Commits · 9f7c81b715e901b05257c551cc39eb25ffb38801 · LBMC / nextflow · GitLab

Snippets Groups Projects

Oct 04, 2021
- emase-zero: remove personalized gene_to_transcript file · 1fd19b76
  Laurent Modolo authored 3 years ago
  
  1fd19b76
- emase-zero: fix stderr redirection · 8c4b0d09
  Laurent Modolo authored 3 years ago
  
  8c4b0d09
Oct 01, 2021
- emase-zero: fix output redirection · d8c768ae
  Laurent Modolo authored 3 years ago
  
  d8c768ae
- emase-zero: redirect all output to report file · 0212e0cb
  Laurent Modolo authored 3 years ago
  
  0212e0cb
- emase-zero: update error handling · 3cc41591
  Laurent Modolo authored 3 years ago
  
  3cc41591
- emase-zero: fix gene_to_transcript file to add strain info to gene name · 3ed5a9ca
  Laurent Modolo authored 3 years ago
  
  3ed5a9ca
Sep 30, 2021
- emase-zero.nf: change cardinality of the inputs · 231d2aaf
  Laurent Modolo authored 3 years ago
  
  231d2aaf
Aug 24, 2021
- emase-zero.nf: fix typo :53 and :55 · 9bc7e4c1
  Laurent Modolo authored 3 years ago
  
  9bc7e4c1
Aug 23, 2021
- emase-zero: replace file_prefix by file_id · a8c8f525
  Laurent Modolo authored 3 years ago
  
  a8c8f525
Aug 20, 2021
- emase-zero.nf: fix output path · 761843cc
  Laurent Modolo authored 3 years ago
  
  761843cc
- emase-zero: redirect stdrr to report file · 76661338
  Laurent Modolo authored 3 years ago
  
  76661338
- emase-zero.nf: fix typo :47 · bfa37a10
  Laurent Modolo authored 3 years ago
  
  bfa37a10
Aug 19, 2021
- emase-zero: filter g2tr list from sequence name in the fasta · 531b30b6
  Laurent Modolo authored 3 years ago
  
  531b30b6
- emase-zero: fix typo :21 · fdacd794
  Laurent Modolo authored 3 years ago
  
  fdacd794
- emase-zero: use g2tr instean of tr2g · 950ec4b3
  Laurent Modolo authored 3 years ago
  
  950ec4b3
Aug 18, 2021
- emase-zero: change ${bin} argument · 451b7da0
  Laurent Modolo authored 3 years ago
  
  451b7da0
May 31, 2021
- emase-zero: remove collect() :20 · d22860c2
  Laurent Modolo authored 4 years ago
  
  d22860c2
- emaze: change input to follow change to t2g in kb main.nf · 9293f190
  Laurent Modolo authored 4 years ago
  
  9293f190
May 26, 2021
- emaze: change imput from gtf to fasta to compute transcript length · 4eef1122
  Laurent Modolo authored 4 years ago
  
  4eef1122
May 06, 2021
- emase-zero: change bam to bam_idx · 833c88f7
  Laurent Modolo authored 4 years ago
  
  833c88f7
May 05, 2021
- emase-zero: change gtf to bam cardinality to 1 to 1 · 7ccc789d
  Laurent Modolo authored 4 years ago
  
  7ccc789d
Apr 29, 2021
- emaze-zero: fix 2nd typo :21... · c91b17fb
  Laurent Modolo authored 4 years ago
  
  c91b17fb
- emase-zero: fix typo :21 · 5587bc1d
  Laurent Modolo authored 4 years ago
  
  5587bc1d
- emase-zero: fix channel cardiality · 7101af2c
  Laurent Modolo authored 4 years ago
  
  7101af2c
- emaze-zero: integrate alntools into named workflow · e94feb6f
  Laurent Modolo authored 4 years ago
  
  e94feb6f
- emase-zero: add count workflow · 3dcea22e
  Laurent Modolo authored 4 years ago
  
  3dcea22e