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Verified Commit b7d9581d authored by Laurent Modolo's avatar Laurent Modolo
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test in2p3: add more details in mail report

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...@@ -26,4 +26,4 @@ CONFIG=${SCRATCH}/nextflow/src/nf_modules/kallisto/indexing.config ...@@ -26,4 +26,4 @@ CONFIG=${SCRATCH}/nextflow/src/nf_modules/kallisto/indexing.config
${NF} ${PIPELINE} -c ${CONFIG} -profile ccin2p3_singularity \ ${NF} ${PIPELINE} -c ${CONFIG} -profile ccin2p3_singularity \
--fasta "${SCRATCH}/nextflow/data/tiny_dataset/fasta/tiny_v2.fasta" \ --fasta "${SCRATCH}/nextflow/data/tiny_dataset/fasta/tiny_v2.fasta" \
-w "${SCRATCH}" -w "${SCRATCH}" -ansi-log false
...@@ -59,7 +59,7 @@ profiles { ...@@ -59,7 +59,7 @@ profiles {
stageOutMode = "rsync" stageOutMode = "rsync"
executor = "sge" executor = "sge"
clusterOptions = "-P P_lbmc -l os=cl7 -l sps=1 -r n \ clusterOptions = "-P P_lbmc -l os=cl7 -l sps=1 -r n \
-o ~/logs/ -e ~/logs/" -o ~/logs/ -e ~/logs/ -M laurent.modolo@ens-lyon.fr -m beas"
cpus = 1 cpus = 1
queue = 'huge' queue = 'huge'
} }
......
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