CHANGELOG.md

Changelog

All notable changes to this project will be documented in this file.

The format is based on Keep a Changelog, and this project adheres to Semantic Versioning.

[0.2.6] - 2018-08-23

Added

• Added src/training_dataset.nf to build a small training dataset from NGS data

Changed

• the structure of src/nf_modules: the tests folder was removed

[0.2.5] - 2018-08-22

Added

• This fine changelog

Changed

• the structure of src/nf_modules: the tests folder was removed

[0.2.4] - 2018-08-02

Changed

• add paired_id variable in the output of every single-end data processes to match the paired output

[0.2.3] - 2018-07-25

Added

• List of tools available as nextflow, docker or sge module to the README.md

[0.2.2] - 2018-07-23

Added

• SRA module from cigogne/nextflow-master 52b510e4

[0.2.1] - 2018-07-23

Added

• List of tools available as nextflow, docker or sge module

[0.2.0] - 2018-06-18

Added

• doc/TP_computational_biologists.md
• Kallisto/0.44.0

Changed

• add paired_id variable in the output of every paired data processes
• BEDtools: fixes for fasta handling
• UrQt: fix git version in Docker

[0.1.2] - 2018-06-18

Added

• doc/tp_experimental_biologist.md and Makefile to build the pdf
• tests files for BEDtools

Changed

• Kallisto: various fixes
• UrQt: improve output and various fixes

Removed

• src/nf_test.config modules have their own .config

[0.1.2] - 2018-06-18

Added

• doc/tp_experimental_biologist.md and Makefile to build the pdf
• tests files for BEDtools

Changed

• Kallisto: various fixes
• UrQt: improve output and various fixes

Removed

• src/nf_test.config modules have their own .config

[0.1.0] - 2018-05-06

This is the first working version of the repository as a nextflow module repository