Verified Commit 0c461dac authored by Laurent Modolo's avatar Laurent Modolo
Browse files

kb: fix cardinality for split() step

parent 3a878b65
......@@ -88,7 +88,7 @@ workflow count {
.set{ whitelist_optional }
switch(params.kb_protocol) {
case "marsseq":
split(fastq, config)
split(fastq, config.collect())
kb_marseq(index.collect(), split.out.fastq, transcript_to_gene.collect(), whitelist_optional.collect())
kb_marseq.out.counts.set{res_counts}
kb_marseq.out.report.set{res_report}
......@@ -280,7 +280,7 @@ workflow count_velocity {
.set{ whitelist_optional }
switch(params.kb_protocol) {
case "marsseq":
split(fastq, config)
split(fastq, config.collect())
velocity_marseq(index.collect(), split.out.fastq, transcript_to_gene.collect(), whitelist_optional.collect())
velocity_marseq.out.counts.set{res_counts}
velocity_marseq.out.report.set{res_report}
......
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