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Commit 660a20a0 authored by nservant's avatar nservant
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fix conda

parent 730657a7
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......@@ -7,4 +7,4 @@ RUN apt-get update && apt-get install -y gcc g++ && apt-get clean -y
COPY environment.yml /
RUN conda env create -f /environment.yml && conda clean -a
ENV PATH /opt/conda/envs/nf-core-hic-1.1.0dev/bin:$PATH
ENV PATH /opt/conda/envs/nf-core-hic-1.1.0/bin:$PATH
......@@ -4,7 +4,6 @@ name: nf-core-hic-1.1.0
channels:
- conda-forge
- bioconda
- bioconda/label/cf201901
- defaults
dependencies:
- python=2.7.15
......@@ -13,7 +12,7 @@ dependencies:
- numpy=1.16.3
- r-markdown=0.9
- bx-python=0.8.2
- pysam=0.15.2
- bioconda::pysam=0.15.2
- cooler=0.8.5
- bowtie2=2.3.5
- samtools=1.9
......
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