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lgely
nextflow
Commits
9800c42f
Commit
9800c42f
authored
Sep 23, 2021
by
lgely
Browse files
RNAseq.nf changed Kallisto "include" line to return results
parent
b9c47ee7
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src/RNAseq_tp.nf
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9800c42f
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@@ -6,7 +6,7 @@ log.info "bed file : ${params.bed}"
include { fastp } from "./nf_modules/fastp/main.nf"
include { fasta_from_bed } from "./nf_modules/bedtools/main.nf"
include { index_fasta; mapping_fastq } from './nf_modules/kallisto/main.nf'
include { index_fasta; mapping_fastq } from './nf_modules/kallisto/main.nf'
addParams(mapping_fastq_out: "quantification/")
params.fastq = "data/fastq/*_{1,2}.fastq"
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