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Created with Raphaël 2.2.015May1410973217Apr1612929Mar28272625222120137654120Feb15107521Dec2019141326Oct242316121110986543226Sep2524201817141331Aug292724232221231Jul3027262524231312327Jun2019187654131May3025improve comment of nextflow.pbsupdate condata package listfix ccin2p3 profile for loading miniconda3conda_packages.sh: add r3.5.1update sambamba to 0.6.9src/conda_packages.sh: add python3.7conda_packages.sh: fix conda install cmdconda_packages.sh: fix install_env functionconda_packages.sh: add R and python envMerge branch 'rseraphi/nextflow-master'docker r et pythonconda_packages.sh: add script to install conda packages for nfnf_modules: update ccin2p3 confignextflow.pbs: working qsub for ccin2p3kallisto: indexing config sh conda env instead of sourcekallisto: indexing config add error log for in2p3nextflow.pbs: add correct fasta pathnextflow.pbs: change NF parameters ordernextflow: update in2p3 test for demon queuenextflow.pbs: fix logs pathnextflow.pbs: add context demonadd pbs script for in2p3kallisto: try to remove option for in2p3 qsubkallisto: index.config test mc_huge for indexingkallisto: indexing.config add queue for in2p3kallisto: add ccin2p3_conda profile for indexingurqt: add in2p3 configsratoolkit: add in2p3 configsamtools: add in2p3 configsamblaster: add in2p3 configsambamba: add in2p3 configrsem: add in2p3 configmusic: add in2p3 configmultiqc: add in2p3 configmacs2: add in2p3 config # Please enter the commit message for your changes. Lines startinghtseq: add in2p3 confighisat2: add in2p3 configfastqc: add in2p3 configfastp: add in2p3 configdeeptools: add in2p3 config