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This repository is a template containing scripts to help you build your own nextflow pipeline.

Genotypy is a tool to detect genomic barcodes inserted into specific loci from any kind of sequencing data

Functional analysis of RNAseq differential expression analysis, on competence mutants. Use of COG annotation for enrichment analysis in Legionella pneumophila.

Scripts for paper Evaluation of genome and base editing tools in maize protoplasts (Fierlej et al, Front. Plant Sci. 2022)

script allowing the visualization of the coverage in bigwig files

This repository is a template containing scripts to help you build your own nextflow pipeline.

Analysis of the composition biais within the exons

This repository is a template containing scripts to help you build your own nextflow pipeline.

Program analyzing QY2H data (.fcs files) and generating affinity ladder. A GUI has been developed for later release in the context of the publication to come.

François Gindraud, a postdoc in the SBDM Team, who has a loot of experience in software development, will be with us for a few months. François, will be able to give a series of small tutorials session on how to write better code.