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Unverified Commit 0ab23187 authored by Nicolas Servant's avatar Nicolas Servant Committed by GitHub
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Update modules/local/hicpro/bowtie2_merge.nf 


Co-authored-by: default avatarEdmund Miller <edmund.a.miller@gmail.com>
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modules/local/hicpro/bowtie2_merge.nf
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...@@ -24,7 +24,7 @@ process MERGE_BOWTIE2{ ...@@ -24,7 +24,7 @@ process MERGE_BOWTIE2{
${bam1} ${bam2} ${bam1} ${bam2}
samtools sort -@ ${task.cpus} -m 800M \\ samtools sort -@ ${task.cpus} -m 800M \\
-n \\ -n \\
-o ${prefix}_bwt2merged.sorted.bam \\ -o ${prefix}_bwt2merged.sorted.bam \\
${prefix}_bwt2merged.bam ${prefix}_bwt2merged.bam
......
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