Commits · 5991008ec4cf22f7e40c16866b77c3e2a4ade3e0 · nfontrod / nextflow · GitLab

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Mar 01, 2019
- BEDtools: add singularity files · 5991008e
  Laurent Modolo authored 6 years ago
  
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  5991008e
- UrQt: add singularity tests · 9fb75825
  Laurent Modolo authored 6 years ago
  
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  9fb75825
- UrQt: switch cpus config from .nf to .config · c8902c46
  Laurent Modolo authored 6 years ago
  
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  c8902c46
- UrQt: add singularity config and test · 2901dd9f
  Laurent Modolo authored 6 years ago
  
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  2901dd9f
- UrQt: add singularity files · b51f888d
  Laurent Modolo authored 6 years ago
  
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  b51f888d
- add bin folder to the project · 73c00f12
  Laurent Modolo authored 6 years ago
  
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  73c00f12
Feb 20, 2019
- cudatapt: add cutadapt v1.15 for docker and nf · 93f2be99
  Laurent Modolo authored 6 years ago
  
  93f2be99
Feb 15, 2019
- Merge branch 'master' of gitlab_lbmc:pipelines/nextflow · 110a92e1
  Laurent Modolo authored 6 years ago
  
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  110a92e1
- TP_experimental_biologists.md : fix for PSMN computers · d854d051
  Laurent Modolo authored 6 years ago
  
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  d854d051
- Merge branch 'master' of gitlab_lbmc:pipelines/nextflow · ea8eaa49
  Laurent Modolo authored 6 years ago
  
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  ea8eaa49
- TP_experimental_biologists.md: add fix for docker · 3a337a8f
  Laurent Modolo authored 6 years ago
  
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  3a337a8f
- UrQt: Dockerfile add version · 7d4588a7
  Laurent Modolo authored 6 years ago
  
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  7d4588a7
Feb 10, 2019
- MultiQC: fix Dockerfile for debian · 8bc50851
  Laurent Modolo authored 6 years ago
  
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  8bc50851
Feb 07, 2019
- MultiQC: add ps tools to Dockerfile · d651e144
  Laurent Modolo authored 6 years ago
  
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  d651e144
- MultiQC: switch Dockerfile from ubuntu to debian · c70c6503
  Laurent Modolo authored 6 years ago
  
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  c70c6503
Feb 05, 2019
- deepTools: add ps to Dockerfile · 1d82bf7c
  Laurent Modolo authored 6 years ago
  
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  1d82bf7c
- deepTools: Dockerfile add v3.1.1 · 6feaf7ac
  Laurent Modolo authored 6 years ago
  
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  6feaf7ac
- ucsc: install app in docker ... · 8e0939bc
  Laurent Modolo authored 6 years ago
  
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  8e0939bc
- ucsc: fix Dockerfile · af991e09
  Laurent Modolo authored 6 years ago
  
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  af991e09
- deepTools: Dockerfile fix deepTools (ubuntu -> debian) · 5ad5735c
  Laurent Modolo authored 6 years ago
  
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  5ad5735c
- UCSC: add Dockerfile · 6fb743f5
  Laurent Modolo authored 6 years ago
  
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  6fb743f5
Dec 21, 2018
- ucsc: add docker · 504d7682
  Laurent Modolo authored 6 years ago
  
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- switch SAMtools to alpine · 2bb534c5
  Laurent Modolo authored 6 years ago
  
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  2bb534c5
Dec 20, 2018
- SAMtools: Dockerfile ubuntu -> alpine · 86ff02d6
  Laurent Modolo authored 6 years ago
  
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  86ff02d6
- deepTools: fix typo in bam_to_bigwig.nf · 7f9cd94b
  Laurent Modolo authored 6 years ago
  
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  7f9cd94b
- deepTools: add test for 2 bam files · d14e7205
  Laurent Modolo authored 6 years ago
  
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  d14e7205
Dec 19, 2018
- README.md: add deepTools · 0c40a0da
  Laurent Modolo authored 6 years ago
  
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  0c40a0da
- deepTools: add plot_profile module · 3fede7c6
  Laurent Modolo authored 6 years ago
  
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- deepTools: add compute_matrix module · b25a6418
  Laurent Modolo authored 6 years ago
  
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- deepTools: tests.sh for compute_matrix · 0a98c166
  Laurent Modolo authored 6 years ago
  
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  0a98c166
- deepTools: bam_to_bigwig working · a095fa9d
  Laurent Modolo authored 6 years ago
  
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  a095fa9d
- deepTools: add config file for bam_to_bigwig · 543e35a0
  Laurent Modolo authored 6 years ago
  
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  543e35a0
- nf_modules: fix withname -> withName in config files · 85a68216
  Laurent Modolo authored 6 years ago
  
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  85a68216
Dec 14, 2018
- cutadapt: dockerfile add bash... · 03bee3cf
  Laurent Modolo authored 6 years ago
  
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  03bee3cf
- Merge branch 'master' of gitlab_lbmc:pipelines/nextflow · 60833afb
  Laurent Modolo authored 6 years ago
  
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  60833afb
- cutadapt:1.14: Dockerfile ubuntu -> alpine · 76ee441f
  Laurent Modolo authored 6 years ago
  
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  76ee441f
Dec 13, 2018
- cutadapt: update docker file · 50f9fbf7
  Laurent Modolo authored 6 years ago
  
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  50f9fbf7
- TP_experimental_biologists.md: fix typo · 2cc172d5
  Laurent Modolo authored 6 years ago
  
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  2cc172d5
- TP_computational_biologists.md: update path to match new tree structure · 5530aa5e
  Laurent Modolo authored 6 years ago
  
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  5530aa5e
Oct 26, 2018
- nf modules config: remove cpus info · 03f44eef
  Laurent Modolo authored 6 years ago
  
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  03f44eef