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vvanoost
nextflow
Commits
da24408fce8779a3fedfd3122fa2f012b65f532c
Select Git revision
3 results
nextflow
src
RNAseq_sen1D.nf
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authors
Laurent Modolo
lmodolo
vvanoost
vvanoost
2 authors
Jul 24, 2018
SAM tools
· da24408f
vvanoost
authored
6 years ago
da24408f
change SAM tools
· 5941bae1
vvanoost
authored
6 years ago
5941bae1
correct SAMtools implementation
· 53b91d03
vvanoost
authored
6 years ago
53b91d03
Add Ban sorting from SAMtools
· 67666918
vvanoost
authored
6 years ago
67666918
Jul 23, 2018
fix 4 at the beginning of process in .nf file
· ed687455
vvanoost
authored
6 years ago
ed687455
Add Bowtie 2 parameters to pipeline
· 2e246cff
vvanoost
authored
6 years ago
2e246cff
change params.fastq for bowtie2
· 8523d5f0
vvanoost
authored
6 years ago
8523d5f0
change cut to cut4 in trimming process
· 9a0dddaa
vvanoost
authored
6 years ago
9a0dddaa
amendments to cutadapt to remove adapters in 5' and 3' from R1 and R2
· 3eff3194
vvanoost
authored
6 years ago
3eff3194
rename RNAseq_sen1D
· f03d26c6
vvanoost
authored
6 years ago
f03d26c6
Jul 18, 2018
Add urqt to RNAseq_sen1∆.nf
· 4e063da0
vvanoost
authored
6 years ago
4e063da0
Update RNAseq sen1∆.nf
· 440083b2
vvanoost
authored
6 years ago
440083b2
modify params.fastq to include the .gz format and modify the output to include...
· ec41d5e0
vvanoost
authored
6 years ago
ec41d5e0
change adapter sequences for Nextflex 3' adapter
· 742e683a
vvanoost
authored
6 years ago
742e683a
Jun 07, 2018
paired.nf files : pass the pair_id information in output
· 5236de95
Laurent Modolo
authored
6 years ago
Verified
5236de95
Jun 05, 2018
mv nf files to nf_modules
· 705226a9
Laurent Modolo
authored
6 years ago
Verified
705226a9
correctly mv nf_modules
· 4fa9a1b1
Laurent Modolo
authored
6 years ago
Verified
4fa9a1b1
mv nf_modules to docker_modules
· f51bf1e4
Laurent Modolo
authored
6 years ago
Verified
f51bf1e4
Jun 01, 2018
cutadapt: add tests and config
· 2c488dbf
Laurent Modolo
authored
6 years ago
Verified
2c488dbf
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