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Commit feb32fb7 authored by Hakan Ozadam's avatar Hakan Ozadam
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added nextflow.config

parent 041139d5
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includeConfig 'VERSION'
manifest {
homePage = 'https://github.com/ribosomeprofiling/riboflow'
mainScript = 'RIBOflow.groovy'
}
process.container = "ceniklab/riboflow:${version}"
process.shell = ['/bin/bash', '-uexo','pipefail']
// Uncomment this to disable caching in work/ folder.
// process.cache = false
profiles {
standard {
includeConfig './configs/local.config'
}
stampede_local {
includeConfig './configs/stampede_local.config'
}
docker_local {
includeConfig './configs/docker_local.config'
}
}
timeline {
enabled = true
file = "./nextflow_logs/timeline.html"
}
trace {
enabled = true
file = "./nextflow_logs/trace.txt"
}
report {
enabled = true
file = "./nextflow_logs/report.html"
}
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