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Commit 4c0b11d0 authored by nfontrod's avatar nfontrod
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src/bed_handler/select_regulated_near_ctcf_exons.py: pep8 modifications

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src/bed_handler/select_regulated_near_ctcf_exons.py
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...@@ -168,11 +168,13 @@ def create_bed_ctcf_exon(reg: str, threshold: int, ...@@ -168,11 +168,13 @@ def create_bed_ctcf_exon(reg: str, threshold: int,
df_exon = filter_bed(BedConfig.exon_bed, list_exons) df_exon = filter_bed(BedConfig.exon_bed, list_exons)
df_gene = filter_bed(BedConfig.gene_bed, list_genes) df_gene = filter_bed(BedConfig.gene_bed, list_genes)
df_exon.to_csv(BedConfig.bed.output / df_exon.to_csv(BedConfig.bed.output /
f"{name_near}CTCF_{threshold}_{location}_ddx_{reg}_{i0}_exon.bed", f"{name_near}CTCF_{threshold}_{location}_ddx_"
f"{reg}_{i0}_exon.bed",
sep="\t", sep="\t",
index=False) index=False)
df_gene.to_csv(BedConfig.bed.output / df_gene.to_csv(BedConfig.bed.output /
f"{name_near}CTCF_{threshold}_{location}_ddx_{reg}_{i0}_gene.bed", f"{name_near}CTCF_{threshold}_{location}_ddx_"
f"{reg}_{i0}_gene.bed",
sep="\t", sep="\t",
index=False) index=False)
......
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