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LBMC
ReGArDS
ChIA-PET_network
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6e73fade89cfa018d0f988bc37aa7c921bd1c7ff
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chia-pet_network
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authors
fmortreu
fmortreu
hpolvech
hpolvech
Laurent Modolo
lmodolo
Matthaus Sirvent
msirvent
nfontrod
nfontrod
5 authors
Jan 25, 2021
src/find_interaction_cluster/clip_figures/clip_analyser.py: change in...
· 6e73fade
nfontrod
authored
4 years ago
6e73fade
src/download_encode_eclip/*.py: creation of a module used to download all the...
· f826d8d6
nfontrod
authored
4 years ago
f826d8d6
Jan 22, 2021
src/misc/: script that creates a table indicating the number of splicing lore,...
· 8cbc86a4
nfontrod
authored
4 years ago
8cbc86a4
Jan 21, 2021
src/find_interaction_cluster/community_figures/fig_functions.py: change in...
· b3e0d1a0
nfontrod
authored
4 years ago
b3e0d1a0
src/find_interaction_cluster/community_figures/fig_functions.py: fix make_barplot call
· cc0654d5
nfontrod
authored
4 years ago
cc0654d5
src/find_interaction_cluster/community_figures/__main__.py: add logit in docstring
· 94cc4d51
nfontrod
authored
4 years ago
94cc4d51
Jan 20, 2021
src/find_interaction_cluster/community_figures/fig_functions.py: change de...
· eadf270f
nfontrod
authored
4 years ago
eadf270f
src/find_interaction_cluster/clip_figures/clip_analyser.py: deletion of...
· 7cf05207
nfontrod
authored
4 years ago
7cf05207
src/find_interaction_cluster/community_figures/fig_functions.py: handles...
· 224fc9d0
nfontrod
authored
4 years ago
224fc9d0
src/find_interaction_cluster/clip_figures/__main__.py: add sl_reg parameter
· 39e627ae
nfontrod
authored
4 years ago
39e627ae
src/find_interaction_cluster/clip_figures/clip_analyser.py: add sl_reg parameter
· c06baf31
nfontrod
authored
4 years ago
c06baf31
Jan 19, 2021
src/find_interaction_cluster/clip_figures/clip_compo_analyser.py: fix...
· 0effc7d1
nfontrod
authored
4 years ago
0effc7d1
src/find_interaction_cluster/clip_figures/clip_compo_*.py: add a parameter display_size
· b7c8f6cd
nfontrod
authored
4 years ago
b7c8f6cd
src/find_interaction_cluster/clip_figures/__main__.py: add 3 new parameters:...
· 8e2676a1
nfontrod
authored
4 years ago
8e2676a1
src/find_interaction_cluster/clip_figures/clip_analyser.py: add 3 new...
· a99a462f
nfontrod
authored
4 years ago
a99a462f
src/find_interaction_cluster/nt_and_community.py: fix create_outfiles function
· 4a9ae1f4
nfontrod
authored
4 years ago
4a9ae1f4
src/find_interaction_cluster/__main__.py: add display_size parameter
· 1bb5612d
nfontrod
authored
4 years ago
1bb5612d
src/find_interaction_cluster/nt_and_community.py: add 2 new parameters to...
· d8c9d672
nfontrod
authored
4 years ago
d8c9d672
src/find_interaction_cluster/community_finder.py: call get_community -> get_communities_basefile
· 3edbe8a3
nfontrod
authored
4 years ago
3edbe8a3
src/find_interaction_cluster/sf_and_communities.py: call get_community -> get_communities_basefile
· b76ca88f
nfontrod
authored
4 years ago
b76ca88f
tests/files/test_community_file.txt: creation of a test community file
· 6466b0ef
nfontrod
authored
4 years ago
6466b0ef
src/find_interaction_cluster/config.py: get_community ->...
· 92b7dca7
nfontrod
authored
4 years ago
92b7dca7
tests/files/SF_test_bar.txt: a clip test files
· 3919c987
nfontrod
authored
4 years ago
3919c987
Jan 18, 2021
src/find_interaction_cluster/community_figures/fig_functions.py: change in...
· a1f2fb6b
nfontrod
authored
4 years ago
a1f2fb6b
src/find_interaction_cluster/community_figures/*.py: can now perform logit tests
· 3c50729f
nfontrod
authored
4 years ago
3c50729f
src/find_interaction_cluster/community_figures/*.py: add a paramter...
· a90c69e7
nfontrod
authored
4 years ago
a90c69e7
Jan 15, 2021
src/find_interaction_cluster/clip_figures/clip_compo_analyser.py: fix...
· a072ad25
nfontrod
authored
4 years ago
a072ad25
src/find_interaction_cluster/clip_figures/clip_compo_launcher.py: add launcher...
· ef79642f
nfontrod
authored
4 years ago
ef79642f
Jan 13, 2021
src/find_interaction_cluster/clip_figures/clip_compo_analyser.py: launch...
· 5a4fb522
nfontrod
authored
4 years ago
5a4fb522
src/find_interaction_cluster/clip_figures/clip_compo_*: creation of a script...
· 496626e8
nfontrod
authored
4 years ago
496626e8
src/find_interaction_cluster/clip_figures/__main__.py: add a parameter permutation
· b01ba86e
nfontrod
authored
4 years ago
b01ba86e
src/find_interaction_cluster/clip_figures/clip_analyser.py: add a parameter iteration
· fece3a1d
nfontrod
authored
4 years ago
fece3a1d
src/find_interaction_cluster/clip_figures/config.py: add parameter test_clip_file
· e5ad126c
nfontrod
authored
4 years ago
e5ad126c
src/find_interaction_cluster/community_figures/fig_functions.py: add reg-adj...
· 02f9d6b8
nfontrod
authored
4 years ago
02f9d6b8
src/find_interaction_cluster/clip_figures/clip_analyser.py: analyse now the clip density
· fbb7ac9b
nfontrod
authored
4 years ago
fbb7ac9b
Jan 12, 2021
src/find_interaction_cluster/clip_figures/*.py: creation of a module to...
· 706d947a
nfontrod
authored
4 years ago
706d947a
src/find_interaction_cluster/community_figures/fig_functions.py: closing...
· c4cad384
nfontrod
authored
4 years ago
c4cad384
.gitignore: add some files to ignore in tests folder
· a3e79436
nfontrod
authored
4 years ago
a3e79436
tests: test directory
· 04ff702c
nfontrod
authored
4 years ago
04ff702c
src/db_utils/config.py: add a test_files attribute for Config class
· e470b4f3
nfontrod
authored
4 years ago
e470b4f3
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