change -s option for no for RNAseq analysis of Andrea fatsq (project Strome with Valerie)

src/nf_modules/htseq/main.nf

@@ -36,7 +36,7 @@ process htseq_count {
 
   script:
 """
-htseq-count -n ${task.cpus} -r pos -a 10 -s reverse -t exon -i gene_id $bam $gtf_file > ${file_id}.tsv
+htseq-count -n ${task.cpus} -r pos -a 10 -s no -t exon -i gene_id $bam $gtf_file > ${file_id}.tsv
 """
 }