nextflow.config: change ccin2p3 to slurm

src/nextflow.config

@@ -128,25 +128,23 @@ profiles {
     singularity.cacheDir = "$baseDir/.singularity_in2p3/"
     singularity.runOptions = "--bind /pbs,/sps,/scratch"
     process{
-      errorStrategy = { sleep(Math.pow(2, task.attempt) * 200 as long); return 'retry' }
       maxRetries = 3
       withLabel: big_mem_mono_cpus {
         scratch = true
         stageInMode = "copy"
         stageOutMode = "rsync"
-        executor = "sge"
-        clusterOptions = "-P P_lbmc -l os=cl7 -l sps=1 -r n"
+        executor = "slurm"
+        clusterOptions = "--partition=htc --licenses=sps"
         cpus = 1
         memory = "8GB"
-        queue = "huge"
       }
       withLabel: big_mem_multi_cpus {
         container = "lbmc/urqt:d62c1f8"
         scratch = true
         stageInMode = "copy"
         stageOutMode = "rsync"
-        executor = "sge"
-        clusterOptions = "-P P_lbmc -l os=cl7 -l sps=1 -r n"
+        executor = "slurm"
+        clusterOptions = "--partition=htc --licenses=sps"
         cpus = 1
         memory = "8GB"
         queue = "huge"
@@ -155,22 +153,20 @@ profiles {
         scratch = true
         stageInMode = "copy"
         stageOutMode = "rsync"
-        executor = "sge"
-        clusterOptions = "-P P_lbmc -l os=cl7 -l sps=1 -r n"
+        executor = "slurm"
+        clusterOptions = "--partition=htc --licenses=sps"
         cpus = 1
         memory = "8GB"
-        queue = "huge"
       }
       withLabel: small_mem_multi_cpus {
         container = "lbmc/urqt:d62c1f8"
         scratch = true
         stageInMode = "copy"
         stageOutMode = "rsync"
-        executor = "sge"
-        clusterOptions = "-P P_lbmc -l os=cl7 -l sps=1 -r n"
+        executor = "slurm"
+        clusterOptions = "--partition=htc --licenses=sps"
         cpus = 1
         memory = "8GB"
-        queue = "huge"
       }
     }
   }