add reporting

main.nf

@@ -254,8 +254,12 @@ summary['Pipeline Version'] = workflow.manifest.version
 summary['Run Name']         = custom_runName ?: workflow.runName
 
 summary['Reads']            = params.reads
+summary['splitFastq']       = params.splitFastq
 summary['Fasta Ref']        = params.fasta
-
+summary['Ligation Motif']   = params.ligation_site
+summary['DNase Mode']       = params.dnase
+summary['Remove Dup']       = params.rm_dup
+summary['Maps resolution']  = params.bin_size
 
 summary['Max Memory']       = params.max_memory
 summary['Max CPUs']         = params.max_cpus
@@ -263,7 +267,8 @@ summary['Max Time']     = params.max_time
 summary['Output dir']       = params.outdir
 summary['Working dir']      = workflow.workDir
 summary['Container Engine'] = workflow.containerEngine
-if(workflow.containerEngine) summary['Container'] = workflow.container
+if(workflow.containerEngine) 
+   summary['Container']     = workflow.container
 summary['Current home']     = "$HOME"
 summary['Current user']     = "$USER"
 summary['Current path']     = "$PWD"