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Commit 6b5ddbc8 authored by elabaron's avatar elabaron
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src/nextflow_template.sh : fix typo error

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src/nextflow_template.sh
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...@@ -8,9 +8,9 @@ nextflow src/RNAseq.nf -c src/RNAseq.config \ ...@@ -8,9 +8,9 @@ nextflow src/RNAseq.nf -c src/RNAseq.config \
--do_fastqc true\ --do_fastqc true\
--do_dedup true\ --do_dedup true\
--do_postgenome true\ --do_postgenome true\
--adaptorR1 = "AGATCGGAAGAGCACACGTCTGAACTCCAGTCA"\ --adaptorR1 "AGATCGGAAGAGCACACGTCTGAACTCCAGTCA"\
--adaptorR2 = "AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT"\ --adaptorR2 "AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT"\
--strand = "FR"\ --strand "FR"\
--fastq_raw "data/fastq/*{_R1,_R2}.fastq.gz"\ --fastq_raw "data/fastq/*{_R1,_R2}.fastq.gz"\
--output "results"\ --output "results"\
--filter "data/filter/*.bt2"\ --filter "data/filter/*.bt2"\
......
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