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Unverified Commit 5760392e authored by Laurent Modolo's avatar Laurent Modolo
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FastQC: nf update psmn config

parent eb58b93f
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...@@ -11,13 +11,12 @@ profiles { ...@@ -11,13 +11,12 @@ profiles {
psmn { psmn {
process{ process{
withname: fastqc_fastq { withname: fastqc_fastq {
beforeScript = "module purge; module load FastQC/0.11.5" beforeScript = "source /usr/share/lmod/lmod/init/bash; module use ~/privatemodules"
module = "FastQC/0.11.5"
executor = "sge" executor = "sge"
cpus = 1 cpus = 1
memory = "5GB" memory = "20GB"
time = "6h" time = "12h"
queueSize = 1000
pollInterval = '60sec'
queue = 'monointeldeb128' queue = 'monointeldeb128'
} }
} }
......
...@@ -11,13 +11,12 @@ profiles { ...@@ -11,13 +11,12 @@ profiles {
psmn { psmn {
process{ process{
withname: fastqc_fastq { withname: fastqc_fastq {
beforeScript = "module purge; module load FastQC/0.11.5" beforeScript = "source /usr/share/lmod/lmod/init/bash; module use ~/privatemodules"
module = "FastQC/0.11.5"
executor = "sge" executor = "sge"
cpus = 1 cpus = 1
memory = "5GB" memory = "20GB"
time = "6h" time = "12h"
queueSize = 1000
pollInterval = '60sec'
queue = 'monointeldeb128' queue = 'monointeldeb128'
} }
} }
......
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