.gitmodules

CHANGELOG.md

README.md

doc/available_tools.md

doc/nf_projects.md

src/.conda_packages.sh

src/.docker_modules/bcftools/1.7/docker_init.sh

src/.docker_modules/bedtools/2.25.0/docker_init.sh

src/.docker_modules/bioawk/1.0/docker_init.sh

src/.docker_modules/bowtie/1.2.2/docker_init.sh

src/.docker_modules/bowtie2/2.3.4.1/docker_init.sh

src/.docker_modules/bwa/0.7.17/Dockerfile

src/.docker_modules/bwa/0.7.17/docker_init.sh

src/.docker_modules/canu/1.6/docker_init.sh

src/.docker_modules/cutadapt/1.14/docker_init.sh

src/.docker_modules/cutadapt/1.15/docker_init.sh

src/.docker_modules/cutadapt/2.1/docker_init.sh

src/.docker_modules/deeptools/3.0.2/docker_init.sh

src/.docker_modules/deeptools/3.1.1/docker_init.sh

src/.docker_modules/docker_push.sh