Commits · b43a5a48cb953afedc1db582b2812fd8003a9cfb · LBMC / nextflow · GitLab

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Nov 06, 2019
- conda_psmn: fix path of the scripts in configs files · b43a5a48
  Laurent Modolo authored 5 years ago
  
  Unverified
  
  b43a5a48
- nf: change psmn config to use conda · e58b21b6
  Laurent Modolo authored 5 years ago
  
  Unverified
  
  e58b21b6
Nov 05, 2019
- singularity: update configs to use docker hub and specified cacheDir · 0d93daf3
  Laurent Modolo authored 5 years ago
  
  Unverified
  
  0d93daf3
- docker: change config file to use lbmc/ docker repository · 3ced2125
  Laurent Modolo authored 5 years ago
  
  Unverified
  
  3ced2125
May 21, 2019
- nf modules singularity: remove logs for in2p3 · f8fe5b84
  Laurent Modolo authored 5 years ago
  
  Verified
  
  f8fe5b84
May 20, 2019
- nf modules: adapt ccin2p3 profile to use singularity · 6cccaa96
  Laurent Modolo authored 5 years ago
  
  Verified
  
  6cccaa96
- nf modules: add ccin2p3 profile · e170dad3
  Laurent Modolo authored 5 years ago
  
  Verified
  
  e170dad3
- nf module: ccin2p3 profile become cc2inp3_conda · 78189351
  Laurent Modolo authored 5 years ago
  
  Verified
  
  78189351
May 15, 2019
- fix ccin2p3 profile for loading miniconda3 · 565ffad2
  Laurent Modolo authored 5 years ago
  
  Verified
  
  565ffad2
May 07, 2019
- nf_modules: update ccin2p3 config · 99eb8705
  Laurent Modolo authored 5 years ago
  
  Verified
  
  99eb8705
Apr 16, 2019
- deeptools: add in2p3 config · 1e4f4848
  Laurent Modolo authored 5 years ago
  
  Verified
  
  1e4f4848
- change .sif to .img for singularity img · a972f993
  Laurent Modolo authored 5 years ago
  
  Verified
  
  a972f993
Mar 22, 2019
- psmn: remove mail report from config files · 016b5b22
  Laurent Modolo authored 6 years ago
  
  Unverified
  
  016b5b22
Mar 06, 2019
- deeptools: add singularity to files · dde8e8a2
  Laurent Modolo authored 6 years ago
  
  Unverified
  
  dde8e8a2
- nf_modules: update config files to match psmn lowercase module names · 80b5c871
  Laurent Modolo authored 6 years ago
  
  Unverified
  
  80b5c871
Mar 04, 2019
- rename module to lowercase · 231fd9e6
  Laurent Modolo authored 6 years ago
  
  v0.2.8 Verified
  
  231fd9e6
Dec 19, 2018
- deepTools: add plot_profile module · 3fede7c6
  Laurent Modolo authored 6 years ago
  
  Unverified
  
  3fede7c6
- deepTools: add compute_matrix module · b25a6418
  Laurent Modolo authored 6 years ago
  
  Unverified
  
  b25a6418
- nf_modules: fix withname -> withName in config files · 85a68216
  Laurent Modolo authored 6 years ago
  
  Unverified
  
  85a68216
Oct 26, 2018
- nf modules config: remove cpus info · 03f44eef
  Laurent Modolo authored 6 years ago
  
  Unverified
  
  03f44eef
Oct 24, 2018
- add clusterOption for psmn to all config files · e057e9a1
  Laurent Modolo authored 6 years ago
  
  Unverified
  
  e057e9a1
Oct 23, 2018
- RSEM: nf update indexing config for psmn · c95c7e0c
  Laurent Modolo authored 6 years ago
  
  Unverified
  
  c95c7e0c
- nf config file update nf syntax for process · 3e2c83f3
  Laurent Modolo authored 6 years ago
  
  Unverified
  
  3e2c83f3
- nf config: rename sge to psmn · fa486dc6
  Laurent Modolo authored 6 years ago
  
  Unverified
  
  fa486dc6
Aug 22, 2018
- RSEM: update nf structure · a4a0d6f0
  Laurent Modolo authored 6 years ago
  
  Verified
  
  a4a0d6f0
Jun 05, 2018
- mv nf files to nf_modules · 705226a9
  Laurent Modolo authored 6 years ago
  
  Verified
  
  705226a9
- correctly mv nf_modules · 4fa9a1b1
  Laurent Modolo authored 6 years ago
  
  Verified
  
  4fa9a1b1
- mv nf_modules to docker_modules · f51bf1e4
  Laurent Modolo authored 6 years ago
  
  Verified
  
  f51bf1e4
- RSEM: fix dockerfile and add nf and test files · 4d8776b9
  Laurent Modolo authored 6 years ago
  
  Verified
  
  4d8776b9
Jun 04, 2018
- Bowtie2: config fix module name · 018f08c7
  Laurent Modolo authored 6 years ago
  
  Verified
  
  018f08c7
- Bowtie2: add nf files and tests · 786e69de
  Laurent Modolo authored 6 years ago
  
  Verified
  
  786e69de