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Commit 7a9844b5 authored by elabaron's avatar elabaron
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tophat dockerfile : fix beug and add bowtie1 installation

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1 merge request!21tophat dockerfile : fix beug and add bowtie1 installation
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src/.docker_modules/tophat/2.1.1/Dockerfile
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...@@ -2,8 +2,10 @@ FROM ubuntu:18.04 ...@@ -2,8 +2,10 @@ FROM ubuntu:18.04
MAINTAINER Laurent Modolo MAINTAINER Laurent Modolo
ENV TOPHAT_VERSION=2.1.1 ENV TOPHAT_VERSION=2.1.1
ENV PACKAGES tophat=${BOWTIE2_VERSION}* ENV PACKAGES tophat=${TOPHAT_VERSION}*\
bowtie=1.2.2*\
libsys-hostname-long-perl
RUN apt-get update && \ RUN apt-get update && \
apt-get install -y --no-install-recommends ${PACKAGES} && \ apt-get install -y --no-install-recommends ${PACKAGES} && \
apt-get clean apt-get clean
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