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Commit c8ebef35 authored by mcariou's avatar mcariou
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tableau pancorona

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......@@ -170,7 +170,9 @@ Interactions between our genes under positive selection and the 4 coronaviruses
I extracted the interaction list from cytoscape.
\textbf{Interaction list extraction and correspondance between uniprot ID and gene names}
~
Interaction list extraction and correspondance between uniprot ID and gene names.
<<virhostnet>>=
cyto<-read.csv(paste0(workdir, "data/corona_noSars-CoV-2_edges.csv"))
......@@ -199,6 +201,7 @@ Number of interacting coronavirus per gene:
pancorona
@
\subsection{Write pancorona table}
<<>>=
head(pandginnall)
......
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......@@ -400,7 +400,9 @@ Interactions between our genes under positive selection and the 4 coronaviruses
I extracted the interaction list from cytoscape.
\textbf{Interaction list extraction and correspondance between uniprot ID and gene names}
~
Interaction list extraction and correspondance between uniprot ID and gene names.
\begin{knitrout}
\definecolor{shadecolor}{rgb}{0.969, 0.969, 0.969}\color{fgcolor}\begin{kframe}
......@@ -450,6 +452,7 @@ Number of interacting coronavirus per gene:
\end{kframe}
\end{knitrout}
\subsection{Write pancorona table}
\begin{knitrout}
\definecolor{shadecolor}{rgb}{0.969, 0.969, 0.969}\color{fgcolor}\begin{kframe}
......
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