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README.md 2.34 KiB

nextflow pipeline

This repository is a template and a library repository to help you build nextflow pipeline.

Getting Started

These instructions will get you a copy of the project up and running on your local machine for development and testing purposes. See deployment for notes on how to deploy the project on a live system.

Prerequisites

To run nextflow on you computer you need to have java (>= 1.8) installed.

java --version

To be able to easily test tools already implemented for nextflow on your computer (src/nf_modules/ to see their list). You need to have docker installed.

docker run hello-world

Installing