From 4c0b11d04480e9aeac23664be55fd40a652a2f31 Mon Sep 17 00:00:00 2001
From: Fontrodona Nicolas <nicolas.fontrodona@ens-lyon.fr>
Date: Wed, 4 Nov 2020 15:55:37 +0100
Subject: [PATCH] src/bed_handler/select_regulated_near_ctcf_exons.py: pep8
modifications
---
src/bed_handler/select_regulated_near_ctcf_exons.py | 6 ++++--
1 file changed, 4 insertions(+), 2 deletions(-)
diff --git a/src/bed_handler/select_regulated_near_ctcf_exons.py b/src/bed_handler/select_regulated_near_ctcf_exons.py
index 6894170..a5a1e88 100644
--- a/src/bed_handler/select_regulated_near_ctcf_exons.py
+++ b/src/bed_handler/select_regulated_near_ctcf_exons.py
@@ -168,11 +168,13 @@ def create_bed_ctcf_exon(reg: str, threshold: int,
df_exon = filter_bed(BedConfig.exon_bed, list_exons)
df_gene = filter_bed(BedConfig.gene_bed, list_genes)
df_exon.to_csv(BedConfig.bed.output /
- f"{name_near}CTCF_{threshold}_{location}_ddx_{reg}_{i0}_exon.bed",
+ f"{name_near}CTCF_{threshold}_{location}_ddx_"
+ f"{reg}_{i0}_exon.bed",
sep="\t",
index=False)
df_gene.to_csv(BedConfig.bed.output /
- f"{name_near}CTCF_{threshold}_{location}_ddx_{reg}_{i0}_gene.bed",
+ f"{name_near}CTCF_{threshold}_{location}_ddx_"
+ f"{reg}_{i0}_gene.bed",
sep="\t",
index=False)
--
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