Skip to content
GitLab
Explore
Sign in
Primary navigation
Search or go to…
Project
C
CIRI2021 - Population genetics
Manage
Activity
Members
Labels
Plan
Issues
Issue boards
Milestones
Wiki
Code
Merge requests
Repository
Branches
Commits
Tags
Repository graph
Compare revisions
Snippets
Build
Pipelines
Jobs
Pipeline schedules
Artifacts
Deploy
Releases
Package Registry
Model registry
Operate
Environments
Terraform modules
Monitor
Incidents
Analyze
Value stream analytics
Contributor analytics
CI/CD analytics
Repository analytics
Model experiments
Help
Help
Support
GitLab documentation
Compare GitLab plans
Community forum
Contribute to GitLab
Provide feedback
Keyboard shortcuts
?
Snippets
Groups
Projects
Show more breadcrumbs
jplantad
CIRI2021 - Population genetics
Commits
2efd2aff
Commit
2efd2aff
authored
3 years ago
by
jplantad
Browse files
Options
Downloads
Patches
Plain Diff
Update README.md
parent
d0b1248c
No related branches found
Branches containing commit
No related tags found
No related merge requests found
Changes
1
Hide whitespace changes
Inline
Side-by-side
Showing
1 changed file
README.md
+2
-6
2 additions, 6 deletions
README.md
with
2 additions
and
6 deletions
README.md
+
2
−
6
View file @
2efd2aff
...
...
@@ -2,10 +2,6 @@ CIRI 2021 - Population genetics
This project contains all the scripts for performing population genetics analyses on multiple VCF files.
report_pan.Rmd
report_gor.Rmd
report_pon.Rmd
-> calculate observed and expected heterozygosity, Levene Test, and Tajima's D
1) popg_loop.R > load data and run the report scripts for each genetics
popg_loop.R
-> imports the data and iterates the report.Rmd script on each gene for each genus
\ No newline at end of file
2) report_
*
.Rmd > compute population genomics analyses and create a pdf report for each gene using LaTeX
This diff is collapsed.
Click to expand it.
Preview
0%
Loading
Try again
or
attach a new file
.
Cancel
You are about to add
0
people
to the discussion. Proceed with caution.
Finish editing this message first!
Save comment
Cancel
Please
register
or
sign in
to comment