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Verified Commit 5ce7d804 authored by Laurent Modolo's avatar Laurent Modolo
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update path in sample.csv to abs path

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data/sample_mbelari.csv
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View file @ 5ce7d804
female1: data/Mbelari_females/1_S1_L001_R1_001.fastq ; data/Mbelari_females/1_S1_L001_R2_001.fastq
female2: data/Mbelari_females/2_S2_L001_R1_001.fastq ; data/Mbelari_females/2_S2_L001_R2_001.fastq
female3: data/Mbelari_females/3_S3_L001_R1_001.fastq ; data/Mbelari_females/3_S3_L001_R2_001.fastq
female4: data/Mbelari_females/4_S4_L001_R1_001.fastq ; data/Mbelari_females/4_S4_L001_R2_001.fastq
female5: data/Mbelari_females/5_S5_L001_R1_001.fastq ; data/Mbelari_females/5_S5_L001_R2_001.fastq
female6: data/Mbelari_females/6_S6_L001_R1_001.fastq ; data/Mbelari_females/6_S6_L001_R2_001.fastq
female7: data/Mbelari_females/MRDR5_R1.fastq ; data/Mbelari_females/MRDR5_R2.fastq
male1: /data/Mbelari_males/JU2817_males_S11_L002_R1_001.fastq ; /data/Mbelari_males/JU2817_males_S11_L002_R2_001.fastq
male2: /data/Mbelari_males/MRDR6_R1.fastq ; /data/Mbelari_males/MRDR6_R2.fastq
female1: /scratch/Bio/lmodolo/kmer_diff/data/Mbelari_females/1_S1_L001_R1_001.fastq ; /scratch/Bio/lmodolo/kmer_diff/data/Mbelari_females/1_S1_L001_R2_001.fastq
female2: /scratch/Bio/lmodolo/kmer_diff/data/Mbelari_females/2_S2_L001_R1_001.fastq ; /scratch/Bio/lmodolo/kmer_diff/data/Mbelari_females/2_S2_L001_R2_001.fastq
female3: /scratch/Bio/lmodolo/kmer_diff/data/Mbelari_females/3_S3_L001_R1_001.fastq ; /scratch/Bio/lmodolo/kmer_diff/data/Mbelari_females/3_S3_L001_R2_001.fastq
female4: /scratch/Bio/lmodolo/kmer_diff/data/Mbelari_females/4_S4_L001_R1_001.fastq ; /scratch/Bio/lmodolo/kmer_diff/data/Mbelari_females/4_S4_L001_R2_001.fastq
female5: /scratch/Bio/lmodolo/kmer_diff/data/Mbelari_females/5_S5_L001_R1_001.fastq ; /scratch/Bio/lmodolo/kmer_diff/data/Mbelari_females/5_S5_L001_R2_001.fastq
female6: /scratch/Bio/lmodolo/kmer_diff/data/Mbelari_females/6_S6_L001_R1_001.fastq ; /scratch/Bio/lmodolo/kmer_diff/data/Mbelari_females/6_S6_L001_R2_001.fastq
female7: /scratch/Bio/lmodolo/kmer_diff/data/Mbelari_females/MRDR5_R1.fastq ; /scratch/Bio/lmodolo/kmer_diff/data/Mbelari_females/MRDR5_R2.fastq
male1: //scratch/Bio/lmodolo/kmer_diff/data/Mbelari_males/JU2817_males_S11_L002_R1_001.fastq ; //scratch/Bio/lmodolo/kmer_diff/data/Mbelari_males/JU2817_males_S11_L002_R2_001.fastq
male2: //scratch/Bio/lmodolo/kmer_diff/data/Mbelari_males/MRDR6_R1.fastq ; //scratch/Bio/lmodolo/kmer_diff/data/Mbelari_males/MRDR6_R2.fastq
data/sample_mlongespiculosa.csv
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female1: data/Mlongespiculosa_females/MRDR3_R1.fastq ; data/Mlongespiculosa_females/MRDR3_R2.fastq
male1: /data/Mlongespiculosa_males/MRDR4_R1.fastq ; /data/Mlongespiculosa_males/MRDR4_R1.fastq
female1: /scratch/Bio/lmodolo/kmer_diff/data/Mlongespiculosa_females/MRDR3_R1.fastq ; /scratch/Bio/lmodolo/kmer_diff/data/Mlongespiculosa_females/MRDR3_R2.fastq
male1: //scratch/Bio/lmodolo/kmer_diff/data/Mlongespiculosa_males/MRDR4_R1.fastq ; //scratch/Bio/lmodolo/kmer_diff/data/Mlongespiculosa_males/MRDR4_R1.fastq
data/sample_mspiculigera.csv
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female1: data/Mspiculigera_females/AF72-females_BIS_S8_L002_R1_001.fastq ; data/Mspiculigera_females/AF72-females_BIS_S8_L002_R2_001.fastq
male1: /data/Mspiculigera_males/AF72-males_S7_L002_R1_001.fastq ; /data/Mspiculigera_males/AF72-males_S7_L002_R2_001.fastq
female1: /scratch/Bio/lmodolo/kmer_diff/data/Mspiculigera_females/AF72-females_BIS_S8_L002_R1_001.fastq ; /scratch/Bio/lmodolo/kmer_diff/data/Mspiculigera_females/AF72-females_BIS_S8_L002_R2_001.fastq
male1: //scratch/Bio/lmodolo/kmer_diff/data/Mspiculigera_males/AF72-males_S7_L002_R1_001.fastq ; //scratch/Bio/lmodolo/kmer_diff/data/Mspiculigera_males/AF72-males_S7_L002_R2_001.fastq
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