From 0ab23187df6d6abf685e7d94e45bf6c45ef22c9b Mon Sep 17 00:00:00 2001
From: Nicolas Servant <nicolas.servant@curie.fr>
Date: Mon, 9 May 2022 07:40:19 +0200
Subject: [PATCH] Update modules/local/hicpro/bowtie2_merge.nf
Co-authored-by: Edmund Miller <edmund.a.miller@gmail.com>
---
modules/local/hicpro/bowtie2_merge.nf | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/modules/local/hicpro/bowtie2_merge.nf b/modules/local/hicpro/bowtie2_merge.nf
index 752966d..ed200d6 100644
--- a/modules/local/hicpro/bowtie2_merge.nf
+++ b/modules/local/hicpro/bowtie2_merge.nf
@@ -24,7 +24,7 @@ process MERGE_BOWTIE2{
${bam1} ${bam2}
samtools sort -@ ${task.cpus} -m 800M \\
- -n \\
+ -n \\
-o ${prefix}_bwt2merged.sorted.bam \\
${prefix}_bwt2merged.bam
--
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