Commits · master · UE / UE NGS / App UE NGS IFB

Apr 29, 2025
- update · 6129cbde
  Carine Rey authored 2 days ago
  
  6129cbde
Mar 21, 2025
- update · 163ba770
  Carine Rey authored 1 month ago
  
  163ba770
Mar 19, 2025
- update rnaseq2025 · f6133048
  Carine Rey authored 1 month ago
  
  f6133048
- version uengs2024 · a2bc3056
  Carine Rey authored 1 month ago
  
  a2bc3056
Aug 20, 2024
- fix pb with no execution of bashrc · cd6abeb4
  Carine Rey authored 8 months ago
  
  cd6abeb4
- start image update · 89f63a4e
  Carine Rey authored 8 months ago
  
  89f63a4e
Mar 13, 2024
- reduce image space · 703643c9
  Carine Rey authored 1 year ago
  
  703643c9
- activate rnaseq env · 78fbd1be
  Carine Rey authored 1 year ago
  
  78fbd1be
- mv files that are no longer needed · 70be7f0e
  Carine Rey authored 1 year ago
  
  70be7f0e
- update 2024 · 015503bb
  Carine Rey authored 1 year ago
  
  - use micromamba - add env rnaseq
  015503bb
Aug 30, 2023
- add idr · a244966c
  Carine Rey authored 1 year ago
  
  a244966c
- add sambamba · cb8abec9
  Carine Rey authored 1 year ago
  
  cb8abec9
- fix ngs env acivation at start · 29c6efdb
  Carine Rey authored 1 year ago
  
  29c6efdb
Apr 18, 2023
- use mamba insteed of conda · e6a88524
  Carine Rey authored 2 years ago
  
  e6a88524
Apr 17, 2023
- reduce conda env · 54db0a02
  Carine Rey authored 2 years ago
  
  54db0a02
- fix R packages · 1244f05a
  Carine Rey authored 2 years ago
  
  1244f05a
- update · aa0260cb
  Carine Rey authored 2 years ago
  
  aa0260cb
- update version · 73ac72db
  Carine Rey authored 2 years ago
  
  73ac72db
- start update image from App ETBII Analyse Multivariee · cda98a3d
  Carine Rey authored 2 years ago
  
  - allow use of Rstudio and conda
  cda98a3d
Nov 03, 2022
- add cowsay in path · aea87c33
  Carine Rey authored 2 years ago
  
  aea87c33
Nov 02, 2022
- add cutadapt and mageck · 19c07c47
  Carine Rey authored 2 years ago
  
  19c07c47
Oct 20, 2022
- config vdb-config for sra toolkit · 0a664778
  Carine Rey authored 2 years ago
  
  0a664778
Oct 10, 2022
- add libgeos for seurat · ba60ba25
  Carine Rey authored 2 years ago
  
  ba60ba25
- update version · 224f97c9
  Carine Rey authored 2 years ago
  
  224f97c9
- update docker · 8ed0f487
  Carine Rey authored 2 years ago
  
  8ed0f487
Dec 14, 2021
- update · 54bbb95d
  Carine Rey authored 3 years ago
  
  54bbb95d
Nov 18, 2021
- typo · 20d2d532
  Carine Rey authored 3 years ago
  
  20d2d532
- add TRIMMOMATIC_JAR variable · f3f24af0
  Carine Rey authored 3 years ago
  
  f3f24af0
Nov 15, 2021
- try to fix link pb · c0baea2b
  Carine Rey authored 3 years ago
  
  c0baea2b
- fix cd & typo · 6cfa16ba
  Carine Rey authored 3 years ago
  
  6cfa16ba
- add a link to authorized key in the shared dir · 4be15e0c
  Carine Rey authored 3 years ago
  
  4be15e0c
Nov 12, 2021
- add hmmratac · 954bf2f6
  Carine Rey authored 3 years ago
  
  954bf2f6
Oct 19, 2021
- add libboost-filesystem-dev · a3116aaa
  Carine Rey authored 3 years ago
  
  a3116aaa
- add bioawk · 0dc8a547
  Carine Rey authored 3 years ago
  
  0dc8a547
Sep 15, 2021
- add parallel-fastq-dump · ec0c92fd
  Carine Rey authored 3 years ago
  
  ec0c92fd
Sep 14, 2021
- update v2021 · 34baa20d
  Carine Rey authored 3 years ago
  
  34baa20d
Sep 07, 2021
- start update for 2021 · a37de087
  Carine Rey authored 3 years ago
  
  - upgrade R (4.1.1) - add macs2
  a37de087
- change docker image host · 2cf1f4d9
  Carine Rey authored 3 years ago
  
  2cf1f4d9
- Update Dockerfile · f6436200
  Carine Rey authored 3 years ago
  
  f6436200
Oct 22, 2020
- add a command line for a local test · c93d7257
  Carine Rey authored 4 years ago
  
  c93d7257