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Commit fa307c4e authored by nfontrod's avatar nfontrod
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README.md: update

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...@@ -19,6 +19,16 @@ This project requires `python>=3.8` to work correctly and the following modules ...@@ -19,6 +19,16 @@ This project requires `python>=3.8` to work correctly and the following modules
* seaborn>=0.10.1 * seaborn>=0.10.1
* matplotlib>=3.1.2 * matplotlib>=3.1.2
## Build the Sphinx documentation
The documentation was build using `Sphinx`.
To build the documentation (which contains this document and the Api of the program), go in the doc folder and enter:
```console
$ make html
```
## Usage ## Usage
### `gc_content` module ### `gc_content` module
...@@ -105,4 +115,4 @@ The figure to give to the `--norm` parameter must be defined like this: ...@@ -105,4 +115,4 @@ The figure to give to the `--norm` parameter must be defined like this:
* The column condition must contain the same conditions defined in the `condition` column of the design file. * The column condition must contain the same conditions defined in the `condition` column of the design file.
* The column replicate must contain the same replicates names in the `replicate` column of the design file. * The column replicate must contain the same replicates names in the `replicate` column of the design file.
* The column coef contain a value used to normalise the coverage * The column coef contain a value used to normalise the coverage
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