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Verified Commit 0304aca0 authored by Laurent Modolo's avatar Laurent Modolo
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kallisto: test of in2p3 config file

parent 5f6b5a6a
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......@@ -33,6 +33,18 @@ profiles {
}
}
}
ccin2p3 {
process{
withName: index_fasta {
beforeScript = "PATH=/sps/lbmc/common/nextflow/src/singularity_modules/kallisto/0.44.0/:$PATH"
executor = "sge"
clusterOptions = "-P P_lbmc -l os=cl7 -l sps=1 -r n -S '/usr/local/bin/bash -l'"
cpus = 4
memory = "8GB"
time = "24h"
queue = 'mc_huge'
penv = 'multicores 4'
}
}
}
}
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