TP_experimental_biologists.md

TP for experimental biologists

The Goal of this practical is to learn how to build your own pipeline with nextflow and using the tools already wrapped in Docker and SGE.

Initialize your own project

You are going to build a pipeline for you or your team. So the first step is to create your own project.

Instead of reinventing the weel, you can use the pipelines/nextflow as a template. To easily do so, go to the pipelines/nextflow repository and click on the fork button.

In git, the action of forking means that you are going to make your own private copy of a repository.