column new_freq to frequency) + fix of create_or_load_freq_table (concatenation of wrong tables to create the final gene frequency table) + columns adjustement in fill_frequency_tables

src/db_utils/frequency_scripts/create_n_fill_exon_frequency_file.py: fix fill_frequency_tables by creating theresults/frequencies directory it it doesn't exist