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Laurent Modolo's avatar
add dockerfile for Bowtie2:2.3.4.1
Laurent Modolo committed
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FROM ubuntu:18.04
MAINTAINER Laurent Modolo

ENV BOWTIE2_VERSION=2.3.4.1
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Bowtie2: add samtools to Dockerfile  
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ENV SAMTOOLS_VERSION=1.7
ENV PACKAGES bowtie2=${BOWTIE2_VERSION}* \
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Bowtie2: add perl dependency and fix single-end example  
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    samtools=${SAMTOOLS_VERSION}* \
    perl=5.26.1*
Laurent Modolo's avatar
add dockerfile for Bowtie2:2.3.4.1
Laurent Modolo committed
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RUN apt-get update && \
    apt-get install -y --no-install-recommends ${PACKAGES} && \
    apt-get clean