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mherbett
nextflow
Commits
52d58451
Verified
Commit
52d58451
authored
6 years ago
by
Laurent Modolo
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trimming: make output channel more clear
parent
462e3dd0
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src/nf_modules/UrQt/urqt.nf
+1
-1
1 addition, 1 deletion
src/nf_modules/UrQt/urqt.nf
src/nf_modules/cutadapt/cutadapt.nf
+2
-2
2 additions, 2 deletions
src/nf_modules/cutadapt/cutadapt.nf
with
3 additions
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3 deletions
src/nf_modules/UrQt/urqt.nf
+
1
−
1
View file @
52d58451
...
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@@ -27,7 +27,7 @@ process trimming {
set pair_id, file(reads) from fastq_files
output:
file "*_trim_R{1,2}.fastq.gz" into fastq_files_
cut
file "*_trim_R{1,2}.fastq.gz" into fastq_files_
trim
script:
"""
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src/nf_modules/cutadapt/cutadapt.nf
+
2
−
2
View file @
52d58451
...
...
@@ -91,7 +91,7 @@ process trimming {
set pair_id, file(reads) from fastq_files
output:
file "*_trim_R{1,2}.fastq.gz" into fastq_files_
cut
file "*_trim_R{1,2}.fastq.gz" into fastq_files_
trim
script:
"""
...
...
@@ -122,7 +122,7 @@ process trimming {
file reads from fastq_files
output:
file "*_trim.fastq.gz" into fastq_files_
cut
file "*_trim.fastq.gz" into fastq_files_
trim
script:
"""
...
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