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Verified Commit a567c6aa authored by Laurent Modolo's avatar Laurent Modolo
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bedtools: update in2p3 config

parent e16a1a9f
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......@@ -32,4 +32,19 @@ profiles {
}
}
}
ccin2p3 {
process{
withName: fasta_from_bed {
beforeScript = "PATH=/sps/lbmc/common/nextflow/src/singularity_modules/bedtools/2.25.0/:/usr/bin:$PATH"
scratch = true
stageInMode = "copy"
stageOutMode = "rsync"
executor = "sge"
clusterOptions = "-P P_lbmc -l os=cl7 -l sps=1 -r n"
cpus = 1
memory = "10GB"
time = "24h"
}
}
}
}
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