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Unverified Commit 46f9f194 authored by Laurent Modolo's avatar Laurent Modolo
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conda_packages.sh: add gatk4

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src/.conda_packages.sh
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...@@ -78,6 +78,9 @@ fi ...@@ -78,6 +78,9 @@ fi
if [ ! -d ${CONDA_ENVS}gatk_3.8 ]; then if [ ! -d ${CONDA_ENVS}gatk_3.8 ]; then
conda create --yes --name gatk_3.8 gatk=3.8 conda create --yes --name gatk_3.8 gatk=3.8
fi fi
if [ ! -d ${CONDA_ENVS}gatk_4.0.8.1 ]; then
conda create --yes --name gatk_4.0.8.1 gatk4=4.0.8.1-0
fi
if [ ! -d ${CONDA_ENVS}cutadapt_1.14 ]; then if [ ! -d ${CONDA_ENVS}cutadapt_1.14 ]; then
conda create --yes --name cutadapt_1.14 cutadapt=1.14 conda create --yes --name cutadapt_1.14 cutadapt=1.14
fi fi
......
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