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Verified Commit 5b1011f6 authored by Laurent Modolo's avatar Laurent Modolo
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add publishDir

parent 786e69de
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......@@ -21,6 +21,7 @@ Channel
process trimming {
tag "$pair_id"
cpus 4
publishDir "results/fastq/trimming/", mode: 'copy'
input:
set pair_id, file(reads) from fastq_files
......@@ -53,6 +54,7 @@ Channel
process trimming {
tag "$reads.baseName"
cpus 4
publishDir "results/fastq/trimming/", mode: 'copy'
input:
file reads from fastq_files
......
......@@ -21,6 +21,7 @@ Channel
process adaptor_removal {
tag "$pair_id"
publishDir "results/fastq/adaptor_removal/", mode: 'copy'
input:
set pair_id, file(reads) from fastq_files
......@@ -51,6 +52,7 @@ Channel
process adaptor_removal {
tag "$reads.baseName"
publishDir "results/fastq/adaptor_removal/", mode: 'copy'
input:
file reads from fastq_files
......@@ -83,6 +85,7 @@ Channel
process trimming {
tag "$pair_id"
publishDir "results/fastq/trimming/", mode: 'copy'
input:
set pair_id, file(reads) from fastq_files
......@@ -113,6 +116,7 @@ Channel
process trimming {
tag "$reads.baseName"
publishDir "results/fastq/trimming/", mode: 'copy'
input:
file reads from fastq_files
......
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