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Commit b0f45d92 authored by elabaron's avatar elabaron
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RNAseq.config : switch to conda load module for hisat2

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......@@ -23,8 +23,8 @@ profiles {
penv = 'openmp16'
}
withName: hisat2_human {
beforeScript = "source /usr/share/lmod/lmod/init/bash; module use ~/privatemodules"
module = "hisat2/2.1.0:samtools/1.7"
beforeScript = "source $baseDir/.conda_psmn.sh"
module = "$baseDir/.conda_envs/hisat2_2.1.0"
executor = "sge"
clusterOptions = "-cwd -V"
memory = "20GB"
......
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