add .sh helpers for singularity on the ccin2p3

src/singularity_modules/kallisto/0.43.1/kallisto

+#/bin/bash
+singularity exec /sps/lbmc/common/singularity/kallisto:0.43.1.img kallisto $@

src/singularity_modules/macs2/2.1.2/macs2

+#/bin/bash
+singularity exec /sps/lbmc/common/singularity/macs2:2.1.2.img macs2 $@

src/singularity_modules/multiqc/1.0/multiqc

+#/bin/bash
+singularity exec /sps/lbmc/common/singularity/multiqc:1.0.img multiqc $@

src/singularity_modules/multiqc/1.7/multiqc

+#/bin/bash
+singularity exec /sps/lbmc/common/singularity/multiqc:1.7.img multiqc $@

src/singularity_modules/music/6613c53/music

+#/bin/bash
+singularity exec /sps/lbmc/common/singularity/music:6613c53.img music $@

src/singularity_modules/picard/2.18.11/picard

+#/bin/bash
+singularity exec /sps/lbmc/common/singularity/picard:2.18.11.img picard $@

src/singularity_modules/pigz/2.4/pigz

+#/bin/bash
+singularity exec /sps/lbmc/common/singularity/pigz:2.4.img pigz $@

src/singularity_modules/rsem/1.3.0/rsem

+#/bin/bash
+singularity exec /sps/lbmc/common/singularity/rsem:1.3.0.img rsem $@

src/singularity_modules/salmon/0.8.2/salmon

+#/bin/bash
+singularity exec /sps/lbmc/common/singularity/salmon:0.8.2.img salmon $@

src/singularity_modules/sambamba/0.6.7/sambamba

+#/bin/bash
+singularity exec /sps/lbmc/common/singularity/sambamba:0.6.7.img sambamba $@

src/singularity_modules/samblaster/0.1.24/samblaster

+#/bin/bash
+singularity exec /sps/lbmc/common/singularity/samblaster:0.1.24.img samblaster $@

src/singularity_modules/samtools/1.7/samtools

+#/bin/bash
+singularity exec /sps/lbmc/common/singularity/samtools:1.7.img samtools $@

src/singularity_modules/sratoolkit/2.8.2/sratoolkit

+#/bin/bash
+singularity exec /sps/lbmc/common/singularity/sratoolkit:2.8.2.img sratoolkit $@

src/singularity_modules/subread/1.6.4/subread

+#/bin/bash
+singularity exec /sps/lbmc/common/singularity/subread:1.6.4.img subread $@

src/singularity_modules/tophat/2.1.1/tophat

+#/bin/bash
+singularity exec /sps/lbmc/common/singularity/tophat:2.1.1.img tophat $@

src/singularity_modules/trimmomatic/0.36/trimmomatic

+#/bin/bash
+singularity exec /sps/lbmc/common/singularity/trimmomatic:0.36.img trimmomatic $@

src/singularity_modules/ucsc/375/ucsc

+#/bin/bash
+singularity exec /sps/lbmc/common/singularity/ucsc:375.img ucsc $@

src/singularity_modules/umi_tools/1.0.0/umi_tools

+#/bin/bash
+singularity exec /sps/lbmc/common/singularity/umi_tools:1.0.0.img umi_tools $@

src/singularity_modules/urqt/d62c1f8/urqt

+#/bin/bash
+singularity exec /sps/lbmc/common/singularity/urqt:d62c1f8.img urqt $@