Commits · master · UE / UE NGS / App UE NGS IFB

03 Nov, 2022 1 commit
- add cowsay in path · aea87c33
  Carine Rey authored Nov 03, 2022
  
  aea87c33
02 Nov, 2022 1 commit
- add cutadapt and mageck · 19c07c47
  Carine Rey authored Nov 02, 2022
  
  19c07c47
20 Oct, 2022 1 commit
- config vdb-config for sra toolkit · 0a664778
  Carine Rey authored Oct 20, 2022
  
  0a664778
10 Oct, 2022 3 commits
- add libgeos for seurat · ba60ba25
  Carine Rey authored Oct 10, 2022
  
  ba60ba25
- update version · 224f97c9
  Carine Rey authored Oct 10, 2022
  
  224f97c9
- update docker · 8ed0f487
  Carine Rey authored Oct 10, 2022
  
  8ed0f487
14 Dec, 2021 1 commit
- update · 54bbb95d
  Carine Rey authored Dec 14, 2021
  
  54bbb95d
18 Nov, 2021 2 commits
- typo · 20d2d532
  Carine Rey authored Nov 18, 2021
  
  20d2d532
- add TRIMMOMATIC_JAR variable · f3f24af0
  Carine Rey authored Nov 18, 2021
  
  f3f24af0
15 Nov, 2021 3 commits
- try to fix link pb · c0baea2b
  Carine Rey authored Nov 15, 2021
  
  c0baea2b
- fix cd & typo · 6cfa16ba
  Carine Rey authored Nov 15, 2021
  
  6cfa16ba
- add a link to authorized key in the shared dir · 4be15e0c
  Carine Rey authored Nov 15, 2021
  
  4be15e0c
12 Nov, 2021 1 commit
- add hmmratac · 954bf2f6
  Carine Rey authored Nov 12, 2021
  
  954bf2f6
19 Oct, 2021 2 commits
- add libboost-filesystem-dev · a3116aaa
  Carine Rey authored Oct 19, 2021
  
  a3116aaa
- add bioawk · 0dc8a547
  Carine Rey authored Oct 19, 2021
  
  0dc8a547
15 Sep, 2021 1 commit
- add parallel-fastq-dump · ec0c92fd
  Carine Rey authored Sep 15, 2021
  
  ec0c92fd
14 Sep, 2021 1 commit
- update v2021 · 34baa20d
  Carine Rey authored Sep 14, 2021
  
  34baa20d
07 Sep, 2021 3 commits
- start update for 2021 · a37de087
  Carine Rey authored Sep 07, 2021
```
- upgrade R  (4.1.1)
- add macs2
```
  a37de087
- change docker image host · 2cf1f4d9
  Carine Rey authored Sep 07, 2021
  
  2cf1f4d9
- Update Dockerfile · f6436200
  Carine Rey authored Sep 07, 2021
  
  f6436200
22 Oct, 2020 1 commit
- add a command line for a local test · c93d7257
  Carine Rey authored Oct 22, 2020
  
  c93d7257
21 Oct, 2020 1 commit
- add a script to build and push the docker image · 02538dc0
  Carine Rey authored Oct 21, 2020
  
  02538dc0
16 Oct, 2020 1 commit
- Dockerfile updated TP 2020 · 8d73e246
  Corentin Dechaud authored Oct 16, 2020
  
  8d73e246
14 Oct, 2020 5 commits
- Add general parameters description (thank Christophe) · 3ad20d35
  Carine Rey authored Oct 14, 2020
  
  3ad20d35
- rename · e4046905
  Carine Rey authored Oct 14, 2020
  
  e4046905
- add README.md · f2d2cc34
  Carine Rey authored Oct 14, 2020
  
  f2d2cc34
- gitlab CI config (thank Christophe) · 185b220e
  Carine Rey authored Oct 14, 2020
  
  185b220e
- Deployment based on Rstudio-IFB app (thank Christophe) · f52df75c
  Carine Rey authored Oct 14, 2020
  
  f52df75c
12 Oct, 2020 1 commit
- Update deploy.sh · c1c26db7
  Carine Rey authored Oct 12, 2020
  
  c1c26db7
06 Oct, 2020 3 commits
- initial deploy/install scripts · 726e1649
  Carine Rey authored Oct 06, 2020
  
  726e1649
- Add paths file 2019 · 235e1286
  Carine Rey authored Oct 06, 2020
  
  235e1286
- Add Dockerfile 2019 · fbac1645
  Carine Rey authored Oct 06, 2020
  
  fbac1645