Commits · 854a17092c76f4611ef5679fac1eb0ef58ac3067 · Xavier Grand / ChIPster

"git@gitbio.ens-lyon.fr:xgrand/ChIPster.git" did not exist on "3ced2125795763aad94aea3b19eb96dbfdc2f518"

May 20, 2019
- in2p3: test singularity automount · 854a1709
  Laurent Modolo authored 5 years ago
  
  Verified
  
  854a1709
- in2p3 singularity: fix logs path · 9e61e551
  Laurent Modolo authored 5 years ago
  
  Verified
  
  9e61e551
- test in2p3: add more details in mail report · b7d9581d
  Laurent Modolo authored 5 years ago
  
  Verified
  
  b7d9581d
- singularity test at in2p3 · 803af8b7
  Laurent Modolo authored 5 years ago
  
  Verified
  
  803af8b7
May 15, 2019
- fix ccin2p3 profile for loading miniconda3 · 565ffad2
  Laurent Modolo authored 5 years ago
  
  Verified
  
  565ffad2
May 07, 2019
- nf_modules: update ccin2p3 config · 99eb8705
  Laurent Modolo authored 5 years ago
  
  Verified
  
  99eb8705
May 03, 2019
- kallisto: indexing config sh conda env instead of source · 3da0a73c
  Laurent Modolo authored 5 years ago
  
  Verified
  
  3da0a73c
- kallisto: indexing config add error log for in2p3 · 2547f52d
  Laurent Modolo authored 5 years ago
  
  Verified
  
  2547f52d
May 02, 2019
- nextflow: update in2p3 test for demon queue · bf418ede
  Laurent Modolo authored 5 years ago
  
  Verified
  
  bf418ede
Apr 16, 2019
- kallisto: try to remove option for in2p3 qsub · 6a9d1f73
  Laurent Modolo authored 5 years ago
  
  Verified
  
  6a9d1f73
- kallisto: index.config test mc_huge for indexing · 3cb0f062
  Laurent Modolo authored 5 years ago
  
  Verified
  
  3cb0f062
- kallisto: indexing.config add queue for in2p3 · aa5dbf3d
  Laurent Modolo authored 5 years ago
  
  Verified
  
  aa5dbf3d
- kallisto: add ccin2p3_conda profile for indexing · e069611c
  Laurent Modolo authored 5 years ago
  
  Verified
  
  e069611c
- kallisto: add in2p3 config · e16a1a9f
  Laurent Modolo authored 5 years ago
  
  Verified
  
  e16a1a9f
- change .sif to .img for singularity img · a972f993
  Laurent Modolo authored 5 years ago
  
  Verified
  
  a972f993
Apr 12, 2019
- kallisto: config for in2p3, add /usr/bin to path · e636850a
  Laurent Modolo authored 5 years ago
  
  Verified
  
  e636850a
- kallisto: remove bash config · 5fca29e5
  Laurent Modolo authored 5 years ago
  
  Verified
  
  5fca29e5
- kallisto: update in2p3 config · 2119e7bb
  Laurent Modolo authored 5 years ago
  
  Verified
  
  2119e7bb
- kallisto: add info for in2p3 scratch · e943bb11
  Laurent Modolo authored 5 years ago
  
  Verified
  
  e943bb11
- kallisto: test of in2p3 config file · 0304aca0
  Laurent Modolo authored 5 years ago
  
  Verified
  
  0304aca0
Mar 22, 2019
- psmn: remove mail report from config files · 016b5b22
  Laurent Modolo authored 6 years ago
  
  Unverified
  
  016b5b22
Mar 06, 2019
- nf_modules: add singularity in config files and tests.sh · f720ba52
  Laurent Modolo authored 6 years ago
  
  Unverified
  
  f720ba52
- nf_modules: update config files to match psmn lowercase module names · 80b5c871
  Laurent Modolo authored 6 years ago
  
  Unverified
  
  80b5c871
Mar 04, 2019
- rename module to lowercase · 231fd9e6
  Laurent Modolo authored 6 years ago
  
  v0.2.8 Verified
  
  231fd9e6
Oct 26, 2018
- nf modules config: remove cpus info · 03f44eef
  Laurent Modolo authored 6 years ago
  
  Unverified
  
  03f44eef
Oct 24, 2018
- add clusterOption for psmn to all config files · e057e9a1
  Laurent Modolo authored 6 years ago
  
  Unverified
  
  e057e9a1
Oct 23, 2018
- nf module: update executor from psmn to sge · 9fdc0424
  Laurent Modolo authored 6 years ago
  
  Unverified
  
  9fdc0424
- nf config: rename sge to psmn · fa486dc6
  Laurent Modolo authored 6 years ago
  
  Unverified
  
  fa486dc6
- Kallisto: update nf config for PSMN · 35e3593b
  Laurent Modolo authored 6 years ago
  
  Unverified
  
  35e3593b
Aug 22, 2018
- Kallisto: update nf structure · 0c1bbd59
  Laurent Modolo authored 6 years ago
  
  Verified
  
  0c1bbd59
- Cutadapt: update nf structure · b5d57719
  Laurent Modolo authored 6 years ago
  
  Verified
  
  b5d57719
Jun 06, 2018
- add sge config for some modules · 3454e1e8
  Laurent Modolo authored 6 years ago
  
  Verified
  
  3454e1e8
Jun 05, 2018
- mv nf files to nf_modules · 705226a9
  Laurent Modolo authored 6 years ago
  
  Verified
  
  705226a9
- correctly mv nf_modules · 4fa9a1b1
  Laurent Modolo authored 6 years ago
  
  Verified
  
  4fa9a1b1
- mv nf_modules to docker_modules · f51bf1e4
  Laurent Modolo authored 6 years ago
  
  Verified
  
  f51bf1e4
Jun 04, 2018
- fix docker configuration · b0a4d2c1
  Laurent Modolo authored 6 years ago
  
  Verified
  
  b0a4d2c1
Jun 01, 2018
- UrQt: add tests, nf and config · 86a16ba6
  Laurent Modolo authored 6 years ago
  
  Verified
  
  86a16ba6