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"merge.Gene"	"PreyGene"	"PreyGene_JYname"	"BaitShort"	"Gene.name.x"	"list"	"description"	"other.names"	"top40_posSeln"	"Num.primate.seqs"	"Alignment.length..nucleotides."	"Alignment.length..codons."	"whole.gene.dN.dS.model.0"	"total.tree.length"	"total.dN.tree.length"	"total.dS.tree.length"	"p.value.M8vsM8a..raw."	"p.value.M8vsM8a..BH.corrected."	"pVal.M8vsM7"	"pVal.M8vsM7.adj"	"pVal.M2vsM1"	"pVal.M2vsM1.adj"	"X..codons.under.positive.selection"	"dN.dS.of.positively.selected.codons"	"Number.of.codons.with.BEB....0.9"	"Codons.under.positive.selection..BEB..0.9...alignment.position."	"cooper.batsGene"	"cooper.batsGene_Ensembl_ID"	"cooper.batsIsoform_Ensembl_ID"	"cooper.batsSpecies"	"cooper.batsReference_length.aa."	"cooper.batsPercent_analyzed"	"cooper.batsAverage_dNdS"	"cooper.batsMaximum_dS"	"cooper.batsAverage_M7_tree"	"cooper.batsAverage_M8_tree"	"cooper.batsM7_log_likelihood"	"cooper.batsM8_log_likelihood"	"cooper.batsM7.M8_p_value"	"cooper.batsM8a_log_likelihood"	"cooper.batsM8.M8a_pvalue"	"cooper.batsBEB_hits.pp.0.95."	"cooper.batsBEB_sites"	"cooper.primates.Gene"	"cooper.primates.Gene_Ensembl_ID"	"cooper.primates.Isoform_Ensembl_ID"	"cooper.primates.Species"	"cooper.primates.Reference_length.aa."	"cooper.primates.Percent_analyzed"	"cooper.primates.Average_dNdS"	"cooper.primates.Maximum_dS"	"cooper.primates.Average_M7_tree"	"cooper.primates.Average_M8_tree"	"cooper.primates.M7_log_likelihood"	"cooper.primates.M8_log_likelihood"	"cooper.primates.M7.M8_p_value"	"cooper.primates.M8a_log_likelihood"	"cooper.primates.M8.M8a_pvalue"	"cooper.primates.BEB_hits.pp.0.95."	"cooper.primates.BEB_sites"	"hawkins_Gene"	"hawkins_Positive.Selection..M8vM8a.p.value"	"hawkins_Positive.Selection..M8vM8a.FDR.corrected.p.value"	"hawkins_Gene.Name.Alias"	"hawkins_Connection.to.immunity.or.pathogens"	"hawkins_Connection.to.reproduction"	"hawkins_Connection.to.collagen"	"hawkins_Connection.to.peroxisome"	"hawkins_Gene.Description.for.Human.Ortholog..from.Genbank.GENE.database."	"CpGmask.numNT"	"CpGmask.numAA"	"CpGmask.overall.dN.dS"	"CpGmask.total.tree.length"	"CpGmask.total.dN.tree.length"	"CpGmask.total.dS.tree.length"	"CpGmask.pVal.M8vsM8a"	"CpGmask.pVal.M8vsM8a.adj"	"CpGmask.pVal.M8vsM7"	"CpGmask.pVal.M8vsM7.adj"	"CpGmask.pVal.M2vsM1"	"CpGmask.pVal.M2vsM1.adj"	"CpGmask.percent.sites.under.positive.selection"	"CpGmask.dN.dS.of.selected.sites"	"CpGmask.num.sites.with.BEB...0.9"	"CpGmask.which.sites.have.BEB...0.9"	"Gene.name.y"	"File"	"Name"	"GeneSize"	"dginn-primate_NbSpecies"	"dginn-primate_omegaM0Bpp"	"dginn-primate_omegaM0codeml"	"dginn-primate_BUSTED"	"dginn-primate_BUSTED.p.value"	"dginn-primate_MEME.NbSites"	"dginn-primate_MEME.PSS"	"dginn-primate_BppM1M2"	"dginn-primate_BppM1M2.p.value"	"dginn-primate_BppM1M2.NbSites"	"dginn-primate_BppM1M2.PSS"	"dginn-primate_BppM7M8"	"dginn-primate_BppM7M8.p.value"	"dginn-primate_BppM7M8.NbSites"	"dginn-primate_BppM7M8.PSS"	"dginn-primate_codemlM1M2"	"dginn-primate_codemlM1M2.p.value"	"dginn-primate_codemlM1M2.NbSites"	"dginn-primate_codemlM1M2.PSS"	"dginn-primate_codemlM7M8"	"dginn-primate_codemlM7M8.p.value"	"dginn-primate_codemlM7M8.NbSites"	"dginn-primate_codemlM7M8.PSS"	"bats_File"	"bats_Name"	"bats_GeneSize"	"bats_NbSpecies"	"bats_omegaM0Bpp"	"bats_omegaM0codeml"	"bats_BUSTED"	"bats_BUSTED_p.value"	"bats_MEME_NbSites"	"bats_MEME_PSS"	"bats_BppM1M2"	"bats_BppM1M2_p.value"	"bats_BppM1M2_NbSites"	"bats_BppM1M2_PSS"	"bats_BppM7M8"	"bats_BppM7M8_p.value"	"bats_BppM7M8_NbSites"	"bats_BppM7M8_PSS"	"bats_codemlM1M2"	"bats_codemlM1M2_p.value"	"bats_codemlM1M2_NbSites"	"bats_codemlM1M2_PSS"	"bats_codemlM7M8"	"bats_codemlM7M8_p.value"	"bats_codemlM7M8_NbSites"	"bats_codemlM7M8_PSS"	"bats_Lucie.s.comments"	"bats_Action.taken"	"status"
"AAR2"	"AAR2"	"AAR2"	"M"	"AAR2"	"list26_COV_list4dataset2nonOrf"	"AAR2 splicing factor homolog"	"C20orf4|CGI-23"	"no"	24	1155	385	0.10697	0.43296	0.0468	0.4372	0.90865	1	0.993	1	1	1	NA	NA	NA	""	"AAR2"	"ENSMLUG00000011977.1"	"ENSMLUT00000011973.1"	14	385	98.44155844	0.121314111	0.2847	1.07113	1.07113	-3321.28142	-3321.28143	0.99999	NA	NA	NA	""	"AAR2"	"ENSG00000131043.11"	"ENST00000373932.3"	17	385	99.22077922	0.098793106	0.1997	0.37743	0.37786	-2314.613474	-2314.58797	0.97481848	NA	NA	NA	""	"AAR2"	0.29088992	1	""	NA	NA	NA	""	""	957	319	0.13822	0.2348	0.031	0.2242	1	1	1	1	1	1	NA	NA	NA	""	"AAR2"	"AAR2_sequences_filtered_longestORFs_mafft_mincov_prank"	"AAR2_all"	601	24	"0.138510454262"	"0.105"	"N"	"0.9333"	1	"264"	"N"	"0.9999992818091265"	0	"na"	"N"	"0.9999999748811209"	0	"na"	"N"	"1.0"	0	"na"	"N"	"1.0"	0	"na"	"AAR2_sequences_filtered_longestORFs_mafft_prank"	"AAR2"	543	12	"0.111382448975"	"0.103"	"N"	1	0	"na"	"N"	"0.9999998011153564"	0	"na"	"N"	"0.0883931847285696"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.2574319154136435"	0	"na"	""	""	"shared"
"AASS"	"AASS"	"AASS"	"M"	"AASS"	"list26_COV_list4dataset2nonOrf"	"aminoadipate-semialdehyde synthase"	"LKR/SDH|LKRSDH|LORSDH"	"no"	23	2781	927	0.15824	0.42179	0.0559	0.3531	0.097344	0.367425882352941	0.0774	0.305647222222222	0.26252	1	2.274	2.39714	2	"5_R_0.927,777_D_0.910"	"AASS"	"ENSMLUG00000015957.2"	"ENSMLUT00000015979.2"	9	819	100	0.141477444	0.3292	0.90534	0.91599	-6669.360229	-6664.828436	0.010761364	-6667.008435	0.036792348	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"AASS"	0.075255753	0.819592694	""	NA	NA	NA	""	""	2364	788	0.18941	0.27822	0.0426	0.2248	1	1	1	1	0.33201	1	NA	NA	NA	""	"AASS"	"AASS_sequences_filtered_longestORFs_mafft_mincov_prank"	"AASS_all"	1460	24	"0.146308728224"	"0.136"	"N"	"0.4684"	8	"345, 464, 840, 841, 1194, 1235, 1238, 1375"	"N"	"0.9999992149344861"	0	"na"	"N"	"0.9999999473147924"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.8344353586953767"	0	"na"	"AASS_sequences_filtered_longestORFs_mafft_prank"	"AASS"	1418	12	"0.168200575660"	"0.165"	"N"	0.0514	8	"44, 54, 65, 336, 360, 382, 384, 729"	"N"	"0.7898559819260855"	0	"na"	"Y"	"3.993698374833498e-08"	13	"41, 42, 54, 65, 165, 382, 545, 577, 642, 845, 906, 914, 921"	"N"	"0.3072787386016008"	0	"na"	"Y"	"0.00623236128209284"	0	""	""	""	"shared"
"AATF"	"AATF"	"AATF"	"nsp8"	"AATF"	"list24_COV_list2nonOrf"	"apoptosis antagonizing transcription factor"	"BFR2|CHE-1|CHE1|DED"	"no"	24	1707	569	0.32081	0.5717	0.1173	0.3657	0.34348	0.796625301204819	0.41047	0.908223850574713	0.70523	1	NA	NA	NA	""	"AATF"	"ENSMLUG00000014754.2"	"ENSMLUT00000023634.1"	11	509	88.60510806	0.127438902	0.3589	0.88821	0.89052	-3789.10586	-3788.867496	0.787915838	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"AATF"	0.111335036	1	""	NA	NA	NA	""	""	1350	450	0.32933	0.3587	0.0753	0.2285	1	1	1	1	1	1	NA	NA	NA	""	"AATF"	"AATF_sequences_filtered_longestORFs_mafft_mincov_prank"	"AATF_all"	814	24	"0.272118991707"	"0.273"	"Y"	"0.0000"	10	"7, 133, 236, 291, 307, 426, 548, 549, 602, 720"	"N"	"0.9999990153742446"	0	"na"	"N"	"0.999382674275042"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.2615839537910964"	0	"na"	"AATF_sequences_filtered_longestORFs_mafft_prank"	"AATF"	795	11	"0.212648396462"	"0.208"	"N"	0.9809	6	"136, 140, 162, 182, 449, 669"	"N"	"0.999998128316225"	0	"na"	"N"	"0.37817758541461555"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.8869204367172543"	0	"na"	""	""	"shared"
"ABCC1"	"ABCC1"	"ABCC1"	"orf9c"	"ABCC1"	"list24_COV_list2nonOrf"	"ATP binding cassette subfamily C member 1"	"ABC29|ABCC|GS-X|MRP|MRP1"	"yes"	23	4596	1532	0.09711	0.7375	0.0836	0.8607	0.00015576	0.0028556	0.00017542	0.003376835	0.0018236	0.02808344	0.069	14.34062	2	"927_H_0.937,1047_C_0.996"	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"ABCC1"	0.989782371	1	""	NA	NA	NA	""	""	3117	1039	0.11016	0.38354	0.049	0.445	1	1	1	1	1	1	NA	NA	NA	""	"ABCC1"	"ABCC1_sequences_filtered_longestORFs_mafft_mincov_prank"	"ABCC1_all"	2124	19	"0.117080897867"	"0.075"	"Y"	"0.0000"	16	"272, 293, 307, 437, 599, 606, 685, 779, 784, 863, 1175, 1257, 1272, 1291, 1394, 1888"	"N"	"0.9999991891657932"	0	"na"	"Y"	"0.0021604753086363598"	2	"1115, 1257"	"N"	"0.9841273200556575"	0	"na"	"N"	"0.1394568562148886"	0	"na"	"ABCC1_sequences_filtered_longestORFs_mafft_prank"	"ABCC1"	1909	11	"0.114988754568"	"0.104"	"N"	1	16	"276, 297, 302, 461, 467, 545, 627, 689, 856, 958, 1288, 1319, 1417, 1568, 1667, 1901"	"N"	"0.9999988430397351"	0	"na"	"Y"	"0.00010463851231527765"	2	"581, 914"	"N"	"1.0"	0	"na"	"N"	"0.14427991674283228"	0	"na"	""	""	"shared"
"ACAD9"	"ACAD9"	"ACAD9"	"orf9c"	"ACAD9"	"list24_COV_list2nonOrf"	"acyl-CoA dehydrogenase family member 9"	"NPD002"	"no"	24	1875	625	0.27034	0.70758	0.1376	0.509	1	1	1	1	1	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"ACAD9"	"ENSG00000177646.18"	"ENST00000505192.5"	18	70	95.71428571	0.788848042	0.1923	0.87275	0.87275	-600.730687	-600.730723	0.999964001	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	1362	454	0.45958	0.45559	0.1151	0.2505	0.32167	1	0.52503	1	0.61198	1	NA	NA	NA	""	"ACAD9"	"ACAD9_sequences_filtered_longestORFs_mafft_mincov_prank"	"ACAD9_all"	922	23	"0.246774938393"	"0.207"	"Y"	"0.0000"	15	"4, 22, 45, 190, 305, 413, 660, 716, 724, 738, 773, 854, 857, 871, 878"	"N"	"0.9999987144691737"	0	"na"	"N"	"0.3262991387891095"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.09053669869792183"	0	"na"	"ACAD9_sequences_filtered_longestORFs_mafft_prank"	"ACAD9"	892	11	"0.181748589596"	"0.186"	"Y"	0.0074	7	"7, 8, 22, 137, 513, 609, 778"	"N"	"0.9739193853272009"	0	"na"	"Y"	"0.006776994523459932"	1	"2"	"N"	"0.5504605431263127"	0	"na"	"Y"	"0.02413722558780989"	0	""	""	""	"shared"
"ACADM"	"ACADM"	"ACADM"	"M"	"ACADM"	"list26_COV_list4dataset2nonOrf"	"acyl-CoA dehydrogenase medium chain"	"ACAD1|MCAD|MCADH"	"yes"	24	1365	455	0.24077	0.47772	0.0949	0.3941	0.00028162	0.004336948	0.0012159	0.0161421206896552	0.0016625	0.0266692708333333	1.072	7.58852	4	"6_G_0.924,89_T_0.994,264_I_0.907,316_V_0.995"	"ACADM"	"ENSMLUG00000003015.2"	"ENSMLUT00000003015.2"	4	447	99.32885906	0.179970289	0.1138	0.18347	0.232	-2134.919661	-2125.428875	7.55e-05	-2134.103026	3.11e-05	7	"C97, T98, Q99, H100, R22, K88, E92"	"ACADM"	"ENSG00000117054.13"	"ENST00000541113.5"	17	386	88.86010363	0.440133164	0.1529	0.40184	0.43711	-2135.141647	-2128.596922	0.001437679	-2135.139747	0.000297567	2	"T53, V247"	"ACADM"	0.001706146	0.082051205	""	NA	NA	NA	""	""	1200	400	0.29779	0.35519	0.0796	0.2672	0.39386	1	0.67628	1	0.69525	1	NA	NA	NA	""	"ACADM"	"ACADM_sequences_filtered_longestORFs_mafft_mincov_prank"	"ACADM_all"	924	25	"0.199060639609"	"0.153"	"Y"	"0.0000"	12	"375, 465, 479, 485, 552, 561, 605, 623, 687, 739, 839, 853"	"Y"	"0.037704182279039634"	0	""	"Y"	"0.00023100528073301762"	3	"479, 687, 739"	"Y"	"0.033273300180114804"	0	""	"Y"	"0.000697505610900003"	2	"479, 739"	"ACADM_sequences_filtered_longestORFs_mafft_prank"	"ACADM"	528	12	"0.488231418936"	"0.377"	"N"	0.0735	10	"58, 60, 192, 247, 290, 320, 338, 374, 436, 440"	"Y"	"0.010015777770694078"	1	"192"	"Y"	"7.993052097396971e-05"	2	"85, 192"	"Y"	"0.002283604872919489"	1	"192"	"Y"	"0.0007848640813105038"	2	"85, 192"	""	""	"shared"
"ACSL3"	"ACSL3"	"ACSL3"	"nsp7"	"ACSL3"	"list24_COV_list2nonOrf"	"acyl-CoA synthetase long chain family member 3"	"ACS3|FACL3|LACS 3|LACS3|PRO2194"	"no"	22	2163	721	0.0929	0.3698	0.0344	0.3705	1	1	1	1	1	1	NA	NA	NA	""	"ACSL3"	"ENSMLUG00000010952.2"	"ENSMLUT00000010950.2"	6	721	99.58391123	0.076280564	0.4619	0.68965	0.68965	-4861.986231	-4861.986282	0.999949001	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"ACSL3"	0.885467572	1	""	NA	NA	NA	""	""	1806	602	0.12383	0.25536	0.0304	0.2453	0.33716	1	0.51788	1	0.63134	1	NA	NA	NA	""	"ACSL3"	"ACSL3_sequences_filtered_longestORFs_mafft_mincov_prank"	"ACSL3_all"	850	24	"0.086446706405"	"0.079"	"Y"	"0.0011"	5	"302, 326, 333, 444, 600"	"N"	"0.9999996550341761"	0	"na"	"N"	"0.8741931893713637"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.33823985668758066"	0	"na"	"ACSL3_sequences_filtered_longestORFs_mafft_prank_part1_prank"	"ACSL3_part1"	837	11	"0.075877266256"	"0.069"	"N"	0.547	2	"8, 435"	"N"	"0.9999995138724715"	0	"na"	"N"	"0.10145409742661003"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.9990004998331715"	0	"na"	""	""	"shared"
"ADAM9"	"ADAM9"	"ADAM9"	"orf8"	"ADAM9"	"list25_COV_list3dataset2orf"	"ADAM metallopeptidase domain 9"	"CORD9|MCMP|MDC9|Mltng"	"no"	24	2460	820	0.23426	0.32078	0.0577	0.2461	0.78746	1	0.91009	1	0.96496	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	2169	723	0.23717	0.23665	0.0439	0.1852	1	1	1	1	1	1	NA	NA	NA	""	"ADAM9"	"ADAM9_sequences_filtered_longestORFs_mafft_mincov_prank"	"ADAM9_all"	1309	24	"0.240209874933"	"0.220"	"Y"	"0.0000"	12	"167, 329, 488, 655, 684, 996, 1078, 1179, 1186, 1197, 1227, 1238"	"N"	"0.4230114312876876"	0	"na"	"Y"	"0.0006544770263830813"	5	"152, 329, 684, 1078, 1238"	"N"	"0.14255890446757777"	0	"na"	"Y"	"0.01818787710445871"	2	"152, 1078"	"ADAM9_sequences_filtered_longestORFs_mafft_prank"	"ADAM9"	1010	12	"0.151318532704"	"0.148"	"Y"	0	8	"10, 210, 491, 605, 654, 848, 896, 974"	"N"	"0.74864566136963"	0	"na"	"Y"	"3.605120651439133e-05"	5	"151, 214, 848, 898, 974"	"N"	"0.6169298233734397"	0	"na"	"Y"	"0.029599435167906"	1	"974"	"Recombination: Mostly triggered by Cter splicing variants or something like that. So OK that GARD detects that.
- PS: Yes PS on the gene from visual inspection.
"	""	"shared"
"ADAMTS1"	"ADAMTS1"	"ADAMTS1"	"orf8"	"ADAMTS1"	"list25_COV_list3dataset2orf"	"ADAM metallopeptidase with thrombospondin type 1 motif 1"	"C3-C5|METH1"	"no"	24	2910	970	0.11735	0.56648	0.0621	0.5288	1	1	1	1	1	1	NA	NA	NA	""	"ADAMTS1"	"ENSMLUG00000011098.2"	"ENSMLUT00000011104.2"	5	965	96.16580311	0.081350858	0.4665	0.59051	0.59114	-5846.284175	-5846.013643	0.762973484	NA	NA	NA	""	"ADAMTS1"	"ENSG00000154734.14"	"ENST00000517452.1"	19	128	94.53125	0.068152955	0.1427	0.27036	0.27394	-690.162298	-690.011798	0.86027773	NA	NA	NA	""	"ADAMTS1"	1	1	""	NA	NA	NA	""	""	2049	683	0.08577	0.29926	0.0259	0.3019	1	1	1	1	1	1	NA	NA	NA	""	"ADAMTS1"	"ADAMTS1_sequences_filtered_longestORFs_mafft_mincov_prank"	"ADAMTS1_all"	975	24	"0.127321473254"	"0.120"	"N"	"0.8764"	9	"20, 167, 213, 223, 237, 361, 475, 673, 915"	"N"	"0.9999998170205967"	0	"na"	"N"	"0.4285448408453565"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.5615805837295651"	0	"na"	"ADAMTS1_sequences_filtered_longestORFs_mafft_prank"	"ADAMTS1"	1049	12	"0.084190392591"	"0.090"	"N"	1	7	"187, 205, 219, 281, 299, 307, 539"	"N"	"0.9999987026139255"	0	"na"	"N"	"0.20194392359999588"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.8130196499872989"	0	"na"	""	""	"shared"
"AGPS"	"AGPS"	"AGPS"	"nsp7"	"AGPS"	"list26_COV_list4dataset2nonOrf"	"alkylglycerone phosphate synthase"	"ADAP-S|ADAS|ADHAPS|ADPS|ALDHPSY|RCDP3"	"no"	23	2082	694	0.13686	0.29057	0.0366	0.2674	0.50248	1	0.33891	0.804883333333333	0.79861	1	NA	NA	NA	""	"AGPS"	"ENSMLUG00000005113.2"	"ENSMLUT00000005117.2"	3	631	99.52456418	0.137430765	0.0486	0.06106	0.09496	-2749.523522	-2741.01313	0.000201365	-2749.441895	4.03e-05	1	"C36"	"AGPS"	"ENSG00000018510.13"	"ENST00000637633.1"	15	543	97.053407	0.114573435	0.0962	0.2451	0.25094	-2828.579642	-2825.756491	0.05941842	NA	NA	NA	""	"AGPS"	1.68e-06	0.000384393	"alkylglycerone phosphate synthase"	NA	NA	NA	"Yes"	"This gene is a member of the FAD-binding oxidoreductase/transferase type 4 family. It encodes a protein that catalyzes the second step of ether lipid biosynthesis in which acyl-dihydroxyacetonephosphate (DHAP) is converted to alkyl-DHAP by the addition of a long chain alcohol and the removal of a long-chain acid anion. The protein is localized to the inner aspect of the peroxisomal membrane and requires FAD as a cofactor. Mutations in this gene have been associated with rhizomelic chondrodysplasia punctata, type 3 and Zellweger syndrome."	1707	569	0.11542	0.16958	0.0199	0.1725	0.39736	1	0.63927	1	0.69903	1	NA	NA	NA	""	"AGPS"	"AGPS_sequences_filtered_longestORFs_mafft_mincov_prank"	"AGPS_all"	1635	24	"0.092175503676"	"0.150"	"N"	"0.9783"	5	"629, 692, 695, 710, 855"	"N"	"0.9999954831661999"	0	"na"	"Y"	"0.02890632158493913"	10	"836, 843, 856, 861, 867, 871, 872, 887, 935, 984"	"N"	"1.0"	0	"na"	"N"	"0.5147880584564917"	0	"na"	"AGPS_sequences_filtered_longestORFs_mafft_prank"	"AGPS"	774	12	"0.190968764888"	"0.183"	"N"	0.3827	3	"15, 68, 177"	"N"	"0.10924333638405746"	0	"na"	"Y"	"0.002725849758125283"	2	"177, 437"	"Y"	"0.038388398017543686"	0	""	"Y"	"0.006139573510901918"	2	"177, 437"	""	""	"shared"
"AKAP8"	"AKAP8"	"AKAP8"	"nsp12"	"AKAP8"	"list26_COV_list4dataset2nonOrf"	"A-kinase anchoring protein 8"	"AKAP 95|AKAP-8|AKAP-95|AKAP95"	"no"	24	2079	693	0.2358	0.77107	0.1348	0.5717	0.28448	0.693194936708861	0.086684	0.330429108910891	0.5762	1	10.642	1.34413	0	"noneOver_0.9"	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"AKAP8"	"ENSG00000105127.8"	"ENST00000599883.1"	17	134	89.55223881	1.423143788	0.1175	0.6778	0.83102	-975.587369	-957.555979	1.48e-08	-975.425749	2.26e-09	6	"R48, A114, Q83, A101, P120, R122"	""	NA	NA	""	NA	NA	NA	""	""	1323	441	0.25814	0.36183	0.0711	0.2754	0.0011182	0.0195685	0.0026395	0.0502846666666667	0.0050815	0.092554	2.027	6.19713	4	"369_G_0.920,406_P_0.945,437_I_0.977,438_P_0.901"	"AKAP8"	"AKAP8_sequences_filtered_longestORFs_mafft_mincov_prank"	"AKAP8_all"	1207	24	"0.207112322942"	"0.172"	"N"	"0.1358"	7	"240, 412, 1038, 1055, 1114, 1204, 1205"	"N"	"0.9999987441795993"	0	"na"	"N"	"0.5888118660773007"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.18562996914119032"	0	"na"	"AKAP8_sequences_filtered_longestORFs_mafft_prank"	"AKAP8"	1281	12	"0.237166871959"	"0.255"	"N"	0.3273	12	"263, 464, 505, 514, 607, 666, 979, 1001, 1019, 1028, 1029, 1120"	"N"	"0.9999981203026822"	0	"na"	"N"	"0.45532973557264145"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.2882289930577096"	0	"na"	""	""	"shared"
"AKAP8L"	"AKAP8L"	"AKAP8L"	"M"	"AKAP8L"	"list26_COV_list4dataset2nonOrf"	"A-kinase anchoring protein 8 like"	"HA95|HAP95|NAKAP|NAKAP95"	"no"	24	1953	651	0.08781	0.41593	0.0403	0.4594	0.37051	0.84406124260355	0.34764	0.806273493975904	1	1	NA	NA	NA	""	"AKAP8L"	"ENSMLUG00000005469.2"	"ENSMLUT00000005479.2"	10	645	92.55813953	0.104953817	0.2979	0.82808	0.83009	-4639.745585	-4638.897914	0.428411541	NA	NA	NA	""	"AKAP8L"	"ENSG00000011243.17"	"ENST00000595067.1"	18	161	85.0931677	0.276677834	0.1594	0.49321	0.60807	-927.328511	-908.930064	1.02e-08	-927.327428	1.31e-09	4	"V33, V37, S38, G135"	""	NA	NA	""	NA	NA	NA	""	""	1389	463	0.06953	0.23605	0.0192	0.276	1	1	1	1	1	1	NA	NA	NA	""	"AKAP8L"	"AKAP8L_sequences_filtered_longestORFs_mafft_mincov_prank"	"AKAP8L_all"	1561	24	"0.103745703410"	"0.093"	"N"	"0.5401"	4	"255, 281, 512, 1312"	"N"	"0.9999988312790729"	0	"na"	"Y"	"0.0004578781311533793"	3	"281, 338, 1361"	"N"	"0.7882026910928299"	0	"na"	"N"	"0.12963920929034237"	0	"na"	"AKAP8L_sequences_filtered_longestORFs_mafft_prank"	"AKAP8L"	929	12	"0.157186383073"	"0.119"	"N"	0.9874	3	"125, 646, 720"	"N"	"0.9999983786623899"	0	"na"	"N"	"0.9999998763769403"	0	"na"	"N"	"0.17084475505743885"	0	"na"	"N"	"0.24536705645298887"	0	"na"	""	""	"shared"
"AKAP9"	"AKAP9"	"AKAP9"	"nsp13"	"AKAP9"	"list26_COV_list4dataset2nonOrf"	"A-kinase anchoring protein 9"	"AKAP-9|AKAP350|AKAP450|CG-NAP|HYPERION|LQT11|MU-RMS-40.16A|PPP1R45|PRKA9|YOTIAO"	"yes"	22	11736	3912	0.35363	0.42129	0.0949	0.2682	6.8311e-05	0.0016437334375	4.9129e-05	0.0011821665625	0.000354	0.008518125	14.765	1.92832	2	"329_A_0.913,1061_I_0.924"	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"AKAP9"	0.717684616	1	""	NA	NA	NA	""	""	10671	3557	0.37099	0.33276	0.0769	0.2072	8.5402e-05	0.00298907	7.0443e-05	0.003013395	0.00044058	0.01696233	11.357	2.35214	3	"981_I_0.976,1139_E_0.962,1231_T_0.905"	"AKAP9"	"AKAP9_sequences_filtered_longestORFs_mafft_mincov_prank_part1_prank"	"AKAP9_all_part1"	5475	23	"0.366459275969"	"0.276"	"Y"	"0.0000"	0	"na"	"Y"	"2.0041988652705565e-58"	2	"2215, 2889"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"AKAP9_sequences_filtered_longestORFs_mafft_prank"	"AKAP9"	4094	11	"0.323397640332"	"0.291"	"N"	0.5138	36	"26, 27, 86, 104, 372, 396, 998, 1069, 1117, 1132, 1255, 1256, 1299, 1347, 1426, 1484, 1593, 1754, 2005, 2094, 2588, 2605, 2670, 2677, 2830, 3113, 3309, 3438, 3636, 3665, 3666, 3679, 3741, 3810, 4041, 4090"	"Y"	"0.015062313266655393"	1	"3741"	"Y"	"0.0027809814147869926"	2	"2830, 3741"	"Y"	"1.0376156792378447e-05"	3	"2830, 3741, 3810"	"Y"	"1.0213197371756032e-07"	3	"2830, 3741, 3810"	""	""	"shared"
"ALG11"	"ALG11"	"ALG11"	"nsp4"	"ALG11"	"list26_COV_list4dataset2nonOrf"	"ALG11, alpha-1,2-mannosyltransferase"	"CDG1P|GT8"	"no"	24	1479	493	0.27763	0.40966	0.0809	0.2912	0.007819	0.0627148958333333	0.0090937	0.0744909468085106	0.029234	0.233168571428571	1.814	4.73998	2	"6_R_0.921,9_C_0.932"	"ALG11"	"ENSMLUG00000028693.1"	"ENSMLUT00000026687.1"	13	493	90.87221095	0.153683232	0.6891	1.58193	1.58193	-4768.261863	-4768.261909	0.999954001	NA	NA	NA	""	"ALG11"	"ENSG00000253710.2"	"ENST00000521508.1"	18	493	94.92900609	0.167181829	0.1021	0.28339	0.2845	-2735.721105	-2734.190058	0.216309073	NA	NA	NA	""	"ALG11"	1	1	""	NA	NA	NA	""	""	1296	432	0.38277	0.28323	0.0665	0.1737	0.00016849	0.00498989615384615	0.00067321	0.0172790566666667	0.00083815	0.0248221346153846	2.029	8.5267	3	"2_R_0.991,5_C_0.993,321_Y_0.921"	"ALG11"	"ALG11_sequences_filtered_longestORFs_mafft_mincov_prank"	"ALG11_all"	1025	24	"na"	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"ALG11_sequences_filtered_longestORFs_mafft_prank"	"ALG11"	538	11	"0.194574321694"	"0.198"	"Y"	0	8	"2, 18, 36, 55, 151, 329, 478, 503"	"N"	"0.999998892437065"	0	"na"	"N"	"0.7083628774335349"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.9970044955027636"	0	"na"	""	""	"shared"
"ALG5"	"ALG5"	"ALG5"	"orf3a"	"ALG5"	"list25_COV_list3dataset2orf"	"ALG5, dolichyl-phosphate beta-glucosyltransferase"	"bA421P11.2"	"no"	22	975	325	0.19352	0.43688	0.0648	0.3349	0.026835	0.1483075	0.042491	0.205252530864198	0.090111	0.5392625	0.916	6.16754	1	"3_P_0.943"	"ALG5"	"ENSMLUG00000014698.2"	"ENSMLUT00000028515.1"	4	329	87.23404255	0.22019498	1.6961	1.54406	12.28528	-2035.78195	-2008.520181	1.45e-12	-2034.445957	5.99e-13	11	"N192, S195, S197, C198, S200, F201, F202, C203, I204, E205, Q207"	"ALG5"	"ENSG00000120697.8"	"ENST00000443765.5"	18	295	98.98305085	0.174781993	0.1284	0.40079	0.41228	-1862.583277	-1860.189329	0.091268643	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	792	264	0.15885	0.2645	0.0353	0.2224	1	1	1	1	0.99997	1	NA	NA	NA	""	"ALG5"	"ALG5_sequences_filtered_longestORFs_mafft_mincov_prank"	"ALG5_all"	906	24	"0.212882633036"	"0.206"	"N"	"1.0000"	4	"156, 302, 341, 633"	"N"	"0.9999962240602492"	0	"na"	"Y"	"0.0018432526891259207"	2	"156, 302"	"N"	"0.9990004998331715"	0	"na"	"Y"	"0.007642733131900322"	2	"156, 302"	"ALG5_sequences_filtered_longestORFs_mafft_prank"	"ALG5"	775	11	"0.107671912945"	"0.126"	"N"	0.6701	1	"39"	"N"	"0.9999999440910885"	0	"na"	"N"	"0.9999943817677858"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.9990004998331715"	0	"na"	""	""	"shared"
"ALG8"	"ALG8"	"ALG8"	"orf9c"	"ALG8"	"list26_COV_list4dataset2nonOrf"	"ALG8, alpha-1,3-glucosyltransferase"	"CDG1H|PCLD3"	"no"	24	1584	528	0.23611	0.39771	0.0654	0.2771	0.01014	0.0751416346153846	0.021603	0.134147661290323	0.044483	0.311381	0.606	7.79934	1	"115_T_0.949"	"ALG8"	"ENSMLUG00000014622.2"	"ENSMLUT00000014631.2"	10	526	99.23954373	0.154665671	0.2658	0.71391	0.71672	-3972.78088	-3971.764719	0.361981925	NA	NA	NA	""	"ALG8"	"ENSG00000159063.12"	"ENST00000615266.4"	16	468	97.86324786	0.244378089	0.1741	0.4149	0.4168	-2961.67908	-2957.461286	0.014731106	-2961.164866	0.00649648	3	"R451, Q164, V461"	"ALG8"	0.638317017	1	""	NA	NA	NA	""	""	1398	466	0.30928	0.31283	0.0604	0.1953	0.0016322	0.02244275	0.0067773	0.0899745	0.0076207	0.112844980769231	0.739	12.10586	2	"93_T_0.990,276_S_0.936"	"ALG8"	"ALG8_sequences_filtered_longestORFs_mafft_mincov_prank"	"ALG8_all"	1628	23	"0.200855712093"	"0.238"	"Y"	"0.0000"	8	"761, 889, 1029, 1043, 1046, 1138, 1496, 1501"	"N"	"0.999998840760544"	0	"na"	"N"	"0.9931549869921299"	0	"na"	"N"	"0.8676212564860656"	0	"na"	"N"	"0.5363330226131426"	0	"na"	"ALG8_sequences_filtered_longestORFs_mafft_prank"	"ALG8"	699	11	"0.198646076239"	"0.224"	"Y"	5e-04	4	"135, 360, 402, 442"	"N"	"0.9999989003482959"	0	"na"	"N"	"0.4219111924514076"	0	"na"	"N"	"0.37794749315818166"	0	"na"	"N"	"0.24907530463158667"	0	"na"	""	""	"shared"
"ANO6"	"ANO6"	"ANO6"	"M"	"ANO6"	"list24_COV_list2nonOrf"	"anoctamin 6"	"BDPLT7|SCTS|TMEM16F"	"no"	24	2799	933	0.12803	0.3476	0.0389	0.3035	0.045415	0.215355853658537	0.11244	0.397397706422018	0.14061	0.694036538461539	0.79	4.00199	3	"450_V_0.984,808_A_0.915,866_I_0.967"	"ANO6"	"ENSMLUG00000007076.2"	"ENSMLUT00000007096.2"	8	841	97.97859691	0.09941969	0.4679	1.0014	1.00509	-6738.651994	-6737.916199	0.479124404	NA	NA	NA	""	"ANO6"	"ENSG00000177119.15"	"ENST00000441606.2"	15	893	91.04143337	0.08014419	0.1228	0.25956	0.26133	-4546.756228	-4544.092163	0.069664459	NA	NA	NA	""	"ANO6"	0.693976732	1	""	NA	NA	NA	""	""	2394	798	0.11791	0.20692	0.0227	0.1926	0.89963	1	0.94901	1	0.9864	1	NA	NA	NA	""	"ANO6"	"ANO6_sequences_filtered_longestORFs_mafft_mincov_prank"	"ANO6_all"	2189	24	"0.113299720035"	"0.120"	"Y"	"0.0204"	0	"na"	"N"	"0.999999618935435"	0	"na"	"Y"	"5.110260093597033e-07"	9	"601, 883, 887, 940, 1066, 1115, 1761, 1785, 2099"	"N"	"0.9084640160674635"	0	"na"	"N"	"0.1510718088364588"	0	"na"	"ANO6_sequences_filtered_longestORFs_mafft_prank"	"ANO6"	1274	11	"0.148195788999"	"0.156"	"Y"	0.0018	8	"250, 634, 808, 832, 987, 1125, 1208, 1245"	"N"	"0.9999985065335079"	0	"na"	"Y"	"0.006517262523609501"	7	"301, 535, 634, 808, 810, 1125, 1253"	"N"	"1.0"	0	"na"	"N"	"1.0"	0	"na"	""	""	"shared"
"AP2A2"	"AP2A2"	"AP2A2"	"nsp10"	"AP2A2"	"list24_COV_list2nonOrf"	"adaptor related protein complex 2 subunit alpha 2"	"ADTAB|CLAPA2|HIP-9|HIP9|HYPJ"	"no"	23	2826	942	0.0316	0.62439	0.0251	0.7931	1	1	1	1	1	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"AP2A2"	0.95561292	1	""	NA	NA	NA	""	""	1776	592	0.03047	0.26984	0.0109	0.357	1	1	1	1	0.99999	1	NA	NA	NA	""	"AP2A2"	"AP2A2_sequences_filtered_longestORFs_mafft_mincov_prank_part1_prank"	"AP2A2_all_part1"	1531	24	"0.027643575412"	"0.029"	"Y"	"0.0000"	4	"88, 420, 424, 1090"	"N"	"0.9999998315543195"	0	"na"	"Y"	"1.8095362296896085e-06"	3	"1017, 1091, 1368"	"N"	"1.0"	0	"na"	"Y"	"0.0496379309806638"	0	""	"AP2A2_sequences_filtered_longestORFs_D102gp2_prank"	"AP2A2_102-2"	1281	9	"0.022994966217"	"0.023"	"N"	0.2936	1	"930"	"N"	"0.9999999991568984"	0	"na"	"Y"	"0.0192463155887868"	1	"915"	"N"	"1.0"	0	"na"	"N"	"0.9980019986669264"	0	"na"	"Sequences in 2 duplication groups: g2 and remaining."	""	"shared"
"AP2M1"	"AP2M1"	"AP2M1"	"nsp10"	"AP2M1"	"list24_COV_list2nonOrf"	"adaptor related protein complex 2 subunit mu 1"	"AP50|CLAPM1|mu2"	"no"	23	1308	436	0.00997	0.22811	0.0031	0.3064	1	1	1	1	0.99964	1	NA	NA	NA	""	"AP2M1"	"ENSMLUG00000013541.2"	"ENSMLUT00000013545.2"	11	442	99.32126697	0.009907453	0.2441	0.42519	0.46649	-2586.621611	-2570.307583	8.22e-08	-2576.454425	0.000454494	1	"P192"	"AP2M1"	"ENSG00000161203.13"	"ENST00000621863.4"	3	435	98.3908046	0.098695777	0.155	0.17927	0.17927	-2042.490635	-2042.490702	0.999933002	NA	NA	NA	""	"AP2M1"	0.973065434	1	""	NA	NA	NA	""	""	1017	339	1e-04	0.12605	0	0.1923	1	1	1	1	0.99883	1	NA	NA	NA	""	"AP2M1"	"AP2M1_sequences_filtered_longestORFs_mafft_mincov_prank"	"AP2M1_all"	584	24	"0.072008517084"	"0.060"	"Y"	"0.0120"	1	"368"	"N"	"0.9999990882533503"	0	"na"	"N"	"0.9999999822571227"	0	"na"	"N"	"0.30635828375793595"	0	"na"	"N"	"1.0"	0	"na"	"AP2M1_sequences_filtered_longestORFs_mafft_prank"	"AP2M1"	447	12	"0.001000000000"	"0.000"	"N"	1	0	"na"	"N"	"0.999999999992724"	0	"na"	"N"	"0.999996327206114"	0	"na"	"N"	"0.9970044955036704"	0	"na"	"N"	"0.9970044955036704"	0	"na"	""	""	"shared"
"AP3B1"	"AP3B1"	"AP3B1"	"E"	"AP3B1"	"list24_COV_list2nonOrf"	"adaptor related protein complex 3 subunit beta 1"	"ADTB3|ADTB3A|HPS|HPS2|PE"	"no"	23	3285	1095	0.15982	0.32386	0.0465	0.2908	0.15456	0.491781818181818	0.3584	0.812938823529412	0.56919	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"AP3B1"	"ENSG00000132842.13"	"ENST00000522901.1"	18	154	93.50649351	0.248401132	0.1666	0.51825	0.70943	-967.479082	-941.687639	6.29e-12	-966.682479	1.55e-12	3	"S144, L145, L148"	""	NA	NA	""	NA	NA	NA	""	""	2955	985	0.18044	0.26164	0.0413	0.2289	0.78874	1	0.87325	1	0.96811	1	NA	NA	NA	""	"AP3B1"	"AP3B1_sequences_filtered_longestORFs_mafft_mincov_prank"	"AP3B1_all"	2158	24	"0.165149043217"	"0.158"	"N"	"1.0000"	9	"593, 744, 746, 869, 895, 952, 999, 1425, 1549"	"N"	"0.9999998548792169"	0	"na"	"Y"	"0.01524795293177966"	3	"422, 898, 972"	"N"	"0.8967304174978962"	0	"na"	"N"	"0.13655879834501614"	0	"na"	"AP3B1_sequences_filtered_longestORFs_mafft_prank"	"AP3B1"	1656	12	"0.195164611351"	"0.173"	"N"	0.1654	10	"37, 304, 423, 775, 824, 867, 1305, 1326, 1329, 1334"	"N"	"0.8009669258447036"	0	"na"	"Y"	"0.00033704386982924165"	5	"304, 734, 767, 883, 1334"	"N"	"0.4597832942305451"	0	"na"	"N"	"0.1470474434083764"	0	"na"	""	""	"shared"
"ARF6"	"ARF6"	"ARF6"	"nsp15"	"ARF6"	"list26_COV_list4dataset2nonOrf"	"ADP ribosylation factor 6"	"-"	"no"	23	528	176	0.00829	0.16737	0.0024	0.2869	1	1	1	1	0.9997	1	NA	NA	NA	""	"ARF6"	"ENSMLUG00000010869.1"	"ENSMLUT00000010859.1"	14	176	94.31818182	0.025085904	0.1572	0.29711	0.33603	-890.50429	-887.871119	0.071850263	NA	NA	NA	""	"ARF6"	"ENSG00000165527.6"	"ENST00000298316.6"	18	176	98.29545455	0.00434569	0.1225	0.16533	0.16533	-826.751641	-826.751992	0.999649062	NA	NA	NA	""	"ARF6"	0.085998489	0.881444321	""	NA	NA	NA	""	""	372	124	0.02028	0.0951	0.0034	0.1664	1	1	1	1	0.99992	1	NA	NA	NA	""	"ARF6"	"ARF6_sequences_filtered_longestORFs_D146gp2_prank"	"ARF6_146-2"	175	17	"0.031678100936"	"0.024"	"N"	"0.9989"	0	"na"	"N"	"0.9999999868317674"	0	"na"	"N"	"0.999990031600195"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.9990004998333987"	0	"na"	"ARF6_sequences_filtered_longestORFs_D116gp1_prank"	"ARF6_116-1"	175	11	"0.025386603383"	"0.011"	"N"	0.9143	0	"na"	"N"	"0.9999999986185912"	0	"na"	"N"	"0.9999800265648641"	0	"na"	"N"	"1.0"	0	"na"	"N"	"1.0"	0	"na"	""	""	"shared"
"ARL6IP6"	"ARL6IP6"	"ARL6IP6"	"orf3a"	"ARL6IP6"	"list25_COV_list3dataset2orf"	"ADP ribosylation factor like GTPase 6 interacting protein 6"	"AIP-6|AIP6|PFAAP1"	"no"	23	681	227	0.32853	0.56407	0.1176	0.358	0.42489	0.928785310734463	0.57486	1	0.7298	1	NA	NA	NA	""	"ARL6IP6"	"ENSMLUG00000023268.1"	"ENSMLUT00000029257.1"	9	227	93.39207048	0.231315309	0.3793	1.0818	1.0818	-1885.798414	-1885.79842	0.999994	NA	NA	NA	""	"ARL6IP6"	"ENSG00000177917.10"	"ENST00000425034.5"	13	38	92.10526316	0.190198357	0.1732	0.26435	0.26406	-188.146347	-188.139579	0.993254851	NA	NA	NA	""	"ARL6IP6"	1	1	""	NA	NA	NA	""	""	447	149	0.4519	0.35247	0.0871	0.1927	0.40967	1	0.6991	1	0.71817	1	NA	NA	NA	""	"ARL6IP6"	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	"ARL6IP6_sequences_filtered_longestORFs_mafft_prank"	"ARL6IP6"	408	12	"0.266455224369"	"0.286"	"Y"	0.0108	4	"11, 13, 29, 78"	"N"	"0.9999997679401801"	0	"na"	"N"	"0.3041011726478065"	0	"na"	"N"	"0.7139088399027278"	0	"na"	"N"	"0.2666015652764892"	0	"na"	""	""	"onlybats"
"ATE1"	"ATE1"	"ATE1"	"nsp8"	"ATE1"	"list24_COV_list2nonOrf"	"arginyltransferase 1"	"-"	"yes"	24	1557	519	0.23406	0.42514	0.0736	0.3146	0.0024879	0.0252063552631579	0.0024351	0.0253382027027027	0.010541	0.106796973684211	1.571	4.4187	1	"173_V_0.977"	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"ATE1"	1	1	""	NA	NA	NA	""	""	1284	428	0.31286	0.26291	0.0555	0.1774	0.46648	1	0.65679	1	0.7674	1	NA	NA	NA	""	"ATE1"	"ATE1_sequences_filtered_longestORFs_mafft_mincov_prank_part2_prank"	"ATE1_all_part2"	4516	23	"0.216828954410"	"0.243"	"Y"	"0.0000"	8	"622, 623, 899, 1437, 1459, 1509, 3392, 3414"	"N"	"0.5004846977749202"	0	"na"	"Y"	"0.03708616346868175"	1	"1459"	"Y"	"8.916695916049465e-05"	6	"622, 623, 625, 627, 628, 1459"	"na"	"na"	0	"na"	"ATE1_bat_select_cut_mafft_prank"	"ATE1"	571	11	"0.155711039916073"	"0.147"	"N"	0.0691	22	"11, 17, 18, 27, 28, 29, 30, 108, 176, 223, 242, 243, 248, 251, 330, 346, 349, 350, 357, 361, 364, 571"	"N"	"0.999999862850937"	0	"na"	"N"	"0.99998620608549"	0	"na"	"N"	"1.0"	0	"na"	"N"	"1.0"	0	"na"	""	""	"shared"
"ATP13A3"	"ATP13A3"	"ATP13A3"	"nsp6"	"ATP13A3"	"list24_COV_list2nonOrf"	"ATPase 13A3"	"AFURS1"	"no"	23	3681	1227	0.14578	0.37782	0.0489	0.3357	0.06395	0.267616847826087	0.17447	0.525615234375	0.211	0.93789540229885	0.081	16.27142	3	"1050_Q_0.963,1116_I_0.936,1158_L_0.901"	"ATP13A3"	"ENSMLUG00000014164.2"	"ENSMLUT00000014172.2"	11	1227	99.75550122	0.13286808	0.2049	0.59575	0.59732	-8654.442737	-8653.486754	0.38443406	NA	NA	NA	""	"ATP13A3"	"ENSG00000133657.14"	"ENST00000619199.4"	13	702	97.57834758	0.089688782	0.1611	0.35125	0.35206	-4002.934816	-4001.403875	0.216332003	NA	NA	NA	""	"ATP13A3"	0.649032564	1	""	NA	NA	NA	""	""	3153	1051	0.19374	0.26814	0.0421	0.2172	0.43893	1	0.66813	1	0.74099	1	NA	NA	NA	""	"ATP13A3"	"ATP13A3_sequences_filtered_longestORFs_mafft_mincov_prank"	"ATP13A3_all"	1667	24	"0.144099275342"	"0.141"	"N"	"0.5529"	3	"115, 157, 1530"	"N"	"0.49438735782234966"	0	"na"	"Y"	"7.555004772586708e-10"	16	"31, 88, 99, 102, 127, 652, 1139, 1148, 1149, 1150, 1156, 1157, 1266, 1273, 1315, 1316"	"N"	"0.43127902868882784"	0	"na"	"Y"	"0.03350703038270436"	3	"1149, 1150, 1316"	"ATP13A3_sequences_filtered_longestORFs_mafft_prank"	"ATP13A3"	1346	12	"0.148231630010"	"0.144"	"N"	0.6808	2	"1075, 1277"	"N"	"0.999999512150799"	0	"na"	"N"	"0.1808898839033816"	0	"na"	"N"	"0.9990004998331715"	0	"na"	"N"	"1.0"	0	"na"	""	""	"shared"
"ATP1B1"	"ATP1B1"	"ATP1B1"	"M"	"ATP1B1"	"list26_COV_list4dataset2nonOrf"	"ATPase Na+/K+ transporting subunit beta 1"	"ATP1B"	"no"	24	912	304	0.11853	0.30643	0.0338	0.2853	0.24838	0.641787248322148	0.3232	0.787544303797468	0.51221	1	NA	NA	NA	""	"ATP1B1"	"ENSMLUG00000010015.2"	"ENSMLUT00000010005.2"	6	304	88.48684211	0.157161129	0.7416	1.55528	1.55531	-2399.530233	-2399.530829	0.999404178	NA	NA	NA	""	"ATP1B1"	"ENSG00000143153.12"	"ENST00000494797.1"	4	130	100	0.142624521	0.1377	0.19814	0.19814	-648.606372	-648.606401	0.999971	NA	NA	NA	""	"ATP1B1"	1	1	""	NA	NA	NA	""	""	744	248	0.18405	0.20344	0.0316	0.1718	0.062328	0.374941875	0.15669	0.900382835820896	0.17402	1	0.945	11.02287	2	"163_V_0.972,188_S_0.962"	"ATP1B1"	"ATP1B1_sequences_filtered_longestORFs_mafft_mincov_prank"	"ATP1B1_all"	399	25	"0.119938698901"	"0.110"	"N"	"0.3059"	2	"150, 331"	"N"	"0.9999969665860213"	0	"na"	"N"	"0.0946132023658145"	0	"na"	"N"	"1.0"	0	"na"	"N"	"1.0"	0	"na"	"ATP1B1_sequences_filtered_longestORFs_mafft_prank"	"ATP1B1"	730	12	"0.088215036349"	"0.087"	"Y"	1e-04	8	"26, 61, 63, 146, 530, 654, 661, 695"	"N"	"0.9999999800343178"	0	"na"	"Y"	"0.020573411749334792"	1	"520"	"N"	"1.0"	0	"na"	"N"	"0.09817536113918371"	0	"na"	""	""	"shared"
"ATP5MG"	"ATP5MG"	"ATP5L"	"nsp6"	"ATP5L"	"list26_COV_list4dataset2nonOrf"	"ATP synthase membrane subunit g"	"ATP5JG|ATP5L"	"no"	24	312	104	0.26952	0.24062	0.0461	0.171	0.18493	0.556234765625	0.37335	0.840583333333333	0.41482	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	270	90	0.2522	0.11696	0.0215	0.0854	1	1	1	1	1	1	NA	NA	NA	""	"ATP5MG"	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	"ATP5MG_sequences_filtered_longestORFs_mafft_prank"	"ATP5MG"	193	12	"0.482859629606"	"0.466"	"N"	0.1388	0	"na"	"N"	"0.7895710018690529"	0	"na"	"N"	"0.22670251885481518"	0	"na"	"N"	"0.7672059499759533"	0	"na"	"N"	"0.11394948988008499"	0	"na"	""	""	"onlybats"
"ATP6AP1"	"ATP6AP1"	"ATP6AP1"	"nsp6"	"ATP6AP1"	"list26_COV_list4dataset2nonOrf"	"ATPase H+ transporting accessory protein 1"	"16A|ATP6IP1|ATP6S1|Ac45|CF2|VATPS1|XAP-3|XAP3"	"no"	24	1443	481	0.13691	0.58173	0.0767	0.5605	0.12109	0.427385	0.28155	0.722645	1	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"ATP6AP1"	"ENSG00000071553.16"	"ENST00000619046.4"	18	282	91.4893617	0.096121814	0.2011	0.41865	0.41897	-1572.757194	-1572.738926	0.981897848	NA	NA	NA	""	"ATP6AP1"	0.421511211	1	""	NA	NA	NA	""	""	975	325	0.16921	0.29404	0.0445	0.263	0.13705	0.676464743589744	0.29241	1	0.37443	1	NA	NA	NA	""	"ATP6AP1"	"ATP6AP1_sequences_filtered_longestORFs_mafft_mincov_prank"	"ATP6AP1_all"	523	24	"0.197452551824"	"0.161"	"Y"	"0.0032"	11	"21, 30, 31, 49, 121, 152, 303, 304, 305, 383, 445"	"N"	"0.9999985271744595"	0	"na"	"N"	"0.6083417436309067"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.2109782988179196"	0	"na"	"ATP6AP1_sequences_filtered_longestORFs_mafft_prank"	"ATP6AP1"	512	12	"0.239150464842"	"0.191"	"Y"	0.0164	3	"34, 51, 293"	"N"	"0.16380542242532112"	0	"na"	"Y"	"0.0005380477529293749"	4	"9, 332, 335, 428"	"Y"	"0.04943977583125145"	0	""	"Y"	"0.002891441824662203"	1	"335"	""	""	"shared"
"ATP6V1A"	"ATP6V1A"	"ATP6V1A"	"M"	"ATP6V1A"	"list26_COV_list4dataset2nonOrf"	"ATPase H+ transporting V1 subunit A"	"ARCL2D|ATP6A1|ATP6V1A1|HO68|IECEE3|VA68|VPP2|Vma1"	"no"	24	1854	618	0.03667	0.3035	0.0122	0.3318	0.8936	1	0.98854	1	1	1	NA	NA	NA	""	"ATP6V1A"	"ENSMLUG00000003808.2"	"ENSMLUT00000003810.2"	10	618	99.51456311	0.036816946	0.2405	0.47687	0.47455	-3838.66641	-3838.735925	0.932846141	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"ATP6V1A"	1	1	""	NA	NA	NA	""	""	1536	512	0.05058	0.18094	0.0094	0.1854	0.47978	1	0.29455	1	0.77909	1	NA	NA	NA	""	"ATP6V1A"	"ATP6V1A_sequences_filtered_longestORFs_mafft_mincov_prank"	"ATP6V1A_all"	644	23	"0.042230077137"	"0.034"	"Y"	"0.0002"	6	"143, 175, 181, 229, 318, 477"	"N"	"0.9999997399363904"	0	"na"	"N"	"0.9380739331044443"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.8228346580562579"	0	"na"	"ATP6V1A_sequences_filtered_longestORFs_mafft_prank"	"ATP6V1A"	702	12	"0.037080871357"	"0.034"	"N"	0.9146	1	"175"	"N"	"0.9999999436427076"	0	"na"	"Y"	"0.0009886079904051323"	6	"18, 112, 175, 226, 648, 675"	"N"	"1.0"	0	"na"	"N"	"0.6784123432635414"	0	"na"	""	""	"shared"
"BAG5"	"BAG5"	"BAG5"	"orf9b"	"BAG5"	"list25_COV_list3dataset2orf"	"BCL2 associated athanogene 5"	"BAG-5"	"no"	24	1467	489	0.06218	0.46292	0.0308	0.4953	1	1	0.97165	1	1	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"BAG5"	"ENSG00000166170.9"	"ENST00000299204.4"	19	448	99.33035714	0.045009369	0.2604	0.40094	0.40095	-2802.170187	-2802.171045	0.999142368	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	1143	381	0.08204	0.25975	0.0203	0.247	1	1	0.77838	1	1	1	NA	NA	NA	""	"BAG5"	"BAG5_sequences_filtered_longestORFs_mafft_mincov_prank"	"BAG5_all"	926	24	"0.084971970061"	"0.089"	"N"	"1.0000"	1	"636"	"N"	"0.9999978009988431"	0	"na"	"N"	"0.9999999326018973"	0	"na"	"N"	"1.0"	0	"na"	"N"	"1.0"	0	"na"	"BAG5_sequences_filtered_longestORFs_mafft_prank"	"BAG5"	471	12	"0.054098018415"	"0.059"	"N"	1	0	"na"	"N"	"0.9999991971093135"	0	"na"	"N"	"0.44374587543466104"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.9733612415242943"	0	"na"	""	""	"shared"
"BCKDK"	"BCKDK"	"BCKDK"	"nsp12"	"BCKDK"	"list24_COV_list2nonOrf"	"branched chain ketoacid dehydrogenase kinase"	"BCKDKD|BDK"	"no"	23	1239	413	0.06079	0.51593	0.0358	0.5888	1	1	1	1	1	1	NA	NA	NA	""	"BCKDK"	"ENSMLUG00000004771.2"	"ENSMLUT00000004771.2"	11	413	99.27360775	0.064361817	0.4158	0.82725	0.82725	-3137.031641	-3137.031697	0.999944002	NA	NA	NA	""	"BCKDK"	"ENSG00000103507.13"	"ENST00000567682.1"	7	145	100	0.239937421	0.1681	0.36019	0.37332	-819.027497	-818.724696	0.738746092	NA	NA	NA	""	"BCKDK"	1	1	""	NA	NA	NA	""	""	855	285	0.06821	0.26047	0.0194	0.2848	1	1	1	1	1	1	NA	NA	NA	""	"BCKDK"	"BCKDK_sequences_filtered_longestORFs_mafft_mincov_prank"	"BCKDK_all"	569	23	"0.059177238490"	"0.052"	"N"	"0.4081"	0	"na"	"N"	"0.9999997549239497"	0	"na"	"Y"	"0.02137003412264926"	1	"27"	"N"	"1.0"	0	"na"	"N"	"0.8658877480590035"	0	"na"	"BCKDK_sequences_filtered_longestORFs_mafft_prank"	"BCKDK"	519	12	"0.048231141252"	"0.053"	"N"	0.0878	0	"na"	"N"	"0.9999996548177165"	0	"na"	"N"	"0.05497947292168534"	0	"na"	"N"	"1.0"	0	"na"	"N"	"1.0"	0	"na"	""	""	"shared"
"BCS1L"	"BCS1L"	"BCS1L"	"orf9c"	"BCS1L"	"list24_COV_list2nonOrf"	"BCS1 homolog, ubiquinol-cytochrome c reductase complex chaperone"	"BCS|BCS1|BJS|FLNMS|GRACILE|Hs.6719|MC3DN1|PTD|h-BCS|h-BCS1"	"no"	22	1260	420	0.12122	0.32645	0.034	0.2808	0.010149	0.0751416346153846	0.03633	0.185225526315789	0.037167	0.27517875	1.669	4.98354	2	"295_V_0.934,383_H_0.986"	"BCS1L"	"ENSMLUG00000001520.2"	"ENSMLUT00000001514.2"	14	418	97.6076555	0.122598675	0.3307	1.00355	1.00415	-3634.450422	-3634.398039	0.948965344	NA	NA	NA	""	"BCS1L"	"ENSG00000074582.12"	"ENST00000436603.1"	18	121	95.04132231	0.043897625	0.2035	0.32812	0.32686	-655.798553	-656.684909	0.412154912	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	1032	344	0.12904	0.19338	0.0216	0.1671	0.44991	1	1	1	1	1	NA	NA	NA	""	"BCS1L"	"BCS1L_sequences_filtered_longestORFs_mafft_mincov_prank"	"BCS1L_all"	774	24	"0.092276958623"	"0.094"	"Y"	"0.0308"	5	"396, 705, 717, 741, 749"	"N"	"0.17084385208538738"	0	"na"	"Y"	"2.2634385460968778e-05"	3	"650, 738, 741"	"Y"	"0.0039580650376051145"	2	"738, 741"	"Y"	"0.0003752192635744316"	3	"650, 738, 741"	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	"onlyprimates"
"BRD2"	"BRD2"	"BRD2"	"E"	"BRD2"	"list24_COV_list2nonOrf"	"bromodomain containing 2"	"BRD2-IT1|D6S113E|FSH|FSRG1|NAT|O27.1.1|RING3|RNF3"	"no"	22	2409	803	0.08383	0.40346	0.0305	0.3644	0.3639	0.838931137724551	0.6622	1	0.94347	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	2064	688	0.08073	0.26902	0.0195	0.2413	0.61428	1	0.66143	1	0.88048	1	NA	NA	NA	""	"BRD2"	"BRD2_sequences_filtered_longestORFs_mafft_mincov_prank"	"BRD2_all"	1016	24	"0.193797256005"	"0.204"	"N"	"0.9847"	5	"251, 282, 387, 583, 890"	"N"	"0.9999999632582337"	0	"na"	"N"	"0.960398562611789"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.5288766765053515"	0	"na"	"BRD2_sequences_filtered_longestORFs_mafft_prank"	"BRD2"	804	11	"0.047991384820"	"0.046"	"N"	1	0	"na"	"N"	"0.9999986952888646"	0	"na"	"Y"	"0.005426137080708187"	3	"597, 632, 767"	"N"	"nan"	0	"na"	"N"	"0.2993924573097573"	0	"na"	""	""	"shared"
"BRD4"	"BRD4"	"BRD4"	"E"	"BRD4"	"list24_COV_list2nonOrf"	"bromodomain containing 4"	"CAP|HUNK1|HUNKI|MCAP"	"no"	21	4113	1371	0.06065	0.41153	0.0251	0.4132	0.29969	0.7211290625	0.042907	0.205252530864198	0.57425	1	4.429	1.50441	1	"583_A_0.960"	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"BRD4"	"ENSG00000141867.17"	"ENST00000630599.2"	13	147	95.23809524	0.011362622	0.0798	0.08819	0.08798	-625.441726	-625.428566	0.986926214	NA	NA	NA	""	"BRD4"	0.99680847	1	""	NA	NA	NA	""	""	3135	1045	0.09949	0.21838	0.021	0.2106	0.00033419	0.00761416764705882	0.001193	0.0270179411764706	0.0016057	0.03885371875	4.659	2.97219	3	"756_Q_0.960,780_Q_0.960,781_Q_0.959"	"BRD4"	"BRD4_sequences_filtered_longestORFs_mafft_mincov_prank"	"BRD4_all"	3149	24	"0.071135736852"	"0.048"	"Y"	"0.0000"	1	"1320"	"Y"	"9.427433477380182e-17"	1	"1320"	"Y"	"9.531062018384712e-15"	2	"758, 1320"	"N"	"0.8958341352960069"	0	"na"	"Y"	"2.651786420363759e-38"	1	"1320"	"BRD4_sequences_filtered_longestORFs_mafft_prank"	"BRD4"	1700	11	"0.060100406648"	"0.058"	"Y"	0	4	"565, 906, 907, 1246"	"N"	"0.999998199715066"	0	"na"	"Y"	"0.032744254083124216"	0	""	"N"	"1.0"	0	"na"	"N"	"1.0"	0	"na"	""	""	"shared"
"BZW2"	"BZW2"	"BZW2"	"M"	"BZW2"	"list26_COV_list4dataset2nonOrf"	"basic leucine zipper and W2 domains 2"	"HSPC028|MST017|MSTP017"	"no"	23	1260	420	1e-04	0.2139	0	0.2168	0.99661	1	1	1	0.99859	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"BZW2"	0.94738989	1	""	NA	NA	NA	""	""	1074	358	1e-04	0.1059	0	0.1084	1	1	1	1	0.99933	1	NA	NA	NA	""	"BZW2"	"BZW2_sequences_filtered_longestORFs_mafft_mincov_prank_part2_prank"	"BZW2_all_part2"	634	24	"0.010116694525"	"0.052"	"Y"	"0.0000"	2	"390, 396"	"N"	"0.9999999998335625"	0	"na"	"N"	"0.9999800102652258"	0	"na"	"Y"	"8.438891236882323e-10"	3	"6, 22, 81"	"Y"	"4.994993061121576e-11"	3	"6, 22, 81"	"BZW2_sequences_filtered_longestORFs_mafft_prank_part2_prank"	"BZW2_part2"	468	11	"0.025196976652"	"0.026"	"N"	1	0	"na"	"N"	"0.9999999890487744"	0	"na"	"N"	"0.9999999748170015"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.9990004998331715"	0	"na"	""	""	"shared"
"C1orf50"	"C1orf50"	"C1orf50"	"nsp13"	"C1orf50"	"list26_COV_list4dataset2nonOrf"	"chromosome 1 open reading frame 50"	"-"	"no"	22	600	200	0.3773	0.34911	0.0779	0.2064	1	1	1	1	0.51939	1	NA	NA	NA	""	"C1orf50"	"ENSMLUG00000013623.2"	"ENSMLUT00000013623.2"	12	199	97.48743719	0.310808096	0.2794	1.03296	1.03184	-1795.529196	-1795.400335	0.879096151	NA	NA	NA	""	"C1orf50"	"ENSG00000164008.14"	"ENST00000372525.5"	14	200	98.5	0.266935677	0.0986	0.24533	0.24533	-1096.064024	-1096.064068	0.999956001	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	486	162	0.37034	0.23435	0.0497	0.1343	1	1	1	1	0.99998	1	NA	NA	NA	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
"CCDC86"	"CCDC86"	"CCDC86"	"nsp8"	"CCDC86"	"list26_COV_list4dataset2nonOrf"	"coiled-coil domain containing 86"	"-"	"no"	24	1083	361	0.4232	0.68187	0.1624	0.3837	1	1	0.9155	1	1	1	NA	NA	NA	""	"CCDC86"	"ENSMLUG00000005025.2"	"ENSMLUT00000005026.2"	10	360	88.05555556	0.380392898	0.4329	2.01267	2.01267	-3831.995145	-3831.995149	0.999996	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	756	252	0.47195	0.448	0.1119	0.2371	0.049749	0.353647	0.13949	0.82621	0.14587	1	28.144	1.9259	2	"103_A_0.949,157_K_0.911"	"CCDC86"	"CCDC86_sequences_filtered_longestORFs_mafft_mincov_prank"	"CCDC86_all"	409	23	"0.490439505516"	"0.397"	"N"	"1.0000"	9	"24, 56, 70, 133, 159, 164, 189, 242, 404"	"N"	"0.999999920300073"	0	"na"	"N"	"0.943786792563708"	0	"na"	"N"	"0.99900049983408"	0	"na"	"N"	"0.9990004998331715"	0	"na"	"CCDC86_sequences_filtered_longestORFs_mafft_prank"	"CCDC86"	426	10	"0.479979345119"	"0.370"	"N"	0.9932	9	"27, 41, 49, 67, 123, 191, 213, 217, 244"	"N"	"0.9999994642868457"	0	"na"	"N"	"0.972082322722496"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.9436499474368054"	0	"na"	"Not clear to me why not detected under PS.
Aln is good. Lots of PS typical marks.
"	""	"shared"
"CDK5RAP2"	"CDK5RAP2"	"CDK5RAP2"	"nsp13"	"CDK5RAP2"	"list26_COV_list4dataset2nonOrf"	"CDK5 regulatory subunit associated protein 2"	"C48|Cep215|MCPH3"	"yes"	25	5700	1900	0.58312	0.61288	0.1681	0.2882	0.00024834	0.00407217708333333	0.00060022	0.009243388	0.0011099	0.01942325	1.803	4.24322	2	"508_R_0.994,613_S_0.957"	"CDK5RAP2"	"ENSMLUG00000004984.2"	"ENSMLUT00000026972.1"	7	901	98.6681465	0.35046295	0.3523	1.11238	1.15965	-7755.145506	-7743.162832	6.25e-06	-7754.009258	3.2e-06	4	"R684, V651, K660, H661"	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"CDK5RAP2"	0.039812298	0.586040651	""	NA	NA	NA	""	""	4623	1541	0.56544	0.39808	0.1081	0.1911	0.24847	1	0.37909	1	0.51317	1	NA	NA	NA	""	"CDK5RAP2"	"CDK5RAP2_sequences_filtered_longestORFs_mafft_mincov_prank"	"CDK5RAP2_all"	2658	25	"0.523933602623"	"0.548"	"Y"	"0.0037"	0	"na"	"Y"	"0.00021168144979182054"	1	"523"	"Y"	"1.1231640807620076e-06"	4	"523, 611, 1227, 1252"	"Y"	"4.446072472096559e-12"	2	"523, 611"	"Y"	"4.2180017118599783e-16"	9	"523, 611, 1149, 1182, 1227, 1252, 1291, 2179, 2452"	"CDK5RAP2_sequences_filtered_longestORFs_mafft_prank"	"CDK5RAP2"	2180	12	"0.441350523278"	"0.446"	"N"	0.7361	33	"132, 133, 312, 316, 317, 350, 454, 669, 802, 843, 859, 868, 1016, 1029, 1071, 1118, 1196, 1197, 1220, 1223, 1226, 1281, 1320, 1326, 1352, 1353, 1480, 1491, 1537, 1852, 1881, 1969, 2097"	"N"	"0.05666528271531974"	0	"na"	"Y"	"0.0014684527873602153"	0	""	"Y"	"0.0004989523289218173"	0	""	"Y"	"5.228349530650632e-07"	3	"692, 998, 1842"	""	""	"shared"
"CENPF"	"CENPF"	"CENPF"	"nsp13"	"CENPF"	"list26_COV_list4dataset2nonOrf"	"centromere protein F"	"CENF|CILD31|PRO1779|STROMS|hcp-1"	"yes"	21	9351	3117	0.49349	0.50557	0.1309	0.2652	5.9335e-06	0.0002076725	2.033e-05	0.000602080769230769	3.7031e-05	0.00118807791666667	5.064	3.36994	7	"918_D_0.918,1364_I_0.975,1705_N_0.930,1728_S_0.901,1976_T_0.971,3073_P_0.919,3107_S_0.902"	"CENPF"	"ENSMLUG00000017038.2"	"ENSMLUT00000017046.2"	8	3083	92.83165748	0.263203446	0.4624	1.16969	1.18996	-26308.11871	-26290.23285	1.71e-08	-26301.2531	2.67e-06	4	"S3001, T3002, S3004, C1367"	"CENPF"	"ENSG00000117724.12"	"ENST00000614578.1"	16	176	71.59090909	0.394049646	0.1534	0.47046	0.47825	-851.71129	-851.421955	0.748761328	NA	NA	NA	""	"CENPF"	0.004868655	0.163786924	""	NA	NA	NA	""	""	8244	2748	0.53617	0.38435	0.104	0.194	0.00066123	0.01212255	0.0027428	0.0502846666666667	0.0032003	0.061605775	1.472	6.00619	2	"820_D_0.933,1740_T_0.968"	"CENPF"	"CENPF_sequences_filtered_longestORFs_mafft_mincov_prank"	"CENPF_all"	3358	23	"0.454025419172"	"0.442"	"N"	"0.5951"	69	"37, 77, 290, 297, 306, 314, 316, 448, 459, 582, 769, 855, 878, 881, 900, 942, 987, 1001, 1107, 1174, 1200, 1209, 1217, 1232, 1242, 1252, 1261, 1303, 1404, 1447, 1465, 1499, 1604, 1714, 1730, 1736, 1845, 1849, 1874, 1901, 1910, 1911, 1929, 1941, 2050, 2067, 2113, 2158, 2199, 2323, 2410, 2412, 2418, 2461, 2480, 2562, 2596, 2629, 2700, 2722, 2761, 2967, 3033, 3050, 3053, 3277, 3283, 3305, 3312"	"N"	"0.999992835412031"	0	"na"	"N"	"0.10001252251812066"	0	"na"	"Y"	"2.72352082703828e-05"	0	""	"Y"	"2.3803935637834017e-09"	0	""	"CENPF_sequences_filtered_longestORFs_mafft_prank"	"CENPF"	3255	10	"0.395606612250"	"0.392"	"N"	0.2913	56	"303, 389, 453, 459, 460, 463, 770, 772, 893, 993, 1031, 1079, 1094, 1201, 1216, 1241, 1266, 1287, 1311, 1522, 1538, 1539, 1541, 1599, 1666, 1694, 1698, 1707, 1709, 1715, 1766, 1810, 1833, 1850, 1857, 1895, 1896, 1998, 2076, 2238, 2320, 2371, 2449, 2545, 2622, 2643, 2650, 2793, 2865, 2947, 2991, 3010, 3024, 3122, 3213, 3221"	"N"	"0.9999964200315351"	0	"na"	"N"	"0.9936380594557517"	0	"na"	"N"	"0.42485812046202354"	0	"na"	"Y"	"0.0007087554594669269"	0	""	""	""	"shared"
"CEP112"	"CEP112"	"CEP112"	"nsp13"	"CEP112"	"list26_COV_list4dataset2nonOrf"	"centrosomal protein 112"	"CCDC46|MACOCO"	"no"	23	2868	956	0.27672	0.36328	0.0696	0.2516	0.49425	1	0.78137	1	0.82637	1	NA	NA	NA	""	"CEP112"	"ENSMLUG00000013982.2"	"ENSMLUT00000013991.2"	8	799	99.12390488	0.163141077	0.3459	0.77965	0.78737	-6120.488871	-6118.808518	0.186308198	NA	NA	NA	""	"CEP112"	"ENSG00000154240.16"	"ENST00000392769.6"	14	956	98.9539749	0.120187334	0.1307	0.25774	0.26157	-5241.856728	-5241.04238	0.442928022	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	2517	839	0.32162	0.27798	0.0584	0.1817	0.14144	0.6824125	0.30824	1	0.34172	1	NA	NA	NA	""	"CEP112"	"CEP112_sequences_filtered_longestORFs_mafft_mincov_prank"	"CEP112_all"	1897	22	"0.276849866887"	"0.271"	"N"	"0.2236"	12	"192, 196, 568, 940, 943, 955, 958, 996, 1041, 1637, 1668, 1754"	"N"	"0.44609727324197324"	0	"na"	"N"	"0.05404672612720744"	0	"na"	"Y"	"0.017970926883913562"	0	""	"na"	"na"	0	"na"	"CEP112_sequences_filtered_longestORFs_mafft_prank"	"CEP112"	1043	11	"0.206157363089"	"0.194"	"N"	0.304	17	"82, 140, 172, 182, 254, 322, 364, 524, 528, 550, 578, 586, 637, 659, 701, 732, 859"	"N"	"0.9999999105748469"	0	"na"	"N"	"0.8886782377978476"	0	"na"	"N"	"0.6466177259356372"	0	"na"	"Y"	"0.003413558443400645"	0	""	""	""	"shared"
"CEP135"	"CEP135"	"CEP135"	"nsp13"	"CEP135"	"list26_COV_list4dataset2nonOrf"	"centrosomal protein 135"	"CEP4|KIAA0635|MCPH8"	"no"	24	3423	1141	0.23978	0.39423	0.0725	0.3023	0.083372	0.327532857142857	0.15305	0.484689754098361	0.22336	0.966220224719101	10.668	1.77574	3	"359_Q_0.922,485_I_0.928,599_S_0.949"	"CEP135"	"ENSMLUG00000015028.2"	"ENSMLUT00000015042.2"	8	1140	99.38596491	0.16289216	0.2985	0.64712	0.64712	-7835.689032	-7835.689038	0.999994	NA	NA	NA	""	"CEP135"	"ENSG00000174799.10"	"ENST00000257287.4"	17	1141	99.56178791	0.171373197	0.1243	0.32228	0.32336	-6728.250497	-6728.014371	0.789681168	NA	NA	NA	""	"CEP135"	0.02680381	0.468831557	""	NA	NA	NA	""	""	3054	1018	0.26589	0.30015	0.0586	0.2205	0.043436	0.3372446	0.07069	0.544313	0.13152	0.973753846153846	6.965	2.45299	4	"431_I_0.956,535_S_0.968,609_Y_0.926,673_K_0.910"	"CEP135"	"CEP135_sequences_filtered_longestORFs_mafft_mincov_prank"	"CEP135_all"	1226	24	"0.270918243847"	"0.216"	"N"	"0.6143"	19	"165, 275, 371, 399, 420, 434, 642, 744, 820, 823, 840, 842, 848, 857, 915, 1022, 1172, 1218, 1226"	"Y"	"0.01228451555764139"	1	"1226"	"Y"	"0.0011272195226491707"	1	"1226"	"Y"	"0.01240072922045062"	0	""	"Y"	"0.0014648535608086791"	1	"1226"	"CEP135_sequences_filtered_longestORFs_mafft_prank"	"CEP135"	1223	12	"0.210992798259"	"0.167"	"N"	1	3	"182, 731, 850"	"N"	"0.999998115596056"	0	"na"	"N"	"0.9839880186171744"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.5621424451973213"	0	"na"	""	""	"shared"
"CEP250"	"CEP250"	"CEP250"	"nsp13"	"CEP250"	"list26_COV_list4dataset2nonOrf"	"centrosomal protein 250"	"C-NAP1|CEP2|CNAP1"	"yes"	24	7344	2448	0.37657	0.52603	0.1174	0.3117	3.9138e-06	0.000167423666666667	1.6167e-05	0.00051869125	2.6021e-05	0.000910735	1.303	6.002	6	"700_H_0.961,985_R_0.991,1168_T_0.957,1346_R_0.956,1816_A_0.961,2144_F_0.904"	"CEP250"	"ENSMLUG00000016216.2"	"ENSMLUT00000016246.2"	9	2430	98.39506173	0.223396701	0.2874	0.94684	0.99501	-19511.34122	-19479.88355	2.18e-14	-19502.87264	1.2e-11	8	"C2329, L2325, I2327, D2328, R2073, S2332, C2333, L2127"	"CEP250"	"ENSG00000126001.15"	"ENST00000621352.1"	6	35	82.85714286	0.583356771	0.1803	0.37104	0.37247	-146.318139	-146.267744	0.950853763	NA	NA	NA	""	"CEP250"	2.38e-06	0.000511085	"centrosomal protein 250"	NA	NA	NA	""	"This gene encodes a core centrosomal protein required for centriole-centriole cohesion during interphase of the cell cycle. The encoded protein dissociates from the centrosomes when parental centrioles separate at the beginning of mitosis. "	6276	2092	0.29525	0.37015	0.0731	0.2475	0.0066588	0.0754011176470588	0.020757	0.210301184210526	0.028514	0.332663333333333	0.494	9.3193	2	"1567_A_0.958,1843_F_0.905"	"CEP250"	"CEP250_sequences_filtered_longestORFs_mafft_mincov_prank"	"CEP250_all"	4313	24	"0.355610453794"	"0.325"	"N"	"0.5565"	48	"20, 444, 523, 525, 1113, 1116, 1121, 1134, 1193, 1205, 1229, 1261, 1279, 1898, 1904, 2047, 2119, 2164, 2247, 2258, 2442, 2479, 2521, 2567, 2646, 2668, 2693, 2744, 2923, 2939, 2946, 3098, 3105, 3116, 3121, 3263, 3311, 3325, 3367, 3387, 3425, 3434, 3955, 3966, 3988, 4057, 4070, 4158"	"Y"	"0.01445230788699479"	0	""	"Y"	"6.396420329554522e-05"	1	"2247"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"CEP250_sequences_filtered_longestORFs_mafft_prank"	"CEP250"	2614	12	"0.265774763928"	"0.233"	"N"	0.9595	20	"167, 258, 327, 1085, 1115, 1411, 1426, 1684, 1754, 1936, 1958, 1977, 1982, 2198, 2268, 2331, 2347, 2459, 2490, 2520"	"N"	"0.9999971999971513"	0	"na"	"Y"	"4.593349950684148e-05"	1	"258"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	""	""	"shared"
"CEP350"	"CEP350"	"CEP350"	"nsp13"	"CEP350"	"list26_COV_list4dataset2nonOrf"	"centrosomal protein 350"	"CAP350|GM133"	"yes"	24	9372	3124	0.31075	0.43385	0.0913	0.2937	0.0057823	0.0483953369565217	0.0033197	0.0319521125	0.015818	0.13932625	1.591	3.26025	1	"1315_A_0.962"	"CEP350"	"ENSMLUG00000006005.2"	"ENSMLUT00000006017.2"	11	3123	94.01216779	0.1994026	0.3487	1.02212	1.02439	-25926.89224	-25922.08507	0.008170926	-25922.09229	0.90432485	NA	""	"CEP350"	"ENSG00000135837.15"	"ENST00000417046.1"	17	582	99.48453608	0.214925457	0.1419	0.37468	0.37468	-3640.619381	-3640.619382	0.999999	NA	NA	NA	""	"CEP350"	0.37658998	1	""	NA	NA	NA	""	""	8271	2757	0.37414	0.32907	0.0763	0.204	0.022509	0.201534069767442	0.035304	0.32362	0.076923	0.7009975	3.482	2.74731	4	"1026_Y_0.916,1078_A_0.917,1139_T_0.908,2164_S_0.920"	"CEP350"	"CEP350_sequences_filtered_longestORFs_mafft_mincov_prank"	"CEP350_all"	4005	24	"0.303284884646"	"0.290"	"N"	"0.8648"	37	"443, 461, 516, 524, 528, 555, 567, 586, 648, 795, 806, 1151, 1475, 1491, 1493, 1565, 1595, 1636, 1658, 1674, 1990, 2782, 2892, 3034, 3051, 3071, 3073, 3152, 3237, 3350, 3421, 3460, 3509, 3530, 3594, 3804, 3995"	"N"	"0.9999980207959684"	0	"na"	"Y"	"0.04735914816863298"	0	""	"N"	"0.9910403787746719"	0	"na"	"Y"	"0.02583564891214684"	0	""	"CEP350_sequences_filtered_longestORFs_mafft_prank"	"CEP350"	3352	12	"0.250105005404"	"0.222"	"N"	0.9047	34	"37, 178, 188, 266, 303, 488, 515, 544, 563, 1091, 1104, 1237, 1446, 1465, 1499, 1673, 2340, 2475, 2476, 2546, 2581, 2587, 2635, 2645, 2660, 2679, 2724, 2796, 2834, 2835, 2845, 2853, 2949, 3209"	"N"	"0.9999999911087798"	0	"na"	"N"	"0.0715503354809176"	0	"na"	"N"	"0.6804506362032015"	0	"na"	"N"	"0.05228739240356714"	0	"na"	""	""	"shared"
"CEP43"	"CEP43"	"FGFR1OP"	"nsp13"	"FGFR1OP"	"list26_COV_list4dataset2nonOrf"	"FGFR1 oncogene partner"	"FOP"	"no"	24	1200	400	0.17666	0.45373	0.0665	0.3766	1	1	1	1	1	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"FGFR1OP"	0.481654006	1	""	NA	NA	NA	""	""	981	327	0.18516	0.33883	0.054	0.2918	1	1	1	1	1	1	NA	NA	NA	""	"CEP43"	"CEP43_sequences_filtered_longestORFs_mafft_mincov_prank"	"CEP43_all"	996	22	"0.217127307406"	"0.200"	"N"	"0.2754"	6	"513, 576, 584, 607, 648, 675"	"N"	"0.89657698694594"	0	"na"	"N"	"0.12289542444020864"	0	"na"	"N"	"0.8411376148448129"	0	"na"	"Y"	"0.002350799020247638"	0	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	"onlyprimates"
"CEP68"	"CEP68"	"CEP68"	"nsp13"	"CEP68"	"list26_COV_list4dataset2nonOrf"	"centrosomal protein 68"	"KIAA0582"	"yes"	24	2277	759	0.59765	0.74742	0.2045	0.3421	1.7751e-05	0.0004881525	9.2334e-05	0.00209109352941176	8.3935e-05	0.0023082125	4.951	3.67498	5	"44_R_0.927,190_A_0.949,220_G_0.949,414_R_0.999,425_R_0.985"	"CEP68"	"ENSMLUG00000002435.2"	"ENSMLUT00000002435.2"	13	749	90.12016021	0.349914088	0.3466	1.64499	2.34495	-7894.797821	-7884.398068	3.04e-05	-7893.86228	1.36e-05	NA	""	"CEP68"	"ENSG00000011523.13"	"ENST00000537589.1"	16	295	93.89830508	0.682457269	0.1598	0.61609	0.62168	-2118.847697	-2115.780209	0.046537911	-2118.560686	0.018365404	2	"R25, R36"	"CEP68"	0.946090868	1	""	NA	NA	NA	""	""	1731	577	0.55976	0.41977	0.1124	0.2008	0.1004	0.544422535211268	0.24567	1	0.25935	1	NA	NA	NA	""	"CEP68"	"CEP68_sequences_filtered_longestORFs_mafft_mincov_prank"	"CEP68_all"	1164	24	"0.569514697739"	"0.589"	"Y"	"0.0462"	29	"35, 60, 132, 134, 143, 148, 202, 207, 249, 279, 294, 396, 429, 450, 462, 465, 476, 493, 512, 513, 585, 586, 600, 651, 659, 757, 960, 980, 985"	"Y"	"0.0007482232324301053"	0	""	"Y"	"4.7907226839875226e-05"	2	"60, 465"	"Y"	"6.013010059238225e-05"	1	"465"	"Y"	"5.66615387113456e-06"	5	"60, 132, 249, 465, 980"	"CEP68_sequences_filtered_longestORFs_mafft_prank"	"CEP68"	874	12	"0.434041323712"	"0.424"	"N"	0.9735	11	"83, 123, 155, 427, 439, 449, 462, 478, 588, 675, 686"	"N"	"0.49214635232430914"	0	"na"	"N"	"0.08503102873795458"	0	"na"	"N"	"1.0"	0	"na"	"Y"	"0.048850043989108353"	0	""	""	""	"shared"
"CHMP2A"	"CHMP2A"	"CHMP2A"	"orf9b"	"CHMP2A"	"list25_COV_list3dataset2orf"	"charged multivesicular body protein 2A"	"BC-2|BC2|CHMP2|VPS2|VPS2A"	"no"	24	669	223	0.00793	0.38776	0.004	0.5084	0.23208	0.629230985915493	0.029512	0.165459097222222	0.48971	1	0.484	3.36041	0	"noneOver_0.9"	"CHMP2A"	"ENSMLUG00000014318.2"	"ENSMLUT00000014320.2"	11	225	93.33333333	0.009865607	0.6108	51.30209	51.30799	-2251.87779	-2250.702219	0.308642694	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"CHMP2A"	0.255998936	1	""	NA	NA	NA	""	""	519	173	1e-04	0.26378	0	0.3752	0.99483	1	1	1	0.9991	1	NA	NA	NA	""	"CHMP2A"	"CHMP2A_sequences_filtered_longestORFs_mafft_mincov_prank"	"CHMP2A_all"	784	24	"0.134317039832"	"0.113"	"N"	"0.0739"	2	"614, 643"	"N"	"0.9999997898121585"	0	"na"	"N"	"0.9726719257023788"	0	"na"	"N"	"1.0"	0	"na"	"Y"	"0.0026959624879334"	0	""	"CHMP2A_sequences_filtered_longestORFs_mafft_prank"	"CHMP2A"	261	12	"0.009560764201"	"0.009"	"N"	0.573	1	"261"	"N"	"0.9999999922001734"	0	"na"	"Y"	"7.99952553215434e-05"	3	"182, 220, 221"	"N"	"1.0"	0	"na"	"Y"	"0.007828377549224703"	0	""	""	""	"shared"
"CHPF"	"CHPF"	"CHPF"	"orf8"	"CHPF"	"list23_COV_list1orf"	"chondroitin polymerizing factor"	"CHSY2|CSS2"	"no"	22	2331	777	0.05393	0.4563	0.0271	0.5028	0.85614	1	0.75958	1	0.98819	1	NA	NA	NA	""	"CHPF"	"ENSMLUG00000010340.2"	"ENSMLUT00000010332.2"	7	773	98.70633894	0.075455074	0.3363	0.7372	0.7372	-5413.519552	-5413.519654	0.999898005	NA	NA	NA	""	"CHPF"	"ENSG00000123989.13"	"ENST00000373891.2"	15	299	97.65886288	0.038916877	0.1553	0.31839	0.3229	-1631.411117	-1631.246076	0.847858941	NA	NA	NA	""	"CHPF"	1	1	""	NA	NA	NA	""	""	1518	506	0.0538	0.2465	0.0143	0.2652	1	1	1	1	0.99978	1	NA	NA	NA	""	"CHPF"	"CHPF_sequences_filtered_longestORFs_mafft_mincov_prank"	"CHPF_all"	790	24	"0.048013757058"	"0.048"	"N"	"1.0000"	1	"370"	"N"	"0.9999996829984005"	0	"na"	"Y"	"0.0004093545908648424"	3	"370, 373, 767"	"N"	"0.9970044955036704"	0	"na"	"Y"	"0.03080741103276452"	1	"373"	"CHPF_sequences_filtered_longestORFs_mafft_prank"	"CHPF"	834	12	"0.068644237063"	"0.068"	"N"	0.0561	2	"339, 649"	"N"	"0.9999994309620688"	0	"na"	"N"	"0.2000407448063027"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.9990004998331715"	0	"na"	""	""	"shared"
"CHPF2"	"CHPF2"	"CHPF2"	"orf8"	"CHPF2"	"list25_COV_list3dataset2orf"	"chondroitin polymerizing factor 2"	"CSGLCA-T|CSGlcAT|ChSy-3|chPF-2"	"no"	21	2319	773	0.10299	0.3802	0.0347	0.337	1	1	0.96492	1	1	1	NA	NA	NA	""	"CHPF2"	"ENSMLUG00000003546.2"	"ENSMLUT00000003546.2"	11	775	96.51612903	0.057756561	0.363	1.03035	1.03035	-6033.059791	-6033.060055	0.999736035	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"CHPF2"	0.998871621	1	""	NA	NA	NA	""	""	1758	586	0.08267	0.22172	0.0174	0.2103	0.91855	1	0.99004	1	0.99466	1	NA	NA	NA	""	"CHPF2"	"CHPF2_sequences_filtered_longestORFs_mafft_mincov_prank"	"CHPF2_all"	824	22	"0.091580003619"	"0.083"	"N"	"0.9114"	1	"683"	"N"	"0.9999999813981051"	0	"na"	"Y"	"0.015369463566035994"	5	"82, 319, 380, 526, 683"	"N"	"0.9930244429336252"	0	"na"	"N"	"0.3723205880533881"	0	"na"	"CHPF2_sequences_filtered_longestORFs_mafft_prank"	"CHPF2"	795	12	"0.033912593302"	"0.038"	"N"	0.9975	1	"504"	"N"	"0.9999999998071871"	0	"na"	"Y"	"0.0013738401598242546"	2	"67, 510"	"N"	"1.0"	0	"na"	"N"	"0.9743350896089052"	0	"na"	""	""	"shared"
"CISD3"	"CISD3"	"CISD3"	"orf8"	"CISD3"	"list25_COV_list3dataset2orf"	"CDGSH iron sulfur domain 3"	"MiNT|Miner2"	"no"	23	384	128	0.16332	0.56734	0.0939	0.5748	1	1	0.87087	1	0.94745	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	279	93	0.04635	0.22112	0.0141	0.3044	1	1	1	1	1	1	NA	NA	NA	""	"CISD3"	"CISD3_sequences_filtered_longestORFs_mafft_mincov_prank"	"CISD3_all"	755	22	"0.246814179431"	"0.269"	"Y"	"0.0000"	2	"240, 304"	"N"	"0.99999994431778"	0	"na"	"N"	"0.7283308007321679"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.7780223715587988"	0	"na"	"CISD3_sequences_filtered_longestORFs_mafft_prank"	"CISD3"	338	9	"0.291778267628"	"0.261"	"Y"	0.0357	1	"229"	"Y"	"0.010300146355136456"	1	"188"	"Y"	"0.0006314778513951671"	4	"188, 200, 229, 303"	"N"	"0.05619092567371273"	0	"na"	"Y"	"0.011254356284444886"	2	"188, 303"	""	""	"shared"
"CIT"	"CIT"	"CIT"	"nsp13"	"CIT"	"list26_COV_list4dataset2nonOrf"	"citron rho-interacting serine/threonine kinase"	"CITK|CRIK|MCPH17|STK21"	"no"	24	6210	2070	0.03889	0.33654	0.014	0.3603	0.99887	1	0.10317	0.374721226415094	1	1	NA	NA	NA	""	"CIT"	"ENSMLUG00000015398.2"	"ENSMLUT00000015418.2"	9	2053	99.75645397	0.049639278	0.2704	0.58266	0.58355	-13769.99377	-13769.98439	0.990667818	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"CIT"	0.981289664	1	""	NA	NA	NA	""	""	4941	1647	0.05523	0.16649	0.0092	0.1672	0.28546	1	0.23839	1	0.56482	1	NA	NA	NA	""	"CIT"	"CIT_sequences_filtered_longestORFs_mafft_mincov_prank"	"CIT_all"	2945	24	"0.037646555111"	"0.036"	"N"	"1.0000"	5	"270, 374, 457, 586, 2759"	"N"	"0.9999999319788936"	0	"na"	"Y"	"3.303048206279468e-12"	7	"218, 270, 372, 374, 423, 764, 2638"	"N"	"0.9980019986669264"	0	"na"	"Y"	"0.0014031999106819035"	1	"374"	"CIT_sequences_filtered_longestORFs_mafft_prank"	"CIT"	2350	11	"0.049451453316"	"0.047"	"N"	1	2	"186, 2101"	"N"	"0.9999992900523258"	0	"na"	"Y"	"3.4137129040957628e-09"	7	"40, 48, 78, 84, 186, 399, 2331"	"N"	"1.0"	0	"na"	"N"	"0.33021873855483563"	0	"na"	""	""	"shared"
"CLCC1"	"CLCC1"	"CLCC1"	"orf3a"	"CLCC1"	"list23_COV_list1orf"	"chloride channel CLIC like 1"	"MCLC"	"no"	24	1662	554	0.37305	0.58272	0.1318	0.3532	0.18203	0.556202777777778	0.3418	0.804883333333333	0.41159	1	NA	NA	NA	""	"CLCC1"	"ENSMLUG00000010565.2"	"ENSMLUT00000010579.2"	10	551	80.21778584	0.223061198	0.5464	1.66053	1.66452	-4798.81463	-4798.355971	0.632130765	NA	NA	NA	""	"CLCC1"	"ENSG00000121940.15"	"ENST00000356970.6"	17	552	90.94202899	0.245120934	0.1799	0.48976	0.49191	-3497.202062	-3496.537675	0.514588874	NA	NA	NA	""	"CLCC1"	0.533670304	1	""	NA	NA	NA	""	""	1359	453	0.37748	0.37499	0.0864	0.2288	0.26949	1	0.49425	1	0.5431	1	NA	NA	NA	""	"CLCC1"	"CLCC1_sequences_filtered_longestORFs_mafft_mincov_prank"	"CLCC1_all"	1003	23	"0.387140057280"	"0.358"	"N"	"1.0000"	0	"na"	"N"	"0.9969528688945792"	0	"na"	"N"	"0.1975430987785456"	0	"na"	"N"	"0.3017972031261467"	0	"na"	"Y"	"0.039281563198178604"	0	""	"CLCC1_sequences_filtered_longestORFs_mafft_prank"	"CLCC1"	878	12	"0.389987775037"	"0.369"	"N"	0.061	20	"304, 314, 415, 469, 513, 553, 568, 580, 616, 641, 681, 683, 697, 707, 717, 737, 742, 765, 792, 794"	"N"	"0.9999986477751056"	0	"na"	"N"	"0.7941510288300495"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.696978998466325"	0	"na"	""	""	"shared"
"CLIP4"	"CLIP4"	"CLIP4"	"nsp13"	"CLIP4"	"list26_COV_list4dataset2nonOrf"	"CAP-Gly domain containing linker protein family member 4"	"RSNL2"	"no"	24	2118	706	0.09451	0.43	0.0397	0.4196	0.16867	0.5227068	0.13376	0.440150427350427	0.47151	1	NA	NA	NA	""	"CLIP4"	"ENSMLUG00000010758.2"	"ENSMLUT00000010784.2"	10	703	91.89189189	0.097768764	0.7931	1.28069	1.28272	-5809.284419	-5808.85544	0.651173604	NA	NA	NA	""	"CLIP4"	"ENSG00000115295.19"	"ENST00000438819.1"	18	93	95.69892473	0.049852989	0.1251	0.21689	0.21685	-452.01225	-451.992607	0.980548667	NA	NA	NA	""	"CLIP4"	0.219143969	1	""	NA	NA	NA	""	""	1710	570	0.10121	0.24545	0.0254	0.2506	0.5335	1	0.54715	1	0.82901	1	NA	NA	NA	""	"CLIP4"	"CLIP4_sequences_filtered_longestORFs_mafft_mincov_prank"	"CLIP4_all"	1304	24	"0.117031084297"	"0.103"	"Y"	"0.0025"	7	"113, 298, 347, 379, 446, 501, 827"	"N"	"0.9999989817802725"	0	"na"	"Y"	"0.028418180164528135"	1	"386"	"Y"	"0.004927123153974509"	0	""	"Y"	"0.040477864898334465"	0	""	"CLIP4_sequences_filtered_longestORFs_mafft_prank"	"CLIP4"	806	12	"0.124211676557"	"0.124"	"Y"	0	6	"443, 470, 645, 646, 665, 683"	"N"	"0.9999993504600133"	0	"na"	"Y"	"0.0161088496734443"	4	"222, 359, 541, 661"	"N"	"0.9930244429327221"	0	"na"	"N"	"1.0"	0	"na"	""	""	"shared"
"CNTRL"	"CNTRL"	"CNTRL"	"nsp13"	"CNTRL"	"list26_COV_list4dataset2nonOrf"	"centriolin"	"CEP1|CEP110|FAN|bA165P4.1"	"yes"	24	6981	2327	0.40767	0.39419	0.092	0.2258	1.7117e-06	9.41435e-05	9.3186e-06	0.000398629	1.0608e-05	0.00051051	0.933	7.94398	8	"437_T_0.993,510_Q_0.935,853_R_0.978,1300_P_0.910,1376_C_0.975,1725_S_0.981,2217_F_0.912,2323_A_0.917"	"CNTRL"	"ENSMLUG00000009719.2"	"ENSMLUT00000009796.2"	10	2333	96.78525504	0.179657066	0.2905	0.74087	0.74929	-17641.08711	-17631.26535	5.43e-05	-17636.52747	0.001178187	1	"K252"	"CNTRL"	"ENSG00000119397.16"	"ENST00000613863.4"	18	483	96.6873706	0.203384647	0.1481	0.36514	0.36908	-2911.518698	-2910.971378	0.57849811	NA	NA	NA	""	"CNTRL"	1.66e-08	6.99e-06	"centriolin"	NA	NA	NA	""	"This gene encodes a centrosomal protein required for the centrosome to function as a microtubule organizing center. The gene product is also associated with centrosome maturation. "	6198	2066	0.39801	0.29068	0.0677	0.1701	0.046776	0.339787924528302	0.11823	0.734170161290323	0.12713	0.963556862745098	0.077	19.53224	1	"1536_S_0.939"	"CNTRL"	"CNTRL_sequences_filtered_longestORFs_mafft_mincov_prank"	"CNTRL_all"	5380	24	"0.358903199166"	"0.357"	"Y"	"0.0000"	44	"106, 113, 138, 161, 175, 236, 266, 280, 330, 344, 345, 517, 523, 527, 618, 647, 751, 893, 918, 922, 949, 1090, 1154, 1200, 1292, 1339, 1402, 1435, 1460, 1537, 1566, 1643, 2629, 3606, 3616, 3749, 4431, 4451, 4497, 4577, 4784, 5312, 5314, 5321"	"Y"	"0.002142941149050039"	1	"527"	"Y"	"0.00016584455688879604"	1	"527"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"CNTRL_sequences_filtered_longestORFs_mafft_prank"	"CNTRL"	2478	12	"0.288172821262"	"0.301"	"N"	0.9992	18	"241, 274, 306, 416, 1064, 1329, 1335, 1439, 1441, 1907, 1991, 2000, 2055, 2067, 2081, 2146, 2426, 2429"	"N"	"0.9999975140121001"	0	"na"	"N"	"0.3576515461196588"	0	"na"	"N"	"0.2996919995138132"	0	"na"	"Y"	"0.036406789391123975"	0	""	""	""	"shared"
"COL6A1"	"COL6A1"	"COL6A1"	"orf8"	"COL6A1"	"list25_COV_list3dataset2orf"	"collagen type VI alpha 1 chain"	"BTHLM1|OPLL|UCHMD1"	"no"	23	3087	1029	0.04809	0.87953	0.0553	1.1505	1	1	1	1	1	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"COL6A1"	"ENSG00000142156.14"	"ENST00000612273.1"	13	1027	92.69717624	0.146502902	0.3357	0.82367	0.82367	-7083.510661	-7083.510716	0.999945002	NA	NA	NA	""	"COL6A1"	0.53045283	1	""	NA	NA	NA	""	""	1683	561	0.05345	0.28467	0.0221	0.4128	1	1	1	1	1	1	NA	NA	NA	""	"COL6A1"	"COL6A1_sequences_filtered_longestORFs_mafft_mincov_prank"	"COL6A1_all"	1482	22	"0.084215349534"	"0.056"	"N"	"0.1077"	16	"154, 269, 376, 406, 657, 723, 789, 894, 1022, 1025, 1123, 1124, 1183, 1215, 1244, 1348"	"N"	"0.9999994799910825"	0	"na"	"Y"	"1.951983742015941e-06"	8	"156, 177, 255, 266, 767, 925, 1208, 1281"	"N"	"1.0"	0	"na"	"Y"	"0.0011238443676984354"	0	""	"COL6A1_bat_cut_hipArm_mafft_prank"	"COL6A1"	1078	9	"0.0828000843295001"	"0.077"	"Y"	0.0023	46	"15, 26, 99, 115, 180, 184, 202, 221, 226, 227, 283, 306, 337, 375, 387, 390, 399, 472, 603, 632, 678, 685, 725, 726, 738, 740, 761, 768, 770, 808, 834, 856, 895, 902, 911, 916, 919, 920, 956, 958, 967, 985, 996, 1009, 1060, 1078"	"N"	"0.999999659492518"	0	"na"	"Y"	"1.4694972038785e-06"	8	"64, 108, 227, 364, 387, 472, 727, 986"	"N"	"0.13931746906383644"	0	"na"	"Y"	"0.017650344100739557"	1	"472"	""	""	"shared"
"COLGALT1"	"COLGALT1"	"COLGALT1"	"nsp1"	"COLGALT1"	"list26_COV_list4dataset2nonOrf"	"collagen beta(1-O)galactosyltransferase 1"	"ColGalT 1|GLT25D1"	"no"	24	1869	623	0.04239	0.70448	0.0442	1.0436	0.14548	0.478716239316239	0.017881	0.116681101694915	1	1	0.753	2.62207	1	"547_H_0.957"	"COLGALT1"	"ENSMLUG00000004442.2"	"ENSMLUT00000004449.2"	5	629	97.13831479	0.076213473	0.3899	0.71621	0.71708	-3712.931218	-3712.921308	0.990138942	NA	NA	NA	""	"COLGALT1"	"ENSG00000130309.10"	"ENST00000597147.1"	17	217	100	0.024196018	0.3142	0.62531	0.62533	-1376.826978	-1376.827961	0.999017483	NA	NA	NA	""	"COLGALT1"	1	1	""	NA	NA	NA	""	""	1119	373	0.04579	0.38495	0.0277	0.6059	0.18517	0.848695833333333	0.30292	1	0.40115	1	NA	NA	NA	""	"COLGALT1"	"COLGALT1_sequences_filtered_longestORFs_D262gp2_prank"	"COLGALT1_262-2"	670	22	"0.064528425433"	"0.044"	"Y"	"0.0020"	4	"22, 102, 147, 243"	"N"	"0.9999997906106947"	0	"na"	"N"	"0.1087993010801923"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.1056102339500828"	0	"na"	"COLGALT1_sequences_filtered_longestORFs_D118gp2_prank"	"COLGALT1_118-2"	1047	11	"0.050042692102"	"0.048"	"N"	0.2522	3	"185, 433, 577"	"N"	"0.9999992417409121"	0	"na"	"Y"	"0.009699158343525069"	1	"433"	"N"	"1.0"	0	"na"	"Y"	"0.0348047989794767"	1	"433"	""	""	"shared"
"COMT"	"COMT"	"COMT"	"nsp7"	"COMT"	"list26_COV_list4dataset2nonOrf"	"catechol-O-methyltransferase"	"HEL-S-98n"	"no"	24	819	273	0.18931	1.04616	0.1861	0.9829	0.83136	1	0.5052	1	1	1	NA	NA	NA	""	"COMT"	"ENSMLUG00000009290.2"	"ENSMLUT00000009278.2"	12	269	76.57992565	0.238498277	0.5648	2.23819	2.36405	-2574.274077	-2564.587824	6.21e-05	-2570.040918	0.000958436	2	"L163, L31"	"COMT"	"ENSG00000093010.13"	"ENST00000428707.1"	14	152	89.47368421	0.318784335	0.1652	0.7361	0.75512	-1091.441756	-1088.752312	0.067918692	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	495	165	0.20246	0.49391	0.0907	0.4478	0.72222	1	0.80254	1	0.94991	1	NA	NA	NA	""	"COMT"	"COMT_sequences_filtered_longestORFs_mafft_mincov_prank"	"COMT_all"	1143	24	"na"	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"COMT_sequences_filtered_longestORFs_mafft_prank"	"COMT"	278	10	"0.262458910316"	"0.204"	"N"	0.2706	12	"17, 19, 30, 38, 56, 80, 84, 101, 105, 157, 177, 254"	"N"	"0.348130857960201"	0	"na"	"Y"	"0.009534298992273106"	6	"38, 39, 41, 44, 230, 260"	"N"	"0.05807616153052819"	0	"na"	"Y"	"0.0002404496129336441"	0	""	""	""	"shared"
"COQ8B"	"COQ8B"	"ADCK4"	"M"	"ADCK4"	"list26_COV_list4dataset2nonOrf"	"coenzyme Q8B"	"ADCK4|NPHS9"	"no"	24	1641	547	0.18011	0.65301	0.1015	0.5636	0.20476	0.577443795620438	0.3057	0.754451923076923	0.65529	1	NA	NA	NA	""	"COQ8B"	"ENSMLUG00000000210.2"	"ENSMLUT00000000210.2"	11	533	99.43714822	0.15920295	0.3561	1.15164	1.16695	-4815.306353	-4812.452234	0.05760655	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	1197	399	0.2012	0.4348	0.0751	0.3734	1	1	1	1	1	1	NA	NA	NA	""	"COQ8B"	"COQ8B_sequences_filtered_longestORFs_mafft_mincov_prank_part1_prank"	"COQ8B_all_part1"	1585	24	"0.193911276721"	"0.162"	"N"	"0.9848"	8	"843, 962, 967, 1060, 1315, 1454, 1566, 1580"	"N"	"0.9999993627090801"	0	"na"	"N"	"0.3524974012052818"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.18749558134692915"	0	"na"	"COQ8B_bat_select-2_mafft_prank"	"COQ8B"	549	11	"0.182497195488553"	"0.152"	"N"	0.8349	3	"20, 56, 542"	"N"	"0.999999084497595"	0	"na"	"N"	"0.254394310720918"	0	"na"	"N"	"1.0"	0	"na"	"Y"	"0.041794104084912305"	0	""	""	""	"shared"
"CRTC3"	"CRTC3"	"CRTC3"	"nsp12"	"CRTC3"	"list24_COV_list2nonOrf"	"CREB regulated transcription coactivator 3"	"TORC-3|TORC3"	"no"	24	1860	620	0.15898	0.49654	0.0622	0.3913	1	1	1	1	1	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"CRTC3"	"ENSG00000140577.15"	"ENST00000558005.1"	15	189	100	0.175393258	0.1453	0.37919	0.42036	-1190.280278	-1172.866651	2.74e-08	-1189.827595	5.74e-09	NA	""	"CRTC3"	0.076771389	0.831146916	""	NA	NA	NA	""	""	1419	473	0.16941	0.2975	0.0408	0.241	1	1	1	1	1	1	NA	NA	NA	""	"CRTC3"	"CRTC3_sequences_filtered_longestORFs_mafft_mincov_prank"	"CRTC3_all"	1009	23	"0.136194814144"	"0.157"	"Y"	"0.0214"	12	"45, 46, 47, 177, 281, 694, 717, 785, 797, 835, 868, 897"	"N"	"0.14908779103504977"	0	"na"	"Y"	"0.0016285455675104437"	2	"45, 47"	"N"	"0.8529963589694294"	0	"na"	"N"	"0.18562996914102153"	0	"na"	"CRTC3_sequences_filtered_longestORFs_mafft_prank"	"CRTC3"	851	12	"0.171790887080"	"0.173"	"N"	0.644	4	"487, 516, 639, 668"	"N"	"0.9999996535689806"	0	"na"	"N"	"0.2901238301948251"	0	"na"	"N"	"1.0"	0	"na"	"Y"	"0.00039092297979666685"	0	""	""	""	"shared"
"CSDE1"	"CSDE1"	"CSDE1"	"orf9b"	"CSDE1"	"list25_COV_list3dataset2orf"	"cold shock domain containing E1"	"D1S155E|UNR"	"no"	22	2535	845	0.03244	0.18065	0.0066	0.2039	0.99342	1	0.97742	1	1	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"CSDE1"	1	1	""	NA	NA	NA	""	""	2220	740	0.03113	0.12333	0.0044	0.141	1	1	1	1	0.99985	1	NA	NA	NA	""	"CSDE1"	"CSDE1_sequences_filtered_longestORFs_mafft_mincov_prank"	"CSDE1_all"	1421	24	"0.113593693126"	"0.122"	"Y"	"0.0000"	2	"172, 173"	"N"	"0.9999995787275998"	0	"na"	"N"	"0.9984935954836791"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.7254232509902045"	0	"na"	"CSDE1_sequences_filtered_longestORFs_mafft_prank"	"CSDE1"	1159	12	"0.081507673532"	"0.100"	"N"	1	1	"749"	"N"	"0.9999975757384445"	0	"na"	"N"	"0.9996612418895992"	0	"na"	"N"	"1.0"	0	"na"	"N"	"1.0"	0	"na"	""	""	"shared"
"CSNK2A2"	"CSNK2A2"	"CSNK2A2"	"N"	"CSNK2A2"	"list26_COV_list4dataset2nonOrf"	"casein kinase 2 alpha 2"	"CK2A2|CK2alpha'|CSNK2A1"	"no"	24	1053	351	0.01752	0.19671	0.004	0.2297	1	1	1	1	1	1	NA	NA	NA	""	"CSNK2A2"	"ENSMLUG00000000283.2"	"ENSMLUT00000000282.2"	6	282	93.26241135	NA	0.1352	50.09872	50.09883	-1796.781788	-1796.784621	0.997171009	NA	NA	NA	""	"CSNK2A2"	"ENSG00000070770.8"	"ENST00000565188.1"	10	135	85.92592593	0.180818547	0.0661	0.05104	0.05104	-491.876359	-491.87636	0.999999	NA	NA	NA	""	"CSNK2A2"	0.998404232	1	""	NA	NA	NA	""	""	888	296	0.03261	0.11613	0.0047	0.1428	1	1	1	1	0.99997	1	NA	NA	NA	""	"CSNK2A2"	"CSNK2A2_sequences_filtered_longestORFs_mafft_mincov_prank_part2_prank"	"CSNK2A2_all_part2"	571	24	"0.035420376077"	"0.034"	"N"	"1.0000"	0	"na"	"N"	"0.9999939666734114"	0	"na"	"N"	"0.4276588948283805"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.7834876342627513"	0	"na"	"CSNK2A2_sequences_filtered_longestORFs_D138gp1_prank"	"CSNK2A2_138-1"	477	12	"0.004084415411"	"0.010"	"N"	0.7806	1	"121"	"N"	"0.9999999842543731"	0	"na"	"N"	"0.9999996824056374"	0	"na"	"N"	"0.326606237611907"	0	"na"	"N"	"0.3091279531286871"	0	"na"	""	""	"shared"
"CSNK2B"	"CSNK2B"	"CSNK2B"	"N"	"CSNK2B"	"list26_COV_list4dataset2nonOrf"	"casein kinase 2 beta"	"CK2B|CK2N|CSK2B|Ckb1|Ckb2|G5A"	"no"	23	648	216	0.06127	0.27347	0.0173	0.2817	1	1	1	1	1	1	NA	NA	NA	""	"CSNK2B"	"ENSMLUG00000009414.2"	"ENSMLUT00000009411.2"	13	236	86.86440678	0.004570907	0.3122	0.61783	0.6146	-1327.632217	-1327.37153	0.770522055	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"CSNK2B"	1	1	""	NA	NA	NA	""	""	537	179	0.02126	0.18748	0.005	0.2342	1	1	1	1	0.99975	1	NA	NA	NA	""	"CSNK2B"	"CSNK2B_sequences_filtered_longestORFs_mafft_mincov_prank"	"CSNK2B_all"	856	23	"0.237889117100"	"0.251"	"Y"	"0.0017"	9	"138, 139, 143, 148, 178, 189, 318, 411, 630"	"N"	"0.9999992911891934"	0	"na"	"N"	"0.999874632721648"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.33722665767603527"	0	"na"	"CSNK2B_sequences_filtered_longestORFs_mafft_prank"	"CSNK2B"	215	12	"0.008287837199"	"0.008"	"N"	0.3807	1	"156"	"N"	"0.9999997733666789"	0	"na"	"N"	"0.11432013524455374"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.5299354883175731"	0	"na"	""	""	"shared"
"CUL2"	"CUL2"	"CUL2"	"orf10"	"CUL2"	"list25_COV_list3dataset2orf"	"cullin 2"	"-"	"no"	19	2295	765	0.0304	0.23	0.0077	0.2534	0.76743	1	0.31529	0.773163375796178	0.81961	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	2064	688	0.03811	0.14669	0.0063	0.166	1	1	1	1	0.99983	1	NA	NA	NA	""	"CUL2"	"CUL2_sequences_filtered_longestORFs_mafft_mincov_prank"	"CUL2_all"	1261	23	"0.039776471005"	"0.041"	"N"	"1.0000"	1	"623"	"N"	"0.999999793381015"	0	"na"	"N"	"0.5432168616840068"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.7505117288368713"	0	"na"	"CUL2_sequences_filtered_longestORFs_mafft_prank"	"CUL2"	938	12	"0.141297909367"	"0.141"	"Y"	0	5	"20, 312, 593, 596, 731"	"N"	"0.7603218916019506"	0	"na"	"N"	"0.2598620587061319"	0	"na"	"N"	"0.18159070464507368"	0	"na"	"Y"	"0.0365161737537258"	0	""	""	""	"shared"
"CWC27"	"CWC27"	"CWC27"	"E"	"CWC27"	"list26_COV_list4dataset2nonOrf"	"CWC27 spliceosome associated protein homolog"	"NY-CO-10|RPSKA|SDCCAG-10|SDCCAG10"	"no"	22	1422	474	0.14589	0.321	0.0455	0.3121	0.55657	1	0.60269	1	0.84731	1	NA	NA	NA	""	"CWC27"	"ENSMLUG00000003562.2"	"ENSMLUT00000003564.2"	4	313	94.88817891	0.096007456	0.3081	0.38211	0.38211	-1632.491527	-1632.491553	0.999974	NA	NA	NA	""	"CWC27"	"ENSG00000153015.15"	"ENST00000508024.1"	6	382	97.90575916	0.223945479	0.0634	0.11018	0.12637	-1747.965293	-1745.841439	0.119569917	NA	NA	NA	""	"CWC27"	1	1	""	NA	NA	NA	""	""	1227	409	0.21492	0.20943	0.0378	0.1759	1	1	1	1	1	1	NA	NA	NA	""	"CWC27"	"CWC27_sequences_filtered_longestORFs_mafft_mincov_prank"	"CWC27_all"	1544	24	"0.206760740444"	"0.148"	"Y"	"0.0000"	2	"342, 358"	"N"	"0.9999970780524506"	0	"na"	"N"	"0.7563770914404656"	0	"na"	"N"	"1.0"	0	"na"	"Y"	"3.8561942208303546e-08"	0	""	"CWC27_sequences_filtered_longestORFs_mafft_prank"	"CWC27"	683	12	"0.209726861041"	"0.168"	"Y"	0	5	"6, 198, 202, 462, 505"	"N"	"0.895550115475682"	0	"na"	"N"	"0.11908864171121111"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.4033300780669753"	0	"na"	""	""	"shared"
"CYB5B"	"CYB5B"	"CYB5B"	"nsp7"	"CYB5B"	"list26_COV_list4dataset2nonOrf"	"cytochrome b5 type B"	"CYB5-M|CYPB5M|OMB5"	"no"	24	453	151	0.22144	0.36415	0.0587	0.2649	0.55997	1	0.65223	1	0.84198	1	NA	NA	NA	""	"CYB5B"	"ENSMLUG00000006608.2"	"ENSMLUT00000006598.2"	4	148	78.37837838	0.557940745	0.3324	0.9831	1.15315	-783.618443	-781.550673	0.12646749	NA	NA	NA	""	"CYB5B"	"ENSG00000103018.16"	"ENST00000307892.12"	4	151	98.01324503	0.12987815	0.1274	0.16408	0.16408	-724.577464	-724.577492	0.999972	NA	NA	NA	""	"CYB5B"	0.685166434	1	""	NA	NA	NA	""	""	351	117	0.3512	0.22811	0.0476	0.1355	1	1	1	1	0.99999	1	NA	NA	NA	""	"CYB5B"	"CYB5B_sequences_filtered_longestORFs_mafft_mincov_prank"	"CYB5B_all"	781	24	"0.159080696060"	"0.226"	"N"	"1.0000"	2	"550, 584"	"N"	"0.9999998873261183"	0	"na"	"N"	"0.55325096211161"	0	"na"	"N"	"0.9521811296985256"	0	"na"	"N"	"0.1308112283486016"	0	"na"	"CYB5B_bat_select-2_mafft_prank"	"CYB5B"	278	12	"0.260498620632551"	"0.265"	"Y"	0	4	"34, 116, 117, 179"	"N"	"0.99999976905522"	0	"na"	"N"	"0.998788983193515"	0	"na"	"N"	"0.9831436846348578"	0	"na"	"N"	"0.6187833918061296"	0	"na"	""	""	"shared"
"CYB5R3"	"CYB5R3"	"CYB5R3"	"nsp7"	"CYB5R3"	"list24_COV_list2nonOrf"	"cytochrome b5 reductase 3"	"B5R|DIA1"	"no"	24	1005	335	0.07081	0.65259	0.0578	0.8156	0.80021	1	0.44949	0.961245027624309	0.97702	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"CYB5R3"	"ENSG00000100243.20"	"ENST00000361740.8"	10	335	77.91044776	0.129886326	0.2462	0.47319	0.47859	-1581.374141	-1581.50339	0.878755128	NA	NA	NA	""	"CYB5R3"	1	1	""	NA	NA	NA	""	""	687	229	0.06525	0.32689	0.0299	0.4578	0.30143	1	0.46291	1	0.57986	1	NA	NA	NA	""	"CYB5R3"	"CYB5R3_sequences_filtered_longestORFs_mafft_mincov_prank_part1_prank"	"CYB5R3_all_part1"	840	24	"0.068506739915"	"0.063"	"N"	"0.4163"	3	"71, 218, 355"	"N"	"0.9999995824569813"	0	"na"	"N"	"0.999926572504325"	0	"na"	"N"	"1.0"	0	"na"	"N"	"1.0"	0	"na"	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	"onlyprimates"
"DCAF7"	"DCAF7"	"DCAF7"	"nsp9"	"DCAF7"	"list24_COV_list2nonOrf"	"DDB1 and CUL4 associated factor 7"	"AN11|HAN11|SWAN-1|WDR68"	"no"	24	1029	343	1e-04	0.23939	0	0.3147	0.99056	1	1	1	0.99836	1	NA	NA	NA	""	"DCAF7"	"ENSMLUG00000012623.2"	"ENSMLUT00000012630.2"	12	344	98.25581395	0.006208383	0.2911	0.5473	0.5473	-2206.816373	-2206.818012	0.998362342	NA	NA	NA	""	"DCAF7"	"ENSG00000136485.14"	"ENST00000615512.1"	18	206	100	0.0297002	0.1034	0.20993	0.20994	-1098.377869	-1098.378045	0.999824015	NA	NA	NA	""	"DCAF7"	0.992953366	1	""	NA	NA	NA	""	""	819	273	1e-04	0.09041	0	0.1256	1	1	1	1	0.99935	1	NA	NA	NA	""	"DCAF7"	"DCAF7_sequences_filtered_longestORFs_mafft_mincov_prank"	"DCAF7_all"	419	22	"0.016008388641"	"0.015"	"Y"	"0.0355"	0	"na"	"N"	"0.99999989632534"	0	"na"	"N"	"0.4003587295913235"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.8065414401772095"	0	"na"	"DCAF7_sequences_filtered_longestORFs_mafft_prank"	"DCAF7"	342	12	"0.001000000000"	"0.000"	"N"	1	0	"na"	"N"	"0.9999999999990905"	0	"na"	"N"	"0.9999336115303021"	0	"na"	"N"	"0.997004495503217"	0	"na"	"N"	"0.9980019986673803"	0	"na"	""	""	"shared"
"DCAKD"	"DCAKD"	"DCAKD"	"nsp7"	"DCAKD"	"list26_COV_list4dataset2nonOrf"	"dephospho-CoA kinase domain containing"	"-"	"no"	24	696	232	0.0853	0.57967	0.058	0.6794	1	1	0.82369	1	1	1	NA	NA	NA	""	"DCAKD"	"ENSMLUG00000012210.2"	"ENSMLUT00000012210.2"	14	134	100	0.018187335	0.456	1.09575	1.09582	-1090.412227	-1090.413531	0.99869685	NA	NA	NA	""	"DCAKD"	"ENSG00000172992.11"	"ENST00000310604.8"	17	232	93.53448276	0.123103624	0.2779	0.71979	0.72647	-1647.951202	-1647.856512	0.909654884	NA	NA	NA	""	"DCAKD"	0.97028099	1	""	NA	NA	NA	""	""	453	151	0.04095	0.2582	0.0127	0.3103	1	1	1	1	0.99978	1	NA	NA	NA	""	"DCAKD"	"DCAKD_sequences_filtered_longestORFs_mafft_mincov_prank"	"DCAKD_all"	492	24	"0.079209485979"	"0.072"	"N"	"1.0000"	1	"261"	"N"	"0.9999997815157496"	0	"na"	"N"	"0.9999999682427193"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.9990004998336257"	0	"na"	"DCAKD_sequences_filtered_longestORFs_mafft_prank"	"DCAKD"	231	12	"0.028667437882"	"0.033"	"N"	0.9911	4	"18, 43, 184, 220"	"N"	"0.9968479269499217"	0	"na"	"N"	"0.991360020023065"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.9990004998333987"	0	"na"	""	""	"shared"
"DCTPP1"	"DCTPP1"	"DCTPP1"	"orf9b"	"DCTPP1"	"list25_COV_list3dataset2orf"	"dCTP pyrophosphatase 1"	"CDA03|RS21C6|XTP3TPA"	"no"	23	513	171	0.29992	0.6262	0.1241	0.4138	0.014497	0.0962300862068965	0.043183	0.205252530864198	0.059901	0.397618706896552	1.589	6.25376	2	"13_G_0.991,90_A_0.903"	"DCTPP1"	"ENSMLUG00000013774.2"	"ENSMLUT00000013776.2"	13	171	88.88888889	0.228516312	0.5182	1.54428	1.5644	-1611.591443	-1610.897723	0.499713672	NA	NA	NA	""	"DCTPP1"	"ENSG00000179958.8"	"ENST00000565758.1"	18	50	94	0.365164472	0.23	0.61043	0.87126	-347.668296	-346.081898	0.204661476	NA	NA	NA	""	"DCTPP1"	0.936916944	1	""	NA	NA	NA	""	""	351	117	0.36562	0.39354	0.0871	0.2383	0.29593	1	0.57449	1	0.57993	1	NA	NA	NA	""	"DCTPP1"	"DCTPP1_sequences_filtered_longestORFs_mafft_mincov_prank"	"DCTPP1_all"	183	24	"0.346244286573"	"0.339"	"N"	"1.0000"	3	"26, 103, 169"	"N"	"0.9808463497524612"	0	"na"	"N"	"0.5723036326699686"	0	"na"	"N"	"0.8684893116976016"	0	"na"	"N"	"0.35915544132944505"	0	"na"	"DCTPP1_sequences_filtered_longestORFs_mafft_prank"	"DCTPP1"	223	11	"0.339909966211"	"0.352"	"N"	0.165	2	"29, 203"	"N"	"0.6382508675013827"	0	"na"	"N"	"0.1151718582244259"	0	"na"	"N"	"0.15381572253341838"	0	"na"	"N"	"0.07043957703401349"	0	"na"	""	""	"shared"
"DDX10"	"DDX10"	"DDX10"	"nsp8"	"DDX10"	"list24_COV_list2nonOrf"	"DEAD-box helicase 10"	"Dbp4|HRH-J8"	"no"	24	2664	888	0.20192	0.51551	0.0826	0.409	0.87746	1	0.98818	1	1	1	NA	NA	NA	""	"DDX10"	"ENSMLUG00000001645.2"	"ENSMLUT00000001650.2"	7	668	93.41317365	0.151130157	0.2951	0.74067	0.74294	-4657.636879	-4656.832291	0.447272165	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"DDX10"	1	1	""	NA	NA	NA	""	""	2199	733	0.23126	0.37751	0.0655	0.2831	0.91769	1	1	1	1	1	NA	NA	NA	""	"DDX10"	"DDX10_sequences_filtered_longestORFs_mafft_mincov_prank"	"DDX10_all"	1253	23	"0.229039735865"	"0.207"	"N"	"0.1465"	10	"484, 727, 843, 936, 947, 1014, 1021, 1184, 1195, 1234"	"N"	"0.9999981429081308"	0	"na"	"N"	"0.9995854832899672"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.9093729344671728"	0	"na"	"DDX10_sequences_filtered_longestORFs_mafft_prank"	"DDX10"	1096	12	"0.210209519346"	"0.203"	"N"	0.3441	7	"62, 352, 553, 646, 739, 935, 964"	"N"	"0.762189614507708"	0	"na"	"Y"	"0.001957649235397384"	28	"15, 20, 149, 532, 577, 579, 582, 585, 602, 615, 620, 624, 626, 627, 629, 630, 631, 639, 659, 705, 809, 885, 932, 943, 948, 949, 955, 964"	"N"	"0.4970821374703773"	0	"na"	"Y"	"0.0289264175304699"	0	""	"Some interesting things in this gene"	""	"shared"
"DDX21"	"DDX21"	"DDX21"	"N"	"DDX21"	"list26_COV_list4dataset2nonOrf"	"DExD-box helicase 21"	"GUA|GURDB|RH-II/GU|RH-II/GuA"	"no"	24	2352	784	0.24908	0.39255	0.0714	0.2866	0.016519	0.104259262295082	0.036564	0.185225526315789	0.050843	0.349545625	0.546	8.52013	2	"52_F_0.905,148_P_0.960"	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"DDX21"	0.039863803	0.586040651	""	NA	NA	NA	""	""	2049	683	0.25239	0.2748	0.051	0.2022	0.011212	0.116665405405405	0.027686	0.26805625	0.035817	0.393987	0.302	21.05797	0	"noneOver_0.9"	"DDX21"	"DDX21_sequences_filtered_longestORFs_mafft_mincov_prank_part1_prank"	"DDX21_all_part1"	846	24	"0.279597626583"	"0.269"	"N"	"0.0691"	17	"10, 31, 44, 58, 84, 96, 109, 170, 201, 242, 550, 705, 782, 796, 806, 821, 832"	"N"	"0.9212801509748152"	0	"na"	"N"	"0.12119261747665333"	0	"na"	"N"	"0.17552040061703517"	0	"na"	"Y"	"0.0026718076851989644"	0	""	"DDX21_bat_select_mafft_prank"	"DDX21"	875	12	"0.202913000963263"	"0.191"	"Y"	0.0096	5	"119, 163, 220, 852, 853"	"N"	"0.999998239780055"	0	"na"	"N"	"0.465970381815381"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.5106861833664071"	0	"na"	""	""	"shared"
"DNAJC11"	"DNAJC11"	"DNAJC11"	"nsp4"	"DNAJC11"	"list26_COV_list4dataset2nonOrf"	"DnaJ heat shock protein family (Hsp40) member C11"	"dJ126A5.1"	"no"	23	1680	560	0.02848	0.37563	0.0119	0.4193	1	1	1	1	0.99889	1	NA	NA	NA	""	"DNAJC11"	"ENSMLUG00000016244.2"	"ENSMLUT00000016245.2"	11	538	88.66171004	0.041426347	0.5631	1.15902	1.16651	-4039.894021	-4035.943317	0.019241151	-4037.422546	0.085429377	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"DNAJC11"	1	1	""	NA	NA	NA	""	""	1275	425	0.02296	0.18685	0.0054	0.2346	1	1	1	1	0.99958	1	NA	NA	NA	""	"DNAJC11"	"DNAJC11_sequences_filtered_longestORFs_mafft_mincov_prank"	"DNAJC11_all"	744	24	"0.053610317516"	"0.053"	"N"	"0.9975"	3	"122, 132, 458"	"N"	"0.9635426191719061"	0	"na"	"N"	"0.05232358045366291"	0	"na"	"N"	"0.9990004998331715"	0	"na"	"N"	"0.16235012670335852"	0	"na"	"DNAJC11_sequences_filtered_longestORFs_mafft_prank"	"DNAJC11"	706	12	"0.022970831251"	"0.023"	"Y"	0.0133	2	"180, 448"	"N"	"0.9999999999499778"	0	"na"	"N"	"0.9999999992951416"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.9970044955027636"	0	"na"	""	""	"shared"
"DNAJC19"	"DNAJC19"	"DNAJC19"	"nsp7"	"DNAJC19"	"list24_COV_list2nonOrf"	"DnaJ heat shock protein family (Hsp40) member C19"	"PAM18|TIM14|TIMM14"	"no"	24	351	117	0.06151	0.19118	0.0147	0.2396	1	1	1	1	0.99993	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	330	110	0.07254	0.17571	0.0156	0.2151	1	1	1	1	0.99995	1	NA	NA	NA	""	"DNAJC19"	"DNAJC19_sequences_filtered_longestORFs_D418gp2_prank"	"DNAJC19_418-2"	165	17	"0.786428940683"	"0.430"	"N"	"1.0000"	0	"na"	"N"	"0.9999999790982204"	0	"na"	"N"	"0.9989453490637974"	0	"na"	"N"	"1.0"	0	"na"	"N"	"1.0"	0	"na"	"DNAJC19_sequences_filtered_longestORFs_D130gp2_prank"	"DNAJC19_130-2"	117	9	"0.464997686211"	"0.317"	"N"	0.7685	0	"na"	"N"	"0.9999884198150295"	0	"na"	"N"	"0.9954032035149585"	0	"na"	"N"	"0.9203511472201523"	0	"na"	"N"	"0.5660912469951922"	0	"na"	"Yes duplication, but groups are not awesome after. No signs of PS though"	""	"shared"
"DNMT1"	"DNMT1"	"DNMT1"	"orf8"	"DNMT1"	"list23_COV_list1orf"	"DNA methyltransferase 1"	"ADCADN|AIM|CXXC9|DNMT|HSN1E|MCMT|m.HsaI"	"no"	24	4899	1633	0.07087	0.56215	0.0439	0.6195	0.049362	0.228968313253012	0.019073	0.122385083333333	0.022625	0.189361413043478	1.08	3.39424	6	"15_V_0.928,121_G_0.900,151_R_0.934,154_P_0.921,162_G_0.937,1419_A_0.905"	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"DNMT1"	1	1	""	NA	NA	NA	""	""	3432	1144	0.13202	0.24532	0.0322	0.2437	3.574e-05	0.0013863465	9.6131e-05	0.0037010435	0.00020218	0.00864881111111111	0.765	12.91917	7	"90_G_0.976,112_P_0.981,120_G_0.990,123_A_0.936,208_P_0.914,250_S_0.918,700_L_0.905"	"DNMT1"	"DNMT1_sequences_filtered_longestORFs_mafft_mincov_prank"	"DNMT1_all"	2343	24	"0.081848247223"	"0.063"	"Y"	"0.0000"	7	"413, 429, 565, 579, 606, 745, 2169"	"Y"	"2.0669482035016898e-16"	2	"745, 2169"	"Y"	"2.0168311185278022e-28"	5	"429, 745, 917, 1814, 2169"	"Y"	"1.0454601661378748e-23"	3	"251, 745, 2169"	"Y"	"2.1202898262187422e-30"	5	"251, 579, 745, 2085, 2169"	"DNMT1_sequences_filtered_longestORFs_mafft_prank"	"DNMT1"	2112	12	"0.128285103645"	"0.124"	"Y"	0.0399	10	"20, 24, 285, 287, 428, 487, 603, 638, 661, 799"	"N"	"0.9999997325594807"	0	"na"	"N"	"0.0986664862875594"	0	"na"	"N"	"0.5401005246443784"	0	"na"	"N"	"0.1867470969880856"	0	"na"	"Yes duplication, 2 seq wrongly assigned to the other group"	""	"shared"
"DPH5"	"DPH5"	"DPH5"	"orf9b"	"DPH5"	"list25_COV_list3dataset2orf"	"diphthamide biosynthesis 5"	"AD-018|CGI-30|HSPC143|NPD015"	"no"	24	864	288	0.16124	0.45711	0.0616	0.3821	1	1	1	1	1	1	NA	NA	NA	""	"DPH5"	"ENSMLUG00000012639.2"	"ENSMLUT00000012641.2"	9	285	89.12280702	0.075085407	6.0816	12.7134	12.71389	-2883.965457	-2883.965869	0.999588085	NA	NA	NA	""	"DPH5"	"ENSG00000117543.20"	"ENST00000427040.2"	18	47	93.61702128	0.374482718	0.2169	0.74627	0.75015	-347.53853	-347.358466	0.835216756	NA	NA	NA	""	"DPH5"	1	1	""	NA	NA	NA	""	""	726	242	0.25724	0.30547	0.056	0.2176	0.85476	1	0.91658	1	0.98338	1	NA	NA	NA	""	"DPH5"	"DPH5_sequences_filtered_longestORFs_mafft_mincov_prank"	"DPH5_all"	442	24	"0.152405412870"	"0.161"	"N"	"0.0644"	7	"210, 241, 244, 275, 343, 348, 369"	"Y"	"0.000553882037864914"	2	"241, 369"	"Y"	"9.638729171315118e-08"	2	"241, 369"	"Y"	"0.0003615898498301604"	2	"241, 369"	"Y"	"4.386407513280553e-06"	2	"241, 369"	"DPH5_sequences_filtered_longestORFs_mafft_prank"	"DPH5"	419	12	"0.091982892381"	"0.103"	"N"	1	0	"na"	"N"	"0.9999997475070223"	0	"na"	"N"	"0.9999931551872187"	0	"na"	"N"	"1.0"	0	"na"	"N"	"1.0"	0	"na"	""	""	"shared"
"DPY19L1"	"DPY19L1"	"DPY19L1"	"orf9c"	"DPY19L1"	"list26_COV_list4dataset2nonOrf"	"dpy-19 like C-mannosyltransferase 1"	"-"	"no"	24	2247	749	0.12771	0.623	0.07	0.5478	1	1	1	1	1	1	NA	NA	NA	""	"DPY19L1"	"ENSMLUG00000013912.2"	"ENSMLUT00000013920.2"	10	654	95.10703364	0.066641354	0.8845	1.9287	3.7297	-6487.933389	-6444.860734	1.97e-19	-6478.465185	2.44e-16	2	"R421, S422"	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"DPY19L1"	1	1	""	NA	NA	NA	""	""	1863	621	0.13685	0.36378	0.0436	0.3185	1	1	1	1	1	1	NA	NA	NA	""	"DPY19L1"	"DPY19L1_sequences_filtered_longestORFs_mafft_mincov_prank_part2_prank"	"DPY19L1_all_part2"	914	20	"0.106997851070"	"0.095"	"N"	"1.0000"	0	"na"	"N"	"0.9999988437509592"	0	"na"	"N"	"0.2992555688487431"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.6757041139607441"	0	"na"	"DPY19L1_sequences_filtered_longestORFs_D108gp2_prank"	"DPY19L1_108-2"	995	10	"0.047489877056"	"0.050"	"N"	0.9233	3	"167, 368, 839"	"N"	"0.9999996015831923"	0	"na"	"N"	"0.1499397686224669"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.18956941793172655"	0	"na"	""	""	"shared"
"ECSIT"	"ECSIT"	"ECSIT"	"orf9c"	"ECSIT"	"list24_COV_list2nonOrf"	"ECSIT signalling integrator"	"SITPEC"	"no"	24	1296	432	0.31623	0.90186	0.2021	0.6392	0.15025	0.488205882352941	0.24592	0.657494444444444	0.37676	1	NA	NA	NA	""	"ECSIT"	"ENSMLUG00000016345.2"	"ENSMLUT00000016348.2"	15	435	85.74712644	0.221887414	0.4374	1.97602	2.01283	-4572.631364	-4571.373419	0.284237535	NA	NA	NA	""	"ECSIT"	"ENSG00000130159.13"	"ENST00000586149.1"	17	24	91.66666667	0.383453897	0.1253	0.56044	0.59422	-148.405029	-148.085679	0.726621187	NA	NA	NA	""	"ECSIT"	0.235323181	1	""	NA	NA	NA	""	""	885	295	0.30601	0.50394	0.1098	0.3589	0.76327	1	0.94186	1	1	1	NA	NA	NA	""	"ECSIT"	"ECSIT_sequences_filtered_longestORFs_mafft_mincov_prank"	"ECSIT_all"	1436	23	"0.313480036259"	"0.265"	"N"	"0.8284"	14	"104, 119, 123, 136, 138, 153, 181, 215, 286, 326, 1058, 1123, 1153, 1174"	"N"	"0.9999953167999206"	0	"na"	"N"	"0.9999656179596921"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.06210057691441663"	0	"na"	"ECSIT_sequences_filtered_longestORFs_mafft_prank"	"ECSIT"	888	12	"0.233749083581"	"0.212"	"N"	0.586	5	"290, 357, 506, 518, 883"	"N"	"0.9999998547664396"	0	"na"	"N"	"0.999969610648547"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.9417645335847283"	0	"na"	""	""	"shared"
"EDEM3"	"EDEM3"	"EDEM3"	"orf8"	"EDEM3"	"list25_COV_list3dataset2orf"	"ER degradation enhancing alpha-mannosidase like protein 3"	"C1orf22"	"no"	24	2799	933	0.10859	0.28055	0.0285	0.2627	0.011922	0.08196375	0.011881	0.0914837	0.043177	0.307836018518519	0.692	4.73014	2	"843_H_0.920,852_T_0.970"	"EDEM3"	"ENSMLUG00000013699.2"	"ENSMLUT00000013715.2"	6	865	97.91907514	0.123634396	0.4858	0.76776	0.77242	-5826.650036	-5825.427114	0.294368763	NA	NA	NA	""	"EDEM3"	"ENSG00000116406.18"	"ENST00000367512.7"	18	906	97.46136865	0.088261229	0.1148	0.24563	0.24588	-4889.688288	-4889.259337	0.651191837	NA	NA	NA	""	"EDEM3"	0.993819675	1	""	NA	NA	NA	""	""	2409	803	0.11726	0.19769	0.0218	0.1855	0.05753	0.372389672131148	0.10846	0.71995	0.16368	1	0.487	7.23505	1	"725_H_0.919"	"EDEM3"	"EDEM3_sequences_filtered_longestORFs_mafft_mincov_prank"	"EDEM3_all"	1395	24	"0.141168127030"	"0.134"	"N"	"0.5452"	4	"16, 19, 1181, 1237"	"Y"	"4.901883242434099e-38"	1	"1181"	"Y"	"7.828310541947127e-50"	1	"1181"	"Y"	"7.552046806868053e-39"	1	"1181"	"na"	"na"	0	"na"	"EDEM3_sequences_filtered_longestORFs_mafft_prank"	"EDEM3"	1209	12	"0.111257347006"	"0.104"	"Y"	0.0245	0	"na"	"Y"	"0.02585262744376434"	1	"1036"	"Y"	"1.206627269231966e-17"	25	"3, 13, 547, 1036, 1039, 1049, 1067, 1068, 1069, 1070, 1085, 1086, 1087, 1089, 1095, 1096, 1103, 1111, 1112, 1122, 1128, 1130, 1142, 1153, 1162"	"Y"	"0.025578579910267275"	0	""	"Y"	"5.726449189570869e-07"	4	"1036, 1068, 1086, 1111"	"Very conserved overall, except Cter, ok with profile of PS"	""	"shared"
"EIF4E2"	"EIF4E2"	"EIF4E2"	"nsp2"	"EIF4E2"	"list26_COV_list4dataset2nonOrf"	"eukaryotic translation initiation factor 4E family member 2"	"4E-LP|4EHP|EIF4EL3|IF4e|h4EHP"	"no"	23	738	246	0.03395	0.21063	0.0077	0.2281	1	1	1	1	0.8217	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	630	210	0.02442	0.155	0.0044	0.1816	1	1	1	1	0.99984	1	NA	NA	NA	""	"EIF4E2"	"EIF4E2_sequences_filtered_longestORFs_mafft_mincov_prank"	"EIF4E2_all"	807	24	"0.232675533751"	"0.241"	"Y"	"0.0000"	4	"110, 351, 536, 672"	"N"	"0.9999999927376848"	0	"na"	"N"	"0.5233031918651796"	0	"na"	"Y"	"4.675171455053596e-09"	3	"591, 592, 672"	"Y"	"2.042686466690582e-09"	4	"591, 592, 643, 672"	"EIF4E2_sequences_filtered_longestORFs_mafft_prank"	"EIF4E2"	932	12	"0.044097660017"	"0.050"	"N"	0.0821	2	"45, 122"	"N"	"0.9999999618357841"	0	"na"	"N"	"0.20034306135987306"	0	"na"	"N"	"0.08118701162226868"	0	"na"	"Y"	"0.01960442446912993"	0	""	"Yes correct to keep full aln and not the groups"	""	"shared"
"EIF4H"	"EIF4H"	"EIF4H"	"nsp9"	"EIF4H"	"list26_COV_list4dataset2nonOrf"	"eukaryotic translation initiation factor 4H"	"WBSCR1|WSCR1|eIF-4H"	"no"	23	750	250	0.20373	0.49924	0.0805	0.3949	0.19382	0.561057894736842	0.33611	0.803741304347826	1	1	NA	NA	NA	""	"EIF4H"	"ENSMLUG00000009053.2"	"ENSMLUT00000009050.2"	9	233	79.39914163	0.067710536	0.247	0.48058	0.47892	-1156.799444	-1155.092524	0.181423718	NA	NA	NA	""	"EIF4H"	"ENSG00000106682.14"	"ENST00000353999.6"	8	229	93.44978166	0.65726891	0.2049	0.43151	0.43484	-1388.238382	-1388.067762	0.843141907	NA	NA	NA	""	"EIF4H"	0.975645425	1	""	NA	NA	NA	""	""	579	193	0.1625	0.31982	0.0469	0.2883	1	1	1	1	1	1	NA	NA	NA	""	"EIF4H"	"EIF4H_sequences_filtered_longestORFs_mafft_mincov_prank_part1_prank"	"EIF4H_all_part1"	557	23	"0.119037210760"	"0.131"	"N"	"1.0000"	0	"na"	"N"	"0.9999999828753517"	0	"na"	"N"	"0.9999820282085377"	0	"na"	"N"	"1.0"	0	"na"	"N"	"1.0"	0	"na"	"EIF4H_sequences_filtered_longestORFs_mafft_prank"	"EIF4H"	448	12	"0.089860319627"	"0.101"	"N"	1	1	"4"	"N"	"0.9948734298686034"	0	"na"	"N"	"0.06094369359894792"	0	"na"	"N"	"0.3828928859750981"	0	"na"	"N"	"0.26263238507076825"	0	"na"	""	""	"shared"
"ELOB"	"ELOB"	"TCEB2"	"orf10"	"TCEB2"	"list25_COV_list3dataset2orf"	"elongin B"	"SIII|TCEB2"	"no"	22	354	118	0.18231	0.74417	0.128	0.7021	1	1	1	1	0.99981	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"ELOB"	"ENSG00000103363.14"	"ENST00000572954.1"	16	67	94.02985075	0.564142855	0.2216	1.44523	1.9231	-606.091885	-596.030799	4.27e-05	-602.771538	0.00024093	1	"M1"	"TCEB2"	1	1	""	NA	NA	NA	""	""	207	69	0.18938	0.28695	0.0511	0.2698	1	1	1	1	0.99996	1	NA	NA	NA	""	"ELOB"	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	"ELOB_bat_select_mafft_prank"	"ELOB"	124	7	"0.0223993973773562"	"0.023"	"Y"	0.0017	0	"na"	"N"	"0.999999863385606"	0	"na"	"N"	"0.889234611247919"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.9990004998333987"	0	"na"	""	""	"onlybats"
"ELOC"	"ELOC"	"TCEB1"	"orf10"	"TCEB1"	"list25_COV_list3dataset2orf"	"elongin C"	"SIII|TCEB1"	"no"	22	342	114	1e-04	0.15603	0	0.1838	0.99483	1	1	1	0.99964	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	300	100	1e-04	0.09218	0	0.1258	1	1	1	1	0.99975	1	NA	NA	NA	""	"ELOC"	"ELOC_sequences_filtered_longestORFs_mafft_mincov_prank"	"ELOC_all"	750	24	"0.582849724940"	"0.530"	"N"	"0.1023"	2	"471, 591"	"N"	"0.575484626039688"	0	"na"	"N"	"0.3383121814863435"	0	"na"	"N"	"0.31317285139256007"	0	"na"	"N"	"0.09135520674742265"	0	"na"	"ELOC_sequences_filtered_longestORFs_mafft_prank"	"ELOC"	152	12	"0.123879980065"	"0.126"	"Y"	0	1	"40"	"N"	"0.11567652604194509"	0	"na"	"Y"	"0.002648634954356647"	1	"40"	"N"	"0.13574189870456868"	0	"na"	"N"	"0.05686927876009488"	0	"na"	""	""	"shared"
"EMC1"	"EMC1"	"EMC1"	"orf8"	"EMC1"	"list25_COV_list3dataset2orf"	"ER membrane protein complex subunit 1"	"CAVIPMR|KIAA0090"	"no"	22	2991	997	0.11747	0.43283	0.046	0.3913	0.1509	0.488205882352941	0.21129	0.600741544117647	0.38274	1	NA	NA	NA	""	"EMC1"	"ENSMLUG00000001556.2"	"ENSMLUT00000001561.2"	11	998	96.89378758	0.082617467	0.3467	0.90202	0.91226	-7919.562518	-7916.895299	0.069445084	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"EMC1"	0.810838121	1	""	NA	NA	NA	""	""	2442	814	0.0991	0.26514	0.025	0.2525	0.44106	1	0.73813	1	0.74199	1	NA	NA	NA	""	"EMC1"	"EMC1_sequences_filtered_longestORFs_mafft_mincov_prank"	"EMC1_all"	1180	24	"0.099734656206"	"0.095"	"Y"	"0.0000"	5	"12, 15, 52, 78, 465"	"Y"	"4.157921284243231e-05"	1	"78"	"Y"	"1.9002749520375142e-12"	6	"12, 18, 78, 369, 465, 899"	"Y"	"1.7175957015159544e-05"	1	"78"	"Y"	"2.1066429277598233e-07"	2	"12, 78"	"EMC1_sequences_filtered_longestORFs_mafft_prank"	"EMC1"	1244	12	"0.086985697800"	"0.078"	"Y"	3e-04	0	"na"	"N"	"0.9999999852489055"	0	"na"	"Y"	"0.015439278403327431"	1	"379"	"N"	"1.0"	0	"na"	"N"	"1.0"	0	"na"	""	""	"shared"
"ERC1"	"ERC1"	"ERC1"	"nsp13"	"ERC1"	"list26_COV_list4dataset2nonOrf"	"ELKS/RAB6-interacting/CAST family member 1"	"Cast2|ELKS|ERC-1|RAB6IP2"	"no"	23	3372	1124	0.03114	0.36432	0.0126	0.4043	0.99056	1	1	1	1	1	NA	NA	NA	""	"ERC1"	"ENSMLUG00000008287.2"	"ENSMLUT00000008314.2"	10	932	95.60085837	0.021071587	0.3414	0.49232	0.49314	-5619.619103	-5618.773256	0.429193677	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"ERC1"	0.991406686	1	""	NA	NA	NA	""	""	2814	938	0.041	0.24883	0.0108	0.2625	0.99661	1	0.57235	1	1	1	NA	NA	NA	""	"ERC1"	"ERC1_sequences_filtered_longestORFs_mafft_mincov_prank_part2_prank"	"ERC1_all_part2"	2964	23	"0.028298194705"	"0.026"	"N"	"1.0000"	2	"1032, 1650"	"N"	"0.9999997397626769"	0	"na"	"Y"	"0.033457191003739346"	1	"1157"	"N"	"1.0"	0	"na"	"na"	"na"	0	"na"	"ERC1_sequences_filtered_longestORFs_mafft_prank"	"ERC1"	1375	12	"0.027094668976"	"0.034"	"Y"	0	16	"15, 116, 179, 210, 252, 272, 276, 303, 733, 770, 791, 936, 1048, 1294, 1310, 1343"	"N"	"0.9999997881796159"	0	"na"	"N"	"0.10268514270834504"	0	"na"	"N"	"1.0"	0	"na"	"N"	"1.0"	0	"na"	""	""	"shared"
"ERGIC1"	"ERGIC1"	"ERGIC1"	"nsp10"	"ERGIC1"	"list24_COV_list2nonOrf"	"endoplasmic reticulum-golgi intermediate compartment 1"	"AMCN|ERGIC-32|ERGIC32|NET24"	"no"	24	873	291	0.01551	0.43192	0.0116	0.7458	1	1	1	1	1	1	NA	NA	NA	""	"ERGIC1"	"ENSMLUG00000009783.2"	"ENSMLUT00000009784.2"	11	255	80	0.124503375	0.5262	51.43345	51.43347	-2688.831553	-2688.832073	0.999480135	NA	NA	NA	""	"ERGIC1"	"ENSG00000113719.15"	"ENST00000519796.5"	19	54	94.44444444	0.243017671	0.1918	0.63351	0.88712	-364.327009	-360.880333	0.031851334	-364.22746	0.009672413	1	"P49"	"ERGIC1"	0.988383036	1	""	NA	NA	NA	""	""	612	204	0.01329	0.15529	0.0041	0.3077	1	1	1	1	0.99995	1	NA	NA	NA	""	"ERGIC1"	"ERGIC1_sequences_filtered_longestORFs_mafft_mincov_prank"	"ERGIC1_all"	2087	24	"0.023345501207"	"0.031"	"N"	"0.1159"	3	"716, 881, 1888"	"N"	"0.999999995759481"	0	"na"	"N"	"0.999999995701728"	0	"na"	"N"	"0.47568471864150097"	0	"na"	"N"	"0.09807723484934663"	0	"na"	"ERGIC1_sequences_filtered_longestORFs_mafft_prank"	"ERGIC1"	1465	12	"0.022575771558"	"0.023"	"Y"	9e-04	0	"na"	"N"	"0.9999999999167812"	0	"na"	"Y"	"0.00011792618765757527"	4	"311, 555, 557, 593"	"Y"	"0.0003889732433008302"	1	"42"	"Y"	"4.010538272964363e-05"	1	"42"	""	""	"shared"
"ERLEC1"	"ERLEC1"	"ERLEC1"	"orf8"	"ERLEC1"	"list25_COV_list3dataset2orf"	"endoplasmic reticulum lectin 1"	"C2orf30|CIM|CL24936|CL25084|HEL117|XTP3-B|XTP3TPB"	"yes"	24	1452	484	0.11441	0.31978	0.0361	0.3156	0.0019924	0.0229731764705882	0.0075726	0.0647878	0.0099282	0.10485527027027	0.912	6.7714	3	"14_G_0.985,310_P_0.959,318_V_0.984"	"ERLEC1"	"ENSMLUG00000016924.2"	"ENSMLUT00000016927.2"	10	496	87.90322581	0.133685784	0.1944	0.46346	0.46745	-2827.547059	-2827.123573	0.654760342	NA	NA	NA	""	"ERLEC1"	"ENSG00000068912.13"	"ENST00000378239.5"	11	430	99.30232558	0.056894751	0.0834	0.11564	0.11758	-2022.182643	-2021.243196	0.390843912	NA	NA	NA	""	"ERLEC1"	1	1	""	NA	NA	NA	""	""	1254	418	0.11955	0.22632	0.0274	0.2296	0.038858	0.311673541666667	0.11694	0.734170161290323	0.1235	0.963556862745098	0.487	9.25976	1	"273_V_0.976"	"ERLEC1"	"ERLEC1_sequences_filtered_longestORFs_mafft_mincov_prank"	"ERLEC1_all"	948	24	"0.104367811799"	"0.091"	"N"	"0.7714"	1	"594"	"N"	"0.08373381050046967"	0	"na"	"Y"	"1.208691486785895e-05"	3	"80, 84, 594"	"N"	"0.13614973585056028"	0	"na"	"Y"	"0.008906267825990811"	1	"594"	"ERLEC1_sequences_filtered_longestORFs_mafft_prank"	"ERLEC1"	667	12	"0.082385943670"	"0.072"	"N"	1	0	"na"	"N"	"0.9999995963563284"	0	"na"	"N"	"0.44653121358043824"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.8179124315538415"	0	"na"	""	""	"shared"
"ERMP1"	"ERMP1"	"ERMP1"	"orf9c"	"ERMP1"	"list24_COV_list2nonOrf"	"endoplasmic reticulum metallopeptidase 1"	"FXNA|KIAA1815|bA207C16.3"	"no"	24	2727	909	0.16093	0.4408	0.0587	0.3649	0.18911	0.560856153846154	0.21221	0.600741544117647	0.22666	0.969601111111111	NA	NA	NA	""	"ERMP1"	"ENSMLUG00000002419.2"	"ENSMLUT00000002424.2"	10	794	99.37027708	0.116046819	0.3082	0.87456	0.87518	-6355.754476	-6355.716447	0.962685023	NA	NA	NA	""	"ERMP1"	"ENSG00000099219.13"	"ENST00000487088.5"	19	352	98.86363636	0.138268187	0.1396	0.3606	0.36081	-2174.679364	-2174.677461	0.99809881	NA	NA	NA	""	"ERMP1"	0.858106691	1	""	NA	NA	NA	""	""	2217	739	0.15328	0.26405	0.0345	0.2251	0.89125	1	0.8537	1	0.99145	1	NA	NA	NA	""	"ERMP1"	"ERMP1_sequences_filtered_longestORFs_mafft_mincov_prank"	"ERMP1_all"	1474	24	"0.146897076813"	"0.144"	"N"	"1.0000"	1	"1029"	"N"	"0.9999994656338067"	0	"na"	"N"	"0.4670119434862723"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.41644536602029525"	0	"na"	"ERMP1_sequences_filtered_longestORFs_mafft_prank"	"ERMP1"	1194	12	"0.149068402197"	"0.170"	"N"	0.1256	4	"540, 835, 1061, 1171"	"N"	"0.9999962720800251"	0	"na"	"Y"	"0.01098965332408625"	3	"192, 540, 835"	"Y"	"1.528971094116435e-54"	0	""	"N"	"0.640183772061703"	0	"na"	""	""	"shared"
"ERO1B"	"ERO1B"	"ERO1LB"	"orf8"	"ERO1LB"	"list23_COV_list1orf"	"elongin B"	"SIII|TCEB2"	"no"	24	1404	468	0.15134	0.29031	0.0379	0.2503	0.18383	0.556234765625	0.35896	0.812938823529412	0.43446	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"ERO1B"	"ENSG00000086619.13"	"ENST00000366589.1"	16	71	100	0.049074312	0.1459	0.14276	0.14414	-332.486487	-332.12016	0.693276063	NA	NA	NA	""	"ERO1LB"	0.963362268	1	""	NA	NA	NA	""	""	1188	396	0.15311	0.16919	0.0223	0.146	1	1	1	1	1	1	NA	NA	NA	""	"ERO1B"	"ERO1B_sequences_filtered_longestORFs_mafft_mincov_prank_part1_prank"	"ERO1B_all_part1"	713	24	"0.144332632602"	"0.124"	"Y"	"0.0000"	4	"142, 260, 657, 659"	"N"	"0.11579955951793047"	0	"na"	"Y"	"0.00040734388036182246"	2	"117, 659"	"Y"	"0.03212887887065816"	1	"659"	"Y"	"0.003883571729315563"	2	"117, 659"	"ERO1B_bat_select_mafft_prank"	"ERO1B"	777	11	"0.036193322757664"	"0.039"	"N"	1	1	"386"	"N"	"0.999999978684628"	0	"na"	"N"	"0.183149246065694"	0	"na"	"N"	"1.0"	0	"na"	"N"	"1.0"	0	"na"	""	""	"shared"
"ERP44"	"ERP44"	"ERP44"	"orf8"	"ERP44"	"list23_COV_list1orf"	"endoplasmic reticulum protein 44"	"PDIA10|TXNDC4"	"no"	21	1221	407	0.0756	0.16966	0.0134	0.177	1	1	1	1	0.9998	1	NA	NA	NA	""	"ERP44"	"ENSMLUG00000011752.2"	"ENSMLUT00000011749.2"	10	407	94.34889435	0.141535311	0.2403	0.49346	0.49686	-2435.949038	-2435.276063	0.510188507	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"ERP44"	0.295409685	1	""	NA	NA	NA	""	""	1107	369	0.10469	0.12605	0.0133	0.127	1	1	1	1	0.99989	1	NA	NA	NA	""	"ERP44"	"ERP44_sequences_filtered_longestORFs_mafft_mincov_prank"	"ERP44_all"	490	24	"0.061612699441"	"0.061"	"N"	"1.0000"	0	"na"	"N"	"0.9999996678757822"	0	"na"	"N"	"0.9817544807540798"	0	"na"	"N"	"1.0"	0	"na"	"N"	"1.0"	0	"na"	"ERP44_sequences_filtered_longestORFs_mafft_prank"	"ERP44"	406	12	"0.125984511307"	"0.117"	"N"	0.3705	1	"375"	"N"	"0.9765941371983475"	0	"na"	"Y"	"0.029236998391373198"	2	"151, 349"	"N"	"0.8244819741389342"	0	"na"	"N"	"0.2065939513149769"	0	"na"	""	""	"shared"
"ETFA"	"ETFA"	"ETFA"	"M"	"ETFA"	"list26_COV_list4dataset2nonOrf"	"electron transfer flavoprotein subunit alpha"	"EMA|GA2|MADD"	"no"	24	1005	335	0.13168	0.35074	0.0413	0.3138	1	1	1	1	1	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"ETFA"	0.479248898	1	""	NA	NA	NA	""	""	837	279	0.16675	0.19725	0.0282	0.1694	1	1	1	1	1	1	NA	NA	NA	""	"ETFA"	"ETFA_sequences_filtered_longestORFs_mafft_mincov_prank"	"ETFA_all"	565	24	"0.146391319474"	"0.142"	"N"	"0.4242"	0	"na"	"N"	"0.9999989998773798"	0	"na"	"N"	"0.9999999456895253"	0	"na"	"N"	"1.0"	0	"na"	"N"	"1.0"	0	"na"	"ETFA_bat_select_mafft_prank"	"ETFA"	463	9	"0.146615831118747"	"0.130"	"N"	0.0544	4	"95, 149, 252, 281"	"N"	"0.999999019068154"	0	"na"	"N"	"0.0850280041309942"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.997004495503217"	0	"na"	""	""	"shared"
"EXOSC2"	"EXOSC2"	"EXOSC2"	"nsp8"	"EXOSC2"	"list24_COV_list2nonOrf"	"exosome component 2"	"RRP4|Rrp4p|SHRF|hRrp4p|p7"	"no"	24	882	294	0.13906	0.58075	0.072	0.518	0.20088	0.57288	0.16395	0.509038306451613	0.43972	1	NA	NA	NA	""	"EXOSC2"	"ENSMLUG00000008776.2"	"ENSMLUT00000008779.2"	8	296	98.98648649	0.024424073	0.4064	0.69537	0.69892	-2040.595915	-2039.325761	0.280788377	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"EXOSC2"	0.535813676	1	""	NA	NA	NA	""	""	717	239	0.15613	0.4294	0.0586	0.3751	0.28082	1	0.44689	1	0.5577	1	NA	NA	NA	""	"EXOSC2"	"EXOSC2_sequences_filtered_longestORFs_mafft_mincov_prank"	"EXOSC2_all"	356	24	"0.091497263455"	"0.086"	"Y"	"0.0029"	1	"273"	"N"	"0.39378783387535415"	0	"na"	"Y"	"0.0031125919477734336"	1	"273"	"N"	"0.33187396687004317"	0	"na"	"Y"	"0.004668114668763444"	1	"273"	"EXOSC2_sequences_filtered_longestORFs_mafft_prank"	"EXOSC2"	385	12	"0.025921840818"	"0.026"	"N"	0.3959	0	"na"	"N"	"0.9999998283474417"	0	"na"	"N"	"0.37938250291261894"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.32013900080090807"	0	"na"	""	""	"shared"
"EXOSC3"	"EXOSC3"	"EXOSC3"	"nsp8"	"EXOSC3"	"list24_COV_list2nonOrf"	"exosome component 3"	"CGI-102|PCH1B|RRP40|Rrp40p|bA3J10.7|hRrp-40|p10"	"no"	24	834	278	0.20018	0.45795	0.0679	0.339	0.026965	0.1483075	0.064948	0.27478	0.086098	0.534640806451613	5.592	2.83124	4	"4_G_0.946,5_V_0.983,60_C_0.964,97_G_0.943"	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"EXOSC3"	"ENSG00000107371.12"	"ENST00000396521.3"	19	165	92.72727273	0.218656939	0.1801	0.60416	0.62059	-1150.429321	-1148.780749	0.192324352	NA	NA	NA	""	"EXOSC3"	1	1	""	NA	NA	NA	""	""	636	212	0.1116	0.24064	0.0246	0.2204	0.1418	0.6824125	0.33955	1	0.33824	1	NA	NA	NA	""	"EXOSC3"	"EXOSC3_sequences_filtered_longestORFs_mafft_mincov_prank"	"EXOSC3_all"	660	24	"na"	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"EXOSC3_sequences_filtered_longestORFs_mafft_prank"	"EXOSC3"	595	12	"0.227318217329"	"0.253"	"Y"	1e-04	5	"236, 237, 359, 516, 586"	"N"	"0.9999975995671482"	0	"na"	"N"	"0.9999954704296937"	0	"na"	"N"	"1.0"	0	"na"	"N"	"1.0"	0	"na"	"out"	""	"shared"
"EXOSC5"	"EXOSC5"	"EXOSC5"	"nsp8"	"EXOSC5"	"list24_COV_list2nonOrf"	"exosome component 5"	"RRP41B|RRP46|Rrp46p|hRrp46p|p12B"	"no"	24	708	236	0.14785	0.54807	0.0734	0.4966	0.11544	0.414623611111111	0.12856	0.430396521739131	0.30715	1	NA	NA	NA	""	"EXOSC5"	"ENSMLUG00000013104.2"	"ENSMLUT00000013103.2"	11	236	96.61016949	0.119799705	0.3784	1.00915	1.01642	-1908.268348	-1908.145027	0.883979859	NA	NA	NA	""	"EXOSC5"	"ENSG00000077348.8"	"ENST00000593771.1"	16	133	98.4962406	0.243215764	0.1784	0.66897	0.72757	-1008.164727	-1003.142205	0.006587891	-1007.649985	0.002676909	2	"S91, W93"	"EXOSC5"	1	1	""	NA	NA	NA	""	""	474	158	0.14589	0.2939	0.0403	0.2765	0.03632	0.297514893617021	0.10835	0.71995	0.12433	0.963556862745098	1.425	7.51103	1	"8_I_0.959"	"EXOSC5"	"EXOSC5_sequences_filtered_longestORFs_mafft_mincov_prank"	"EXOSC5_all"	655	24	"0.158412543907"	"0.144"	"N"	"0.0546"	5	"45, 75, 85, 195, 527"	"N"	"0.9999983293078317"	0	"na"	"N"	"0.9999896164493057"	0	"na"	"N"	"0.11452066407509162"	0	"na"	"N"	"0.06056730820722026"	0	"na"	"EXOSC5_sequences_filtered_longestORFs_mafft_prank"	"EXOSC5"	262	12	"0.160152245278"	"0.126"	"N"	1	1	"262"	"N"	"0.9999987936937942"	0	"na"	"N"	"0.11318162974892028"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.43823499246502895"	0	"na"	""	""	"shared"
"EXOSC8"	"EXOSC8"	"EXOSC8"	"nsp8"	"EXOSC8"	"list24_COV_list2nonOrf"	"exosome component 8"	"CIP3|EAP2|OIP2|PCH1C|RRP43|Rrp43p|bA421P11.3|p9"	"no"	23	831	277	0.16492	0.41639	0.061	0.37	0.08173	0.324392268041237	0.11356	0.39746	0.21814	0.9543625	7.555	2.27778	2	"70_S_0.979,76_K_0.926"	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"EXOSC8"	0.763915432	1	""	NA	NA	NA	""	""	732	244	0.1998	0.30907	0.0519	0.2596	0.0037775	0.0469141129032258	0.0099798	0.118475	0.014981	0.192256166666667	4.977	4.53395	6	"57_S_0.996,58_A_0.929,59_P_0.902,60_D_0.911,61_K_0.972,62_G_0.924"	"EXOSC8"	"EXOSC8_sequences_filtered_longestORFs_mafft_mincov_prank"	"EXOSC8_all"	615	24	"0.090310320350"	"0.095"	"N"	"0.5335"	1	"393"	"N"	"0.9999997629786602"	0	"na"	"N"	"0.912799268290154"	0	"na"	"N"	"1.0"	0	"na"	"N"	"1.0"	0	"na"	"EXOSC8_sequences_filtered_longestORFs_mafft_prank"	"EXOSC8"	423	12	"0.082600654877"	"0.097"	"N"	0.1557	0	"na"	"N"	"0.9309740292184903"	0	"na"	"N"	"0.6234791303960312"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.9910403787728692"	0	"na"	""	""	"shared"
"F2RL1"	"F2RL1"	"F2RL1"	"orf9c"	"F2RL1"	"list24_COV_list2nonOrf"	"F2R like trypsin receptor 1"	"GPR11|PAR2"	"no"	24	1194	398	0.21906	0.49746	0.0834	0.3809	0.54297	1	0.75811	1	0.83158	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"F2RL1"	"ENSG00000164251.4"	"ENST00000296677.4"	19	398	89.94974874	0.217466052	0.2177	0.64829	0.70554	-2682.34684	-2676.838331	0.004052145	-2681.73712	0.001747419	3	"K41, S21, S37"	""	NA	NA	""	NA	NA	NA	""	""	1005	335	0.22368	0.35318	0.0598	0.2675	1	1	0.98522	1	1	1	NA	NA	NA	""	"F2RL1"	"F2RL1_sequences_filtered_longestORFs_mafft_mincov_prank"	"F2RL1_all"	456	24	"0.172965347235"	"0.174"	"N"	"0.8985"	7	"52, 93, 116, 117, 146, 197, 243"	"N"	"0.9999991196286157"	0	"na"	"N"	"0.4428525110189645"	0	"na"	"N"	"0.9980019986678341"	0	"na"	"N"	"0.14198980780184772"	0	"na"	"F2RL1_sequences_filtered_longestORFs_mafft_prank"	"F2RL1"	658	12	"0.263764597190"	"0.275"	"N"	0.9952	2	"291, 585"	"N"	"0.9996548647569119"	0	"na"	"N"	"0.3131339900240242"	0	"na"	"N"	"0.30635828375793595"	0	"na"	"Y"	"0.03815875724067897"	0	""	""	""	"shared"
"FAM162A"	"FAM162A"	"FAM162A"	"nsp7"	"FAM162A"	"list26_COV_list4dataset2nonOrf"	"family with sequence similarity 162 member A"	"C3orf28|E2IG5|HGTD-P"	"no"	24	468	156	0.78824	0.79174	0.2465	0.3127	0.10955	0.405545673076923	0.25724	0.669561824324324	0.28032	1	NA	NA	NA	""	"FAM162A"	"ENSMLUG00000000941.2"	"ENSMLUT00000000941.2"	12	156	75.64102564	0.444238485	0.4761	1.8729	1.88327	-1382.256543	-1381.452888	0.447689664	NA	NA	NA	""	"FAM162A"	"ENSG00000114023.15"	"ENST00000469967.1"	18	142	76.05633803	0.709364639	0.203	0.6908	0.69927	-839.142618	-836.007332	0.043487315	-839.131843	0.01242619	2	"D65, F117"	"FAM162A"	0.871744117	1	""	NA	NA	NA	""	""	372	124	1.22917	0.56264	0.1969	0.1602	0.046286	0.339787924528302	0.072164	0.544767450980392	0.072172	0.677712682926829	60.853	2.14101	2	"53_D_0.922,82_I_0.965"	"FAM162A"	"FAM162A_sequences_filtered_longestORFs_mafft_mincov_prank"	"FAM162A_all"	441	23	"0.495702659669"	"0.486"	"N"	"0.0732"	4	"216, 248, 359, 417"	"N"	"0.9999982422493291"	0	"na"	"N"	"0.9969494196392291"	0	"na"	"N"	"0.8521437889663354"	0	"na"	"N"	"1.0"	0	"na"	"FAM162A_sequences_filtered_longestORFs_mafft_prank"	"FAM162A"	165	12	"0.314688153010"	"0.297"	"N"	1	1	"110"	"N"	"0.9999961526695074"	0	"na"	"N"	"0.9997915583517777"	0	"na"	"N"	"0.8564151774836369"	0	"na"	"N"	"1.0"	0	"na"	""	""	"shared"
"FAM8A1"	"FAM8A1"	"FAM8A1"	"M"	"FAM8A1"	"list26_COV_list4dataset2nonOrf"	"family with sequence similarity 8 member A1"	"AHCP"	"no"	24	1248	416	0.34231	0.64012	0.1349	0.394	1	1	1	1	1	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"FAM8A1"	"ENSG00000137414.5"	"ENST00000259963.3"	5	414	94.92753623	0.25653807	0.1723	0.35366	0.35383	-2310.944362	-2310.929873	0.98561546	NA	NA	NA	""	"FAM8A1"	1	1	""	NA	NA	NA	""	""	768	256	0.30502	0.30989	0.0611	0.2005	0.95466	1	0.97397	1	0.99838	1	NA	NA	NA	""	"FAM8A1"	"FAM8A1_sequences_filtered_longestORFs_mafft_mincov_prank"	"FAM8A1_all"	513	23	"0.319375325659"	"0.315"	"Y"	"0.0000"	7	"39, 65, 157, 164, 196, 203, 429"	"N"	"0.8832244818632264"	0	"na"	"N"	"0.3500512376933276"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.5504605431263127"	0	"na"	"FAM8A1_sequences_filtered_longestORFs_mafft_prank"	"FAM8A1"	415	7	"0.300775892864"	"0.310"	"Y"	0	4	"81, 167, 370, 372"	"N"	"0.5340650845200143"	0	"na"	"N"	"0.3150290637888533"	0	"na"	"N"	"0.3246524673583498"	0	"na"	"N"	"0.17325340282141558"	0	"na"	""	""	"shared"
"FAM98A"	"FAM98A"	"FAM98A"	"N"	"FAM98A"	"list26_COV_list4dataset2nonOrf"	"family with sequence similarity 98 member A"	"-"	"no"	24	1572	524	0.0412	0.21585	0.0092	0.2224	1	1	1	1	0.99963	1	NA	NA	NA	""	"FAM98A"	"ENSMLUG00000002455.2"	"ENSMLUT00000002452.2"	12	526	84.79087452	0.102934391	0.2089	0.51286	0.51334	-3021.009729	-3020.975453	0.966304768	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"FAM98A"	1	1	""	NA	NA	NA	""	""	1377	459	0.04339	0.15011	0.0071	0.1639	1	1	1	1	0.99978	1	NA	NA	NA	""	"FAM98A"	"FAM98A_sequences_filtered_longestORFs_mafft_mincov_prank"	"FAM98A_all"	534	24	"0.062431170167"	"0.063"	"N"	"0.1823"	2	"147, 463"	"N"	"0.9999984346830816"	0	"na"	"N"	"0.9983244449715577"	0	"na"	"N"	"0.9990004998331715"	0	"na"	"N"	"0.9990004998331715"	0	"na"	"FAM98A_sequences_filtered_longestORFs_mafft_prank"	"FAM98A"	578	12	"0.098310121572"	"0.097"	"N"	1	2	"257, 483"	"N"	"0.9999995394556359"	0	"na"	"N"	"0.07255626993746797"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.9733612415242943"	0	"na"	""	""	"shared"
"FAR2"	"FAR2"	"FAR2"	"orf9c"	"FAR2"	"list24_COV_list2nonOrf"	"fatty acyl-CoA reductase 2"	"HEL-S-81|MLSTD1|SDR10E2"	"no"	23	1551	517	0.27553	0.53622	0.1029	0.3735	0.22466	0.613433333333333	0.25739	0.669561824324324	0.47255	1	NA	NA	NA	""	"FAR2"	"ENSMLUG00000014544.2"	"ENSMLUT00000014548.2"	6	516	99.41860465	0.123976275	0.4296	0.91673	0.92826	-3793.745323	-3792.274584	0.229755633	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"FAR2"	1	1	""	NA	NA	NA	""	""	1302	434	0.32665	0.38533	0.0828	0.2534	0.010923	0.116665405405405	0.018428	0.197077222222222	0.039065	0.417778472222222	19	1.78557	5	"241_S_0.979,246_L_0.978,252_H_0.931,281_S_0.920,301_F_0.936"	"FAR2"	"FAR2_sequences_filtered_longestORFs_mafft_mincov_prank"	"FAR2_all"	600	23	"0.182877187700"	"0.178"	"Y"	"0.0318"	8	"90, 258, 355, 361, 366, 390, 394, 426"	"N"	"0.9999987208547277"	0	"na"	"Y"	"0.011029202919481548"	7	"38, 57, 350, 355, 390, 395, 434"	"N"	"1.0"	0	"na"	"N"	"0.5548818892753271"	0	"na"	"FAR2_sequences_filtered_longestORFs_mafft_prank"	"FAR2"	647	12	"0.286288870471"	"0.294"	"N"	0.1165	13	"77, 86, 220, 253, 382, 404, 414, 448, 473, 476, 480, 491, 492"	"N"	"0.9999983422953944"	0	"na"	"Y"	"0.024591036714567804"	0	""	"N"	"1.0"	0	"na"	"Y"	"0.015452260123908388"	0	""	""	""	"shared"
"FASTKD5"	"FASTKD5"	"FASTKD5"	"M"	"FASTKD5"	"list26_COV_list4dataset2nonOrf"	"FAST kinase domains 5"	"dJ1187M17.5"	"yes"	24	2298	766	0.67059	0.70536	0.2053	0.3062	2.7703e-08	2.66641375e-06	1.2968e-07	9.98536e-06	2.0219e-07	1.94607875e-05	3.702	5.3533	8	"41_Q_0.959,75_H_0.998,115_M_0.997,180_V_0.943,253_Y_0.953,257_K_0.948,329_S_0.990,720_N_0.919"	"FASTKD5"	"ENSMLUG00000000343.2"	"ENSMLUT00000000340.2"	14	767	97.52281617	0.23719054	0.2971	1.29358	1.29944	-7754.59961	-7752.020331	0.075828657	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	2013	671	0.64965	0.56536	0.1635	0.2517	3.4038e-06	0.0002184105	1.6149e-05	0.0010362275	2.161e-05	0.00138664166666667	2.928	6.1161	5	"33_Q_0.973,152_V_0.963,224_Y_0.970,227_K_0.968,293_S_0.998"	"FASTKD5"	"FASTKD5_sequences_filtered_longestORFs_mafft_mincov_prank"	"FASTKD5_all"	856	24	"na"	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"FASTKD5_sequences_filtered_longestORFs_mafft_prank"	"FASTKD5"	817	12	"0.374982035489"	"0.367"	"N"	0.9776	10	"138, 308, 366, 515, 520, 594, 600, 652, 698, 722"	"N"	"0.9999991593125638"	0	"na"	"N"	"0.8774701783296314"	0	"na"	"N"	"0.9139311852710953"	0	"na"	"N"	"0.5241381418084765"	0	"na"	""	""	"shared"
"FBLN5"	"FBLN5"	"FBLN5"	"nsp9"	"FBLN5"	"list26_COV_list4dataset2nonOrf"	"fibulin 5"	"ADCL2|ARCL1A|ARMD3|DANCE|EVEC|FIBL-5|HNARMD|UP50"	"no"	24	1347	449	0.03177	0.34357	0.0124	0.3908	0.99314	1	0.60486	1	1	1	NA	NA	NA	""	"FBLN5"	"ENSMLUG00000011592.2"	"ENSMLUT00000011600.2"	10	443	95.03386005	0.072138666	0.3908	1.02413	1.01319	-3407.255769	-3403.439564	0.022011175	-3404.234477	0.207350995	NA	""	"FBLN5"	"ENSG00000140092.14"	"ENST00000557570.1"	14	36	91.66666667	0.162003072	0.1315	0.27035	0.39032	-175.924339	-169.671374	0.001924739	-175.883204	0.000423929	1	"Q26"	"FBLN5"	0.952555539	1	""	NA	NA	NA	""	""	1005	335	0.03055	0.20975	0.008	0.2623	0.77156	1	0.45009	1	0.95874	1	NA	NA	NA	""	"FBLN5"	"FBLN5_sequences_filtered_longestORFs_mafft_mincov_prank_part2_prank"	"FBLN5_all_part2"	833	23	"0.030690326246"	"0.035"	"Y"	"0.0407"	3	"276, 435, 513"	"N"	"0.999999999134161"	0	"na"	"N"	"0.4336451674061179"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.889585193163243"	0	"na"	"FBLN5_sequences_filtered_longestORFs_mafft_prank"	"FBLN5"	483	12	"0.042568879668"	"0.060"	"N"	0.445	6	"17, 20, 24, 28, 337, 452"	"N"	"0.9999996906595267"	0	"na"	"Y"	"0.00010356540885555263"	4	"52, 77, 337, 343"	"N"	"1.0"	0	"na"	"N"	"0.07207846223875822"	0	"na"	""	""	"shared"
"FBN1"	"FBN1"	"FBN1"	"nsp9"	"FBN1"	"list24_COV_list2nonOrf"	"fibrillin 1"	"ACMICD|ECTOL1|FBN|GPHYSD2|MASS|MFLS|MFS1|OCTD|SGS|SSKS|WMS|WMS2"	"no"	24	8622	2874	0.03922	0.35339	0.0151	0.385	0.060761	0.259155769230769	0.0051117	0.04685725	0.19201	0.886554166666667	0.191	3.70837	2	"10_L_0.982,125_M_0.908"	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"FBN1"	1	1	""	NA	NA	NA	""	""	6828	2276	0.05084	0.19457	0.0115	0.227	0.90797	1	0.72665	1	0.99503	1	NA	NA	NA	""	"FBN1"	"FBN1_sequences_filtered_longestORFs_mafft_mincov_prank"	"FBN1_all"	3406	24	"0.038434217562"	"0.039"	"N"	"0.8306"	8	"237, 351, 434, 527, 699, 1776, 2386, 2396"	"N"	"0.9999991758489827"	0	"na"	"Y"	"5.104448658255552e-10"	5	"237, 351, 1651, 2474, 3171"	"N"	"0.9990004998331715"	0	"na"	"Y"	"0.002831354669654163"	1	"237"	"FBN1_sequences_filtered_longestORFs_mafft_prank"	"FBN1"	3278	12	"0.054493632386"	"0.053"	"Y"	1e-04	13	"260, 264, 591, 601, 945, 1111, 1273, 2468, 2472, 2474, 2531, 2639, 2970"	"N"	"0.9999994289357158"	0	"na"	"Y"	"2.7685531965957994e-30"	46	"5, 40, 264, 483, 534, 547, 579, 585, 591, 594, 601, 605, 609, 610, 702, 821, 944, 945, 956, 1000, 1010, 1075, 1086, 1111, 1116, 1158, 1185, 1306, 1314, 2073, 2176, 2358, 2472, 2493, 2503, 2531, 2547, 2639, 2663, 2709, 2739, 2964, 2975, 2978, 2989, 2992"	"N"	"1.0"	0	"na"	"N"	"0.5236142656478218"	0	"na"	""	""	"shared"
"FBN2"	"FBN2"	"FBN2"	"nsp9"	"FBN2"	"list24_COV_list2nonOrf"	"fibrillin 2"	"CCA|DA9|EOMD"	"no"	24	8745	2915	0.06871	0.37544	0.0263	0.3835	0.37008	0.84406124260355	0.17475	0.525615234375	0.65545	1	NA	NA	NA	""	"FBN2"	"ENSMLUG00000008374.2"	"ENSMLUT00000008504.2"	8	2914	94.47494852	0.016657993	0.3658	0.61556	0.61598	-17859.44955	-17857.26975	0.113063915	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"FBN2"	1	1	""	NA	NA	NA	""	""	7026	2342	0.08992	0.21166	0.0192	0.2131	0.48817	1	0.72441	1	0.76977	1	NA	NA	NA	""	"FBN2"	"FBN2_sequences_filtered_longestORFs_D262gp2_prank"	"FBN2_262-2"	2986	23	"0.058141909331"	"0.055"	"Y"	"0.0181"	16	"2, 17, 146, 151, 448, 535, 626, 1117, 1261, 1448, 2578, 2885, 2918, 2927, 2949, 2961"	"N"	"0.9999994367537278"	0	"na"	"Y"	"2.137785086310192e-06"	3	"2859, 2918, 2949"	"N"	"1.0"	0	"na"	"N"	"0.08399483249039745"	0	"na"	"FBN2_sequences_filtered_longestORFs_mafft_prank"	"FBN2"	3160	12	"0.023665389839"	"0.023"	"N"	0.0771	0	"na"	"N"	"0.9999997339728351"	0	"na"	"Y"	"0.0014312589561602672"	1	"557"	"N"	"1.0"	0	"na"	"Y"	"0.00012666053537745443"	0	""	""	""	"shared"
"FBXL12"	"FBXL12"	"FBXL12"	"orf8"	"FBXL12"	"list23_COV_list1orf"	"F-box and leucine rich repeat protein 12"	"Fbl12"	"no"	24	981	327	0.06466	0.62178	0.05	0.7731	0.11156	0.409053333333333	0.030557	0.165459097222222	0.30813	1	1.298	2.70583	2	"57_K_0.913,264_V_0.951"	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"FBXL12"	"ENSG00000127452.8"	"ENST00000586073.1"	16	135	91.85185185	0.574873298	0.1529	0.57689	0.58283	-925.793612	-925.653943	0.869646041	NA	NA	NA	""	"FBXL12"	1	1	""	NA	NA	NA	""	""	735	245	0.06852	0.3738	0.0315	0.4602	0.067353	0.398937	0.16258	0.910776086956522	0.21116	1	0.49	13.3344	1	"35_K_0.953"	"FBXL12"	"FBXL12_sequences_filtered_longestORFs_mafft_mincov_prank"	"FBXL12_all"	591	24	"0.073022781587"	"0.055"	"N"	"0.1536"	1	"322"	"N"	"0.9999994807423247"	0	"na"	"Y"	"0.03536570274492349"	1	"529"	"N"	"1.0"	0	"na"	"Y"	"0.04504920239354142"	0	""	"FBXL12_sequences_filtered_longestORFs_mafft_prank"	"FBXL12"	448	11	"0.180408268769"	"0.178"	"N"	0.9491	2	"126, 217"	"N"	"0.9999997133555054"	0	"na"	"N"	"0.9999958146114571"	0	"na"	"N"	"1.0"	0	"na"	"N"	"1.0"	0	"na"	""	""	"shared"
"FKBP10"	"FKBP10"	"FKBP10"	"orf8"	"FKBP10"	"list25_COV_list3dataset2orf"	"FK506 binding protein 10"	"BRKS1|FKBP65|OI11|OI6|PPIASE|hFKBP65"	"no"	24	1749	583	0.05854	0.48767	0.036	0.6153	1	1	0.80844	1	1	1	NA	NA	NA	""	"FKBP10"	"ENSMLUG00000011865.2"	"ENSMLUT00000011863.2"	12	583	91.42367067	0.09180607	0.3317	1.12346	1.12763	-4623.843793	-4621.404193	0.087195723	NA	NA	NA	""	"FKBP10"	"ENSG00000141756.18"	"ENST00000455106.1"	10	386	98.1865285	0.303872044	0.2268	0.56093	0.63872	-2473.075379	-2461.017224	5.8e-06	-2473.053949	9.27e-07	7	"R112, K149, A154, D155, S143, Q157, G141"	"FKBP10"	0.690158345	1	""	NA	NA	NA	""	""	1188	396	0.0486	0.24802	0.0155	0.3179	1	1	1	1	1	1	NA	NA	NA	""	"FKBP10"	"FKBP10_sequences_filtered_longestORFs_mafft_mincov_prank"	"FKBP10_all"	762	24	"0.105142268569"	"0.077"	"N"	"0.1334"	5	"186, 266, 290, 650, 684"	"N"	"0.9999997345549115"	0	"na"	"N"	"0.7034130703651661"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.4733122312095017"	0	"na"	"FKBP10_sequences_filtered_longestORFs_mafft_prank"	"FKBP10"	762	12	"0.072710369966"	"0.065"	"N"	1	2	"292, 534"	"N"	"0.999999733494441"	0	"na"	"Y"	"1.7077542347156384e-05"	4	"13, 404, 633, 654"	"N"	"1.0"	0	"na"	"N"	"0.07368176001775298"	0	"na"	""	""	"shared"
"FKBP15"	"FKBP15"	"FKBP15"	"nsp2"	"FKBP15"	"list24_COV_list2nonOrf"	"FK506 binding protein 15"	"FKBP133|KIAA0674|PPP1R76"	"no"	24	3669	1223	0.36084	0.47497	0.1016	0.2815	0.055782	0.24535	0.11876	0.411370796460177	0.15808	0.76076	11.532	1.87074	2	"970_Q_0.929,1040_L_0.933"	"FKBP15"	"ENSMLUG00000015278.2"	"ENSMLUT00000015293.2"	9	1211	93.22873658	0.283789285	0.2849	1.02448	1.02768	-9968.379835	-9967.309891	0.343027726	NA	NA	NA	""	"FKBP15"	"ENSG00000119321.8"	"ENST00000238256.7"	18	1220	96.8852459	0.276092563	0.1507	0.4982	0.49595	-8411.546874	-8409.134261	0.089580914	NA	NA	NA	""	"FKBP15"	0.822906741	1	""	NA	NA	NA	""	""	3096	1032	0.44951	0.30322	0.0738	0.1642	1	1	1	1	1	1	NA	NA	NA	""	"FKBP15"	"FKBP15_sequences_filtered_longestORFs_mafft_mincov_prank"	"FKBP15_all"	2307	24	"0.348522026055"	"0.368"	"N"	"0.0745"	18	"197, 220, 284, 379, 529, 670, 1072, 1128, 1226, 1864, 1873, 1925, 1942, 1971, 2056, 2233, 2247, 2272"	"N"	"0.727349884676276"	0	"na"	"N"	"0.37093542957316483"	0	"na"	"N"	"0.3008931682480237"	0	"na"	"N"	"0.05442128136810543"	0	"na"	"FKBP15_sequences_filtered_longestORFs_mafft_prank"	"FKBP15"	1713	11	"0.405532667972"	"0.414"	"N"	0.7179	18	"529, 685, 729, 739, 831, 910, 1016, 1261, 1270, 1277, 1299, 1345, 1397, 1401, 1425, 1460, 1484, 1710"	"N"	"0.9925079224056861"	0	"na"	"N"	"0.7717260901757526"	0	"na"	"N"	"0.8428215734729201"	0	"na"	"N"	"0.3555817849784105"	0	"na"	""	""	"shared"
"FKBP7"	"FKBP7"	"FKBP7"	"orf8"	"FKBP7"	"list23_COV_list1orf"	"FK506 binding protein 7"	"FKBP23|PPIase"	"no"	23	669	223	0.18199	0.44825	0.0677	0.3723	0.87213	1	0.96773	1	1	1	NA	NA	NA	""	"FKBP7"	"ENSMLUG00000005816.2"	"ENSMLUT00000005820.2"	13	223	90.13452915	0.132702183	0.3392	0.90653	0.90653	-1686.218543	-1686.218553	0.99999	NA	NA	NA	""	"FKBP7"	"ENSG00000079150.17"	"ENST00000412612.1"	19	67	92.53731343	0.0657558	0.2131	0.32603	0.32604	-349.163973	-349.164088	0.999885007	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	546	182	0.17325	0.33256	0.0498	0.2874	1	1	1	1	1	1	NA	NA	NA	""	"FKBP7"	"FKBP7_sequences_filtered_longestORFs_mafft_mincov_prank"	"FKBP7_all"	391	24	"0.170022738137"	"0.178"	"N"	"0.1511"	2	"21, 369"	"N"	"0.9999977482400823"	0	"na"	"N"	"0.9838865974223817"	0	"na"	"Y"	"0.04285212686703629"	0	""	"Y"	"0.025706793075600774"	0	""	"FKBP7_sequences_filtered_longestORFs_mafft_prank"	"FKBP7"	240	12	"0.180121006561"	"0.171"	"N"	1	1	"46"	"N"	"0.9999996374315945"	0	"na"	"N"	"0.6213643144580647"	0	"na"	"N"	"0.6077449349025996"	0	"na"	"N"	"0.2265023406764399"	0	"na"	""	""	"shared"
"FOXRED2"	"FOXRED2"	"FOXRED2"	"orf8"	"FOXRED2"	"list25_COV_list3dataset2orf"	"FAD dependent oxidoreductase domain containing 2"	"ERFAD"	"no"	24	2055	685	0.14696	0.6933	0.1031	0.7014	1	1	0.94946	1	1	1	NA	NA	NA	""	"FOXRED2"	"ENSMLUG00000015845.2"	"ENSMLUT00000015850.2"	11	687	94.46870451	0.153632497	0.3489	1.27604	1.28555	-6076.886155	-6075.060307	0.16108099	NA	NA	NA	""	"FOXRED2"	"ENSG00000100350.14"	"ENST00000423980.1"	18	86	100	0.260056426	0.3509	0.76529	0.76529	-605.489707	-605.489713	0.999994	NA	NA	NA	""	"FOXRED2"	1	1	""	NA	NA	NA	""	""	1338	446	0.13198	0.34456	0.0479	0.3626	1	1	1	1	1	1	NA	NA	NA	""	"FOXRED2"	"FOXRED2_sequences_filtered_longestORFs_mafft_mincov_prank"	"FOXRED2_all"	1173	24	"0.191970360300"	"0.133"	"N"	"0.1980"	8	"79, 114, 120, 352, 427, 867, 885, 903"	"N"	"0.9999983380435137"	0	"na"	"N"	"0.06957879480939025"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.07265740261039663"	0	"na"	"FOXRED2_sequences_filtered_longestORFs_mafft_prank"	"FOXRED2"	755	12	"0.134359965249"	"0.121"	"N"	0.898	3	"87, 120, 740"	"N"	"0.9999998008388701"	0	"na"	"Y"	"0.001575189368270399"	2	"84, 700"	"N"	"0.2822392961406876"	0	"na"	"Y"	"0.0009046160123937779"	1	"700"	""	""	"shared"
"FYCO1"	"FYCO1"	"FYCO1"	"nsp13"	"FYCO1"	"list26_COV_list4dataset2nonOrf"	"FYVE and coiled-coil domain containing 1"	"CATC2|CTRCT18|RUFY3|ZFYVE7"	"yes"	24	4437	1479	0.2811	0.60832	0.1223	0.435	0.0020288	0.0229731764705882	0.00034533	0.00582421304347826	0.008976	0.10164	9.973	1.79173	4	"447_R_0.971,483_W_0.931,552_M_0.971,928_C_0.963"	"FYCO1"	"ENSMLUG00000006996.2"	"ENSMLUT00000007021.2"	4	1482	99.1902834	0.213034363	0.3531	0.61438	0.62398	-8625.1382	-8624.09648	0.352847262	NA	NA	NA	""	"FYCO1"	"ENSG00000163820.14"	"ENST00000535325.5"	18	1499	91.59439626	0.240037437	0.1681	0.56578	0.58664	-10005.83984	-9983.757336	2.57e-10	-10002.21112	1.24e-09	5	"R800, M552, P759, S974, R447"	"FYCO1"	1	1	""	NA	NA	NA	""	""	3528	1176	0.23148	0.38064	0.0706	0.305	1	1	0.82377	1	1	1	NA	NA	NA	""	"FYCO1"	"FYCO1_sequences_filtered_longestORFs_mafft_mincov_prank"	"FYCO1_all"	1663	24	"0.328824144839"	"0.235"	"Y"	"0.0013"	38	"136, 163, 278, 383, 432, 443, 494, 499, 508, 511, 573, 609, 619, 627, 653, 679, 680, 779, 818, 853, 920, 935, 970, 981, 1069, 1111, 1121, 1153, 1164, 1269, 1270, 1287, 1293, 1310, 1311, 1318, 1498, 1523"	"Y"	"0.0153341304108026"	0	""	"Y"	"0.0005174023095309059"	2	"475, 605"	"Y"	"0.0019323855559132215"	0	""	"Y"	"8.564970983330033e-08"	3	"475, 605, 981"	"FYCO1_sequences_filtered_longestORFs_mafft_prank"	"FYCO1"	1559	12	"0.200940115292"	"0.178"	"N"	1	12	"426, 548, 555, 617, 739, 838, 1100, 1119, 1143, 1288, 1337, 1491"	"N"	"0.999999143834796"	0	"na"	"Y"	"0.0015300410923087886"	2	"654, 658"	"N"	"1.0"	0	"na"	"Y"	"0.0014840209753573341"	0	""	""	""	"shared"
"G3BP1"	"G3BP1"	"G3BP1"	"N"	"G3BP1"	"list24_COV_list2nonOrf"	"G3BP stress granule assembly factor 1"	"G3BP|HDH-VIII"	"no"	22	1401	467	0.07189	0.23663	0.0159	0.2217	1	1	1	1	0.99967	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"G3BP1"	0.815160905	1	""	NA	NA	NA	""	""	1224	408	0.1046	0.16582	0.0149	0.1429	0.80507	1	1	1	0.99987	1	NA	NA	NA	""	"G3BP1"	"G3BP1_sequences_filtered_longestORFs_mafft_mincov_prank"	"G3BP1_all"	809	23	"0.116495516837"	"0.130"	"Y"	"0.0000"	2	"310, 516"	"N"	"0.9999996229940535"	0	"na"	"N"	"0.9998159116523289"	0	"na"	"N"	"1.0"	0	"na"	"N"	"1.0"	0	"na"	"G3BP1_sequences_filtered_longestORFs_mafft_prank"	"G3BP1"	627	12	"0.069912136916"	"0.076"	"N"	0.0511	1	"228"	"N"	"0.9999993102139902"	0	"na"	"Y"	"0.0024806339846634813"	3	"228, 279, 295"	"N"	"1.0"	0	"na"	"N"	"0.3649481464542307"	0	"na"	""	""	"shared"
"G3BP2"	"G3BP2"	"G3BP2"	"N"	"G3BP2"	"list24_COV_list2nonOrf"	"G3BP stress granule assembly factor 2"	"-"	"no"	24	1449	483	0.02978	0.21311	0.0077	0.2588	1	1	1	1	0.99966	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"G3BP2"	0.910244802	1	""	NA	NA	NA	""	""	1281	427	0.03932	0.16116	0.0077	0.1953	1	1	1	1	0.99981	1	NA	NA	NA	""	"G3BP2"	"G3BP2_sequences_filtered_longestORFs_mafft_mincov_prank"	"G3BP2_all"	707	24	"0.113306470399"	"0.102"	"N"	"1.0000"	0	"na"	"N"	"0.9999999799033505"	0	"na"	"N"	"0.9799314289805671"	0	"na"	"N"	"0.9990004998331715"	0	"na"	"N"	"0.9990004998331715"	0	"na"	"G3BP2_sequences_filtered_longestORFs_mafft_prank"	"G3BP2"	764	12	"0.034798575288"	"0.037"	"N"	0.0772	1	"297"	"N"	"0.9999995021181678"	0	"na"	"Y"	"0.0012394486334593303"	6	"102, 297, 321, 322, 361, 362"	"N"	"1.0"	0	"na"	"N"	"0.1439916452768443"	0	"na"	""	""	"shared"
"GCC1"	"GCC1"	"GCC1"	"nsp13"	"GCC1"	"list26_COV_list4dataset2nonOrf"	"GRIP and coiled-coil domain containing 1"	"GCC1P|GCC88"	"no"	23	2328	776	0.13435	0.47829	0.0579	0.431	0.093842	0.36131865	0.067899	0.284142554347826	0.24919	1	3.021	2.19133	1	"209_A_0.947"	"GCC1"	"ENSMLUG00000017118.2"	"ENSMLUT00000017123.2"	13	776	98.58247423	0.123138883	0.3387	1.04423	1.05336	-6797.078765	-6795.84013	0.289779497	NA	NA	NA	""	"GCC1"	"ENSG00000179562.2"	"ENST00000321407.2"	18	776	99.61340206	0.103231565	0.1821	0.43935	0.44071	-5024.601814	-5023.7418	0.423156158	NA	NA	NA	""	"GCC1"	1	1	""	NA	NA	NA	""	""	1902	634	0.15695	0.34656	0.0463	0.295	0.059002	0.372389672131148	0.091124	0.64968037037037	0.17135	1	0.651	5.63198	1	"161_A_0.942"	"GCC1"	"GCC1_sequences_filtered_longestORFs_mafft_mincov_prank"	"GCC1_all"	786	24	"0.140108711944"	"0.112"	"N"	"0.8781"	7	"136, 141, 186, 210, 243, 400, 631"	"N"	"0.9999998427856677"	0	"na"	"N"	"0.0837780362668937"	0	"na"	"N"	"0.7842715137719616"	0	"na"	"N"	"0.05948684995596509"	0	"na"	"GCC1_sequences_filtered_longestORFs_mafft_prank"	"GCC1"	777	12	"0.131322794958"	"0.116"	"N"	1	5	"122, 295, 452, 560, 773"	"N"	"0.9999986720449392"	0	"na"	"Y"	"0.004154874385133235"	3	"115, 635, 773"	"N"	"1.0"	0	"na"	"N"	"0.1115815014935742"	0	"na"	""	""	"shared"
"GCC2"	"GCC2"	"GCC2"	"nsp13"	"GCC2"	"list26_COV_list4dataset2nonOrf"	"GRIP and coiled-coil domain containing 2"	"GCC185|RANBP2L4|REN53"	"yes"	24	5070	1690	0.35761	0.53488	0.1192	0.3332	0.0010147	0.012208109375	0.0024219	0.0253382027027027	0.0038145	0.0473736290322581	0.603	8.0558	4	"103_I_0.952,610_H_0.928,801_C_0.958,1534_A_0.955"	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"GCC2"	"ENSG00000135968.20"	"ENST00000309863.10"	16	1685	91.5727003	0.246708991	0.1682	0.49914	0.50374	-10661.09777	-10659.54568	0.211803992	NA	NA	NA	""	"GCC2"	0.235479504	1	""	NA	NA	NA	""	""	4518	1506	0.39793	0.42669	0.1005	0.2527	0.002449	0.0314288333333333	0.010155	0.118475	0.079076	0.7009975	0.394	9.99215	3	"93_I_0.975,732_C_0.974,862_P_0.900"	"GCC2"	"GCC2_sequences_filtered_longestORFs_mafft_mincov_prank"	"GCC2_all"	2086	23	"0.302010959802"	"0.303"	"Y"	"0.0000"	17	"272, 484, 725, 840, 854, 962, 978, 1009, 1030, 1079, 1119, 1160, 1162, 1221, 1354, 1420, 1849"	"N"	"0.9299629112699199"	0	"na"	"Y"	"0.04692042024176004"	0	""	"Y"	"0.0003740952925822641"	0	""	"Y"	"7.257937161707046e-07"	3	"712, 989, 1887"	"GCC2_sequences_filtered_longestORFs_mafft_prank"	"GCC2"	1964	12	"0.348634040936"	"0.353"	"N"	1	10	"4, 168, 359, 572, 754, 835, 844, 1088, 1648, 1771"	"N"	"0.9999955911541166"	0	"na"	"N"	"0.9928567907992257"	0	"na"	"N"	"0.7467685359751176"	0	"na"	"N"	"0.05825065161934166"	0	"na"	""	""	"shared"
"GDF15"	"GDF15"	"GDF15"	"orf8"	"GDF15"	"list23_COV_list1orf"	"growth differentiation factor 15"	"GDF-15|MIC-1|MIC1|NAG-1|PDF|PLAB|PTGFB"	"no"	24	927	309	0.3142	0.9345	0.2073	0.6598	0.28141	0.693194936708861	0.18872	0.554079166666667	0.53676	1	NA	NA	NA	""	"GDF15"	"ENSMLUG00000002100.2"	"ENSMLUT00000002100.2"	10	317	76.34069401	0.431348518	0.3741	1.80936	1.913	-2834.255536	-2828.759219	0.004101851	-2833.271339	0.002664227	1	"R184"	"GDF15"	"ENSG00000130513.6"	"ENST00000252809.3"	16	309	99.02912621	0.472097597	0.1642	0.69182	0.71146	-2397.029019	-2396.63771	0.676171187	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	450	150	0.37175	0.45028	0.1036	0.2787	0.62699	1	0.88607	1	0.88849	1	NA	NA	NA	""	"GDF15"	"GDF15_sequences_filtered_longestORFs_mafft_mincov_prank"	"GDF15_all"	649	22	"0.428031914784"	"0.282"	"N"	"0.9834"	9	"154, 193, 240, 328, 390, 391, 395, 564, 600"	"N"	"0.9999967579508652"	0	"na"	"N"	"0.40726170973963327"	0	"na"	"N"	"1.0"	0	"na"	"Y"	"0.04183591909302521"	0	""	"GDF15_sequences_filtered_longestORFs_mafft_prank"	"GDF15"	497	10	"0.319838196439"	"0.315"	"Y"	0.0174	0	"na"	"N"	"0.9999993294002226"	0	"na"	"N"	"0.20622425783304632"	0	"na"	"N"	"0.12938018997736164"	0	"na"	"Y"	"0.002459001268223089"	0	""	""	""	"shared"
"GFER"	"GFER"	"GFER"	"nsp10"	"GFER"	"list24_COV_list2nonOrf"	"growth factor, augmenter of liver regeneration"	"ALR|ERV1|HERV1|HPO|HPO1|HPO2|HSS"	"no"	23	621	207	0.17771	0.58417	0.1039	0.5846	1	1	1	1	1	1	NA	NA	NA	""	"GFER"	"ENSMLUG00000030630.1"	"ENSMLUT00000026775.1"	13	131	77.09923664	0.088040816	0.4963	1.0421	1.04211	-885.563028	-885.56325	0.999778025	NA	NA	NA	""	"GFER"	"ENSG00000127554.12"	"ENST00000567719.1"	17	131	95.41984733	0.175267705	0.176	0.35474	0.35544	-740.439687	-739.923914	0.597038905	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	381	127	0.21278	0.3544	0.0676	0.3177	0.77182	1	0.89367	1	0.95882	1	NA	NA	NA	""	"GFER"	"GFER_sequences_filtered_longestORFs_mafft_mincov_prank"	"GFER_all"	767	23	"0.096157214611"	"0.149"	"N"	"0.4222"	3	"57, 578, 645"	"N"	"0.9999999440099161"	0	"na"	"N"	"0.22207500172338218"	0	"na"	"N"	"1.0"	0	"na"	"Y"	"0.011504695759988848"	0	""	"GFER_sequences_filtered_longestORFs_mafft_prank"	"GFER"	399	12	"0.226737253726"	"0.174"	"N"	0.0642	9	"25, 43, 51, 81, 96, 98, 100, 183, 235"	"N"	"0.999999819256589"	0	"na"	"N"	"0.9999843940257892"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.38558253897972294"	0	"na"	""	""	"shared"
"GGCX"	"GGCX"	"GGCX"	"M"	"GGCX"	"list26_COV_list4dataset2nonOrf"	"gamma-glutamyl carboxylase"	"VKCFD1"	"no"	24	2277	759	0.19063	0.35762	0.0521	0.2736	1	1	1	1	1	1	NA	NA	NA	""	"GGCX"	"ENSMLUG00000005356.2"	"ENSMLUT00000005357.2"	13	760	91.18421053	0.116117678	0.2871	0.9313	0.9313	-6053.873495	-6053.87352	0.999975	NA	NA	NA	""	"GGCX"	"ENSG00000115486.11"	"ENST00000428479.3"	14	74	91.89189189	0.260610293	0.1642	0.31857	0.31857	-406.805413	-406.805414	0.999999	NA	NA	NA	""	"GGCX"	0.546284268	1	""	NA	NA	NA	""	""	1962	654	0.16691	0.24426	0.0325	0.1948	1	1	1	1	1	1	NA	NA	NA	""	"GGCX"	"GGCX_sequences_filtered_longestORFs_mafft_mincov_prank"	"GGCX_all"	902	22	"0.141790335883"	"0.155"	"N"	"0.0608"	9	"121, 139, 480, 510, 575, 755, 803, 874, 888"	"N"	"0.9999991049293753"	0	"na"	"N"	"0.7014332238556994"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.8693582353985212"	0	"na"	"GGCX_sequences_filtered_longestORFs_mafft_prank"	"GGCX"	789	12	"0.188048507476"	"0.197"	"N"	0.3047	7	"3, 6, 44, 73, 369, 559, 602"	"N"	"0.9999999635792853"	0	"na"	"Y"	"0.0015589109782107025"	2	"3, 6"	"N"	"1.0"	0	"na"	"N"	"0.09008514502924835"	0	"na"	""	""	"shared"
"GGH"	"GGH"	"GGH"	"orf8"	"GGH"	"list25_COV_list3dataset2orf"	"gamma-glutamyl hydrolase"	"GH"	"no"	23	957	319	0.35952	0.59257	0.1323	0.368	0.67163	1	0.71223	1	0.91407	1	NA	NA	NA	""	"GGH"	"ENSMLUG00000007310.2"	"ENSMLUT00000007310.2"	5	318	94.33962264	0.387323224	0.3468	1.06811	1.10986	-2443.726561	-2440.324553	0.033306324	-2443.440181	0.012551468	1	"K255"	"GGH"	"ENSG00000137563.11"	"ENST00000260118.6"	16	319	95.61128527	0.240154466	0.1593	0.40196	0.41017	-1914.496732	-1913.879312	0.539334126	NA	NA	NA	""	"GGH"	0.000916132	0.052384308	""	NA	NA	NA	""	""	780	260	0.35526	0.42582	0.0961	0.2706	0.64927	1	0.77867	1	0.90158	1	NA	NA	NA	""	"GGH"	"GGH_sequences_filtered_longestORFs_mafft_mincov_prank"	"GGH_all"	653	24	"0.537605700623"	"0.492"	"Y"	"0.0031"	15	"154, 156, 160, 168, 214, 218, 219, 362, 369, 376, 383, 385, 435, 450, 563"	"Y"	"0.001022489106548882"	1	"326"	"Y"	"1.1351511475411773e-05"	3	"320, 326, 563"	"Y"	"0.00010266903456292367"	1	"326"	"Y"	"5.9830200464470715e-05"	6	"320, 326, 365, 375, 444, 563"	"GGH_sequences_filtered_longestORFs_mafft_prank"	"GGH"	368	12	"0.591154988946"	"0.537"	"Y"	4e-04	17	"39, 43, 59, 64, 77, 137, 190, 199, 208, 212, 214, 233, 235, 237, 251, 304, 360"	"Y"	"1.5180867978519774e-05"	2	"181, 306"	"Y"	"1.792342416742801e-07"	6	"39, 60, 181, 306, 343, 360"	"Y"	"1.6129997609789524e-07"	3	"39, 181, 306"	"Y"	"5.747015887185025e-08"	7	"39, 60, 142, 181, 306, 343, 360"	""	""	"shared"
"GHITM"	"GHITM"	"GHITM"	"orf9c"	"GHITM"	"list26_COV_list4dataset2nonOrf"	"growth hormone inducible transmembrane protein"	"DERP2|HSPC282|MICS1|My021|PTD010|TMBIM5"	"yes"	24	1053	351	0.18728	0.54082	0.0787	0.4203	0.0021802	0.0239822	0.0046	0.0431951219512195	0.015535	0.13932625	0.476	7.71826	1	"326_G_0.984"	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"GHITM"	0.094322531	0.926538721	""	NA	NA	NA	""	""	918	306	0.20065	0.40374	0.0624	0.3108	0.00028814	0.00739559333333333	0.00031764	0.00940703076923077	0.0015619	0.03885371875	0.343	11.59591	1	"283_G_0.985"	"GHITM"	"GHITM_sequences_filtered_longestORFs_mafft_mincov_prank"	"GHITM_all"	884	24	"0.335711480208"	"0.323"	"N"	"0.1357"	3	"173, 603, 778"	"Y"	"0.0011744480359077473"	1	"778"	"Y"	"1.4247727737106612e-05"	3	"610, 616, 778"	"Y"	"2.2522404244010904e-05"	3	"610, 616, 778"	"Y"	"2.8751235606937854e-07"	3	"610, 616, 778"	"GHITM_sequences_filtered_longestORFs_mafft_prank"	"GHITM"	388	12	"0.167849730148"	"0.173"	"N"	0.9976	2	"75, 82"	"N"	"0.9999967320267126"	0	"na"	"N"	"0.7529621985552206"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.8113952356431783"	0	"na"	""	""	"shared"
"GIGYF2"	"GIGYF2"	"GIGYF2"	"nsp2"	"GIGYF2"	"list26_COV_list4dataset2nonOrf"	"GRB10 interacting GYF protein 2"	"GYF2|PARK11|PERQ2|PERQ3|TNRC15"	"no"	23	4005	1335	0.10122	0.32394	0.031	0.3065	0.014778	0.0964327118644068	0.030211	0.165459097222222	0.052903	0.357327280701754	1.654	3.20825	3	"427_T_0.966,535_A_0.907,1260_P_0.912"	"GIGYF2"	"ENSMLUG00000017382.2"	"ENSMLUT00000017388.2"	6	1304	94.47852761	0.106498458	0.3672	0.48706	0.49193	-7612.081579	-7609.775133	0.099614654	NA	NA	NA	""	"GIGYF2"	"ENSG00000204120.14"	"ENST00000456491.5"	19	68	94.11764706	0.136955684	0.4564	1.17354	1.30632	-492.991734	-490.162606	0.059064335	NA	NA	NA	""	"GIGYF2"	1	1	""	NA	NA	NA	""	""	3552	1184	0.10207	0.25472	0.0247	0.242	0.31045	1	0.42863	1	0.60436	1	NA	NA	NA	""	"GIGYF2"	"GIGYF2_sequences_filtered_longestORFs_mafft_mincov_prank"	"GIGYF2_all"	1732	24	"0.088166548262"	"0.085"	"Y"	"0.0000"	7	"236, 299, 300, 305, 308, 616, 781"	"N"	"0.9427686958718544"	0	"na"	"Y"	"0.03934986707940697"	1	"673"	"Y"	"0.01862966642107099"	0	""	"Y"	"0.023777869115414657"	0	""	"GIGYF2_sequences_filtered_longestORFs_mafft_prank"	"GIGYF2"	1775	12	"0.101148943720"	"0.095"	"Y"	7e-04	8	"376, 460, 492, 751, 847, 1554, 1571, 1579"	"N"	"0.9999998979728896"	0	"na"	"N"	"0.2678306633449832"	0	"na"	"N"	"1.0"	0	"na"	"N"	"1.0"	0	"na"	""	""	"shared"
"GLA"	"GLA"	"GLA"	"nsp14"	"GLA"	"list26_COV_list4dataset2nonOrf"	"galactosidase alpha"	"GALA"	"no"	23	1290	430	0.34628	0.41456	0.0914	0.2638	0.1031	0.385373786407767	0.2231	0.622416666666667	0.26738	1	NA	NA	NA	""	"GLA"	"ENSMLUG00000004352.2"	"ENSMLUT00000004355.2"	7	432	92.36111111	0.245535203	0.2592	0.65034	0.65384	-2848.543761	-2846.725247	0.1622667	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"GLA"	0.000645969	0.039577345	"galactosidase alpha"	NA	NA	NA	""	"This gene encodes a homodimeric glycoprotein that hydrolyses the terminal alpha-galactosyl moieties from glycolipids and glycoproteins. This enzyme predominantly hydrolyzes ceramide trihexoside, and it can catalyze the hydrolysis of melibiose into galactose and glucose. A variety of mutations in this gene affect the synthesis, processing, and stability of this enzyme, which causes Fabry disease, a rare lysosomal storage disorder that results from a failure to catabolize alpha-D-galactosyl glycolipid moieties."	1122	374	0.39143	0.30398	0.0721	0.1841	1	1	1	1	0.71453	1	NA	NA	NA	""	"GLA"	"GLA_sequences_filtered_longestORFs_mafft_mincov_prank"	"GLA_all"	530	23	"0.444934110253"	"0.423"	"Y"	"0.0000"	11	"52, 90, 165, 190, 211, 212, 310, 329, 382, 454, 526"	"N"	"0.08453147942725119"	0	"na"	"Y"	"0.005149948312421734"	1	"57"	"Y"	"0.036044535783949824"	0	""	"Y"	"0.02239315381713757"	2	"57, 522"	"GLA_sequences_filtered_longestORFs_mafft_prank"	"GLA"	484	12	"0.348782356590"	"0.332"	"N"	0.1253	10	"31, 48, 188, 197, 245, 300, 307, 309, 439, 446"	"N"	"0.15476483315065273"	0	"na"	"Y"	"0.0009800253365856771"	7	"32, 48, 56, 200, 300, 446, 474"	"N"	"0.13642230780341247"	0	"na"	"N"	"0.06148266584972039"	0	"na"	""	""	"shared"
"GNB1"	"GNB1"	"GNB1"	"nsp7"	"GNB1"	"list24_COV_list2nonOrf"	"G protein subunit beta 1"	"MRD42"	"no"	23	1023	341	0.00386	0.28741	0.0014	0.3533	1	1	1	1	0.99906	1	NA	NA	NA	""	"GNB1"	"ENSMLUG00000004007.2"	"ENSMLUT00000004007.2"	7	341	89.44281525	0.019662276	1.9099	14.43006	50.40283	-2216.034824	-2213.051297	0.050614003	NA	NA	NA	""	"GNB1"	"ENSG00000078369.17"	"ENST00000615252.4"	19	241	99.17012448	0.035713833	1.7366	20.03193	20.13779	-2588.528	-2588.529064	0.998936566	NA	NA	NA	""	"GNB1"	0.993518026	1	""	NA	NA	NA	""	""	717	239	1e-04	0.08605	0	0.1138	0.99578	1	1	1	0.99949	1	NA	NA	NA	""	"GNB1"	"GNB1_sequences_filtered_longestORFs_duplication_remainingsequences_prank"	"GNB1_rem"	372	24	"0.012137123323"	"0.011"	"Y"	"0.0022"	1	"32"	"N"	"0.999999758795213"	0	"na"	"N"	"0.6414748978562623"	0	"na"	"N"	"0.9704455335487553"	0	"na"	"N"	"0.6350827332461038"	0	"na"	"GNB1_bat_select_add-2_mafft_prank"	"GNB1"	340	12	"0.00183424062126851"	"0.002"	"N"	0.9997	0	"na"	"N"	"0.999999973761533"	0	"na"	"N"	"0.999999846015283"	0	"na"	"N"	"0.997004495503217"	0	"na"	"N"	"0.997004495503217"	0	"na"	""	""	"shared"
"GNG5"	"GNG5"	"GNG5"	"nsp7"	"GNG5"	"list26_COV_list4dataset2nonOrf"	"G protein subunit gamma 5"	"-"	"no"	24	207	69	0.33712	0.49735	0.1	0.2966	0.68217	1	0.8982	1	0.91911	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"GNG5"	"ENSG00000174021.10"	"ENST00000370641.3"	19	69	81.15942029	0.540859677	0.1553	0.85314	0.89071	-462.876283	-457.698307	0.005639409	-462.703522	0.001556562	2	"R25, R18"	""	NA	NA	""	NA	NA	NA	""	""	171	57	0.40192	0.27133	0.0592	0.1472	0.10788	0.561267567567568	0.26941	1	0.27406	1	NA	NA	NA	""	"GNG5"	"GNG5_sequences_filtered_longestORFs_mafft_mincov_prank"	"GNG5_all"	601	24	"0.481274164068"	"0.532"	"Y"	"0.0002"	2	"415, 435"	"N"	"0.9999998548751242"	0	"na"	"N"	"0.9999904134392855"	0	"na"	"N"	"1.0"	0	"na"	"N"	"1.0"	0	"na"	"GNG5_sequences_filtered_longestORFs_mafft_prank"	"GNG5"	113	12	"0.326582203040"	"0.361"	"N"	0.0987	3	"54, 56, 97"	"N"	"0.9999964835763402"	0	"na"	"N"	"0.9990756526614606"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.9588697805725648"	0	"na"	"Recombination triggered by two shorter seq with diff Nter"	""	"shared"
"GOLGA2"	"GOLGA2"	"GOLGA2"	"nsp13"	"GOLGA2"	"list26_COV_list4dataset2nonOrf"	"golgin A2"	"GM130"	"no"	24	3036	1012	0.18171	0.53387	0.079	0.435	0.011706	0.081942	0.041694	0.205252530864198	0.042572	0.307836018518519	0.12	11.31463	4	"719_D_0.975,921_D_0.901,924_A_0.995,927_A_0.908"	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"GOLGA2"	1	1	""	NA	NA	NA	""	""	2382	794	0.19743	0.31479	0.0481	0.2435	0.34568	1	0.61267	1	0.63953	1	NA	NA	NA	""	"GOLGA2"	"GOLGA2_sequences_filtered_longestORFs_mafft_mincov_prank"	"GOLGA2_all"	1684	24	"0.305393987169"	"0.257"	"N"	"0.1462"	19	"23, 168, 253, 724, 790, 849, 858, 935, 1142, 1144, 1153, 1166, 1431, 1569, 1577, 1579, 1580, 1581, 1583"	"N"	"0.9999991368589777"	0	"na"	"Y"	"0.025893707763014754"	1	"1579"	"N"	"1.0"	0	"na"	"Y"	"3.682200582975814e-06"	0	""	"GOLGA2_sequences_filtered_longestORFs_mafft_prank"	"GOLGA2"	1260	12	"0.283638729032"	"0.247"	"Y"	6e-04	28	"77, 79, 125, 126, 139, 144, 148, 149, 211, 217, 224, 322, 330, 335, 364, 479, 519, 530, 534, 819, 835, 852, 960, 1027, 1153, 1185, 1198, 1206"	"N"	"0.999999815638165"	0	"na"	"N"	"0.16516295628386798"	0	"na"	"N"	"0.7565399032147061"	0	"na"	"Y"	"0.00012577700758464264"	0	""	""	""	"shared"
"GOLGA3"	"GOLGA3"	"GOLGA3"	"nsp13"	"GOLGA3"	"list26_COV_list4dataset2nonOrf"	"golgin A3"	"GCP170|MEA-2"	"no"	24	4542	1514	0.13848	0.7478	0.0997	0.7199	1	1	1	1	1	1	NA	NA	NA	""	"GOLGA3"	"ENSMLUG00000001618.2"	"ENSMLUT00000001625.2"	11	1392	95.47413793	0.179682799	0.535	1.57737	1.58271	-13303.62565	-13303.236	0.677291177	NA	NA	NA	""	"GOLGA3"	"ENSG00000090615.14"	"ENST00000450791.6"	11	1499	96.93128753	0.130669865	0.2672	0.47551	0.50725	-8871.254649	-8855.888968	2.12e-07	-8869.318424	2.19e-07	2	"K42, V43"	"GOLGA3"	0.093020573	0.918542878	""	NA	NA	NA	""	""	3216	1072	0.15255	0.3635	0.0521	0.3413	0.73337	1	0.71943	1	0.94555	1	NA	NA	NA	""	"GOLGA3"	"GOLGA3_sequences_filtered_longestORFs_mafft_mincov_prank"	"GOLGA3_all"	1900	22	"0.163723593406"	"0.147"	"Y"	"0.0000"	16	"48, 218, 235, 393, 504, 817, 820, 847, 849, 855, 861, 930, 1154, 1169, 1437, 1824"	"N"	"0.9999997475752344"	0	"na"	"N"	"0.24136126411156225"	0	"na"	"N"	"0.9990004998331715"	0	"na"	"na"	"na"	0	"na"	"GOLGA3_sequences_filtered_longestORFs_mafft_prank"	"GOLGA3"	1770	12	"0.198279547667"	"0.161"	"N"	1	18	"26, 55, 58, 85, 140, 199, 341, 684, 777, 816, 823, 847, 986, 1232, 1245, 1335, 1636, 1673"	"N"	"0.999999400046543"	0	"na"	"N"	"0.5381094011389551"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.09965909171569372"	0	"na"	""	""	"shared"
"GOLGA7"	"GOLGA7"	"GOLGA7"	"S"	"GOLGA7"	"list26_COV_list4dataset2nonOrf"	"golgin A7"	"GCP16|GOLGA3AP1|GOLGA7A|HSPC041"	"no"	24	414	138	1e-04	0.26083	0	0.306	1	1	1	1	0.99936	1	NA	NA	NA	""	"GOLGA7"	"ENSMLUG00000014516.2"	"ENSMLUT00000014518.2"	10	138	86.95652174	0.088463359	3.6554	3.39644	3.39646	-1178.46202	-1178.462175	0.999845012	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	345	115	1e-04	0.15139	0	0.1592	0.99593	1	1	1	0.9997	1	NA	NA	NA	""	"GOLGA7"	"GOLGA7_sequences_filtered_longestORFs_mafft_mincov_prank_part1_prank"	"GOLGA7_all_part1"	183	24	"0.156756002379"	"0.147"	"Y"	"0.0000"	3	"108, 110, 126"	"Y"	"0.00022950324671518768"	1	"126"	"Y"	"1.926716958405556e-07"	1	"126"	"Y"	"1.1467426728354779e-05"	1	"126"	"Y"	"1.4006346635015994e-05"	2	"105, 126"	"GOLGA7_bat_select_mafft_prank"	"GOLGA7"	149	12	"0.220573583150933"	"0.207"	"Y"	0	0	"na"	"Y"	"2.70705925441226e-07"	1	"123"	"Y"	"1.75104775190395e-09"	1	"123"	"Y"	"9.285332670143659e-11"	1	"123"	"Y"	"2.0005777681870837e-11"	1	"123"	""	""	"shared"
"GOLGB1"	"GOLGB1"	"GOLGB1"	"nsp13"	"GOLGB1"	"list26_COV_list4dataset2nonOrf"	"golgin B1"	"GCP|GCP372|GOLIM1"	"yes"	24	9864	3288	0.43109	0.4171	0.1004	0.233	0.00010068	0.00207717631578947	0.00034794	0.00582421304347826	0.00054429	0.0110430157894737	4.229	3.42197	8	"1135_A_0.961,1236_R_0.978,1268_R_0.945,1558_I_0.955,1851_V_0.923,2171_C_0.920,2893_V_0.923,3110_L_0.912"	"GOLGB1"	"ENSMLUG00000024533.1"	"ENSMLUT00000026933.1"	5	3261	96.933456	0.221399945	0.2943	0.62767	0.63352	-21442.66525	-21438.93963	0.024098107	-21442.48654	0.007734994	1	"S630"	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"GOLGB1"	0.511064965	1	""	NA	NA	NA	""	""	9084	3028	0.42266	0.34099	0.0816	0.1932	0.17169	0.796393373493976	0.28226	1	0.36153	1	NA	NA	NA	""	"GOLGB1"	"GOLGB1_sequences_filtered_longestORFs_mafft_mincov_prank"	"GOLGB1_all"	3732	24	"0.378204440309"	"0.407"	"N"	"0.0796"	43	"83, 140, 142, 154, 159, 185, 590, 608, 643, 743, 763, 987, 1050, 1063, 1226, 1271, 1279, 1326, 1337, 1411, 1471, 1529, 1561, 1578, 1582, 1613, 1616, 1728, 1784, 1785, 1787, 1851, 1852, 1971, 2194, 2700, 2728, 2881, 2963, 3101, 3314, 3593, 3694"	"Y"	"0.04586809391212947"	0	""	"Y"	"0.0001008144633452632"	0	""	"Y"	"2.6360084887481196e-09"	2	"2464, 3105"	"na"	"na"	0	"na"	"GOLGB1_sequences_filtered_longestORFs_mafft_prank"	"GOLGB1"	3379	12	"0.358672957821"	"0.382"	"N"	0.6564	0	"na"	"N"	"0.9999982494643379"	0	"na"	"N"	"0.9977185838627639"	0	"na"	"Y"	"0.012765615648940824"	0	""	"Y"	"0.00020903685120196526"	1	"1864"	""	""	"shared"
"GORASP1"	"GORASP1"	"GORASP1"	"nsp13"	"GORASP1"	"list26_COV_list4dataset2nonOrf"	"golgi reassembly stacking protein 1"	"GOLPH5|GRASP65|P65"	"yes"	24	1368	456	0.35746	0.53431	0.1154	0.3228	0.0022912	0.0245031111111111	0.0081688	0.0683693043478261	0.0092707	0.1019777	0.546	10.57822	1	"433_A_0.992"	"GORASP1"	"ENSMLUG00000005614.2"	"ENSMLUT00000005615.2"	3	431	90.9512761	0.323245913	0.1242	0.21174	0.37361	-1964.392034	-1961.6331	0.063359273	NA	NA	NA	""	"GORASP1"	"ENSG00000114745.13"	"ENST00000441081.1"	16	88	100	0.012315818	0.2482	0.35432	0.35435	-461.526226	-461.526882	0.999344215	NA	NA	NA	""	"GORASP1"	1	1	""	NA	NA	NA	""	""	1074	358	0.46396	0.39956	0.0986	0.2124	0.00062917	0.01212255	0.0028925	0.05061875	0.0028065	0.0568685526315789	0.449	16.05395	2	"186_H_0.921,338_A_0.998"	"GORASP1"	"GORASP1_sequences_filtered_longestORFs_mafft_mincov_prank"	"GORASP1_all"	1939	24	"0.387956217637"	"0.379"	"N"	"0.1831"	15	"816, 831, 1292, 1417, 1451, 1487, 1526, 1527, 1639, 1695, 1735, 1740, 1749, 1754, 1756"	"N"	"0.10802784002302251"	0	"na"	"Y"	"0.04870295760413275"	1	"1740"	"Y"	"0.012919725848616241"	0	""	"Y"	"0.006984932149948331"	2	"1740, 1756"	"GORASP1_sequences_filtered_longestORFs_mafft_prank"	"GORASP1"	812	11	"0.313024592727"	"0.279"	"N"	0.8267	5	"196, 462, 553, 599, 615"	"N"	"0.7718451596308276"	0	"na"	"N"	"0.28935504135190926"	0	"na"	"N"	"0.29258501645347795"	0	"na"	"N"	"0.07715028546888042"	0	"na"	""	""	"shared"
"GPAA1"	"GPAA1"	"GPAA1"	"orf9c"	"GPAA1"	"list26_COV_list4dataset2nonOrf"	"glycosylphosphatidylinositol anchor attachment 1"	"GAA1|GPIBD15|hGAA1"	"no"	23	1866	622	0.07715	0.59115	0.048	0.6227	0.81654	1	0.29339	0.728742903225806	0.97893	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"GPAA1"	0.943023482	1	""	NA	NA	NA	""	""	1269	423	0.09819	0.34051	0.0325	0.3305	0.014814	0.14258475	0.051345	0.439285	0.11556	0.946608510638298	0.999	4.72883	1	"256_A_0.961"	"GPAA1"	"GPAA1_sequences_filtered_longestORFs_mafft_mincov_prank"	"GPAA1_all"	1454	24	"0.090726390872"	"0.091"	"N"	"0.9826"	5	"85, 376, 442, 613, 1139"	"N"	"0.9999997631266805"	0	"na"	"N"	"0.3059381800239461"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.16999266328690485"	0	"na"	"GPAA1_sequences_filtered_longestORFs_mafft_prank"	"GPAA1"	725	11	"0.079230590578"	"0.076"	"N"	0.8016	2	"389, 642"	"N"	"0.9999999804449546"	0	"na"	"Y"	"0.008941563540158914"	2	"384, 642"	"N"	"1.0"	0	"na"	"Y"	"0.00018632837199053192"	2	"384, 642"	""	""	"shared"
"GPX1"	"GPX1"	"GPX1"	"nsp5_C145A"	"GPX1"	"list24_COV_list2nonOrf"	"glutathione peroxidase 1"	"GPXD|GSHPX1"	"no"	27	615	205	0.10057	0.68151	0.0776	0.7714	1	1	0.92503	1	1	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	348	116	0.09159	0.47798	0.0475	0.5191	1	1	1	1	1	1	NA	NA	NA	""	"GPX1"	"GPX1_sequences_filtered_longestORFs_mafft_mincov_prank"	"GPX1_all"	982	27	"0.220387050417"	"0.220"	"Y"	"0.0000"	12	"351, 366, 410, 415, 434, 577, 650, 667, 730, 733, 750, 774"	"N"	"0.9999996748506947"	0	"na"	"N"	"0.9999866177422099"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.2639488353791985"	0	"na"	"GPX1_sequences_filtered_longestORFs_D150gp2_prank"	"GPX1_150-2"	258	8	"0.167942454881"	"0.134"	"N"	1	0	"na"	"N"	"0.9999995266942944"	0	"na"	"N"	"0.9999786426592591"	0	"na"	"N"	"1.0"	0	"na"	"N"	"1.0"	0	"na"	"Yes duplication, not perfect groups but ok"	""	"shared"
"GRIPAP1"	"GRIPAP1"	"GRIPAP1"	"nsp13"	"GRIPAP1"	"list26_COV_list4dataset2nonOrf"	"GRIP1 associated protein 1"	"GRASP-1"	"no"	23	2526	842	0.1096	0.26692	0.0276	0.2519	0.31279	0.747976086956522	0.60659	1	0.6663	1	NA	NA	NA	""	"GRIPAP1"	"ENSMLUG00000009232.2"	"ENSMLUT00000009258.2"	12	842	93.46793349	0.107890943	0.3829	1.18978	1.19909	-7203.55603	-7202.940685	0.540454406	NA	NA	NA	""	"GRIPAP1"	"ENSG00000068400.13"	"ENST00000611705.4"	19	23	100	NA	0.0779	0.04538	0.04538	-87.183363	-87.183391	0.999972	NA	NA	NA	""	"GRIPAP1"	0.128417261	1	""	NA	NA	NA	""	""	2139	713	0.09263	0.19315	0.017	0.1832	0.37347	1	0.6956	1	0.72285	1	NA	NA	NA	""	"GRIPAP1"	"GRIPAP1_sequences_filtered_longestORFs_mafft_mincov_prank"	"GRIPAP1_all"	1711	22	"0.137449468005"	"0.104"	"N"	"0.9914"	5	"366, 467, 473, 949, 1597"	"N"	"0.9971162888884593"	0	"na"	"Y"	"0.0010441129923277768"	17	"101, 206, 218, 226, 259, 260, 263, 273, 278, 452, 461, 539, 709, 714, 720, 735, 925"	"N"	"0.12135926503896373"	0	"na"	"N"	"0.054530232846024596"	0	"na"	"GRIPAP1_sequences_filtered_longestORFs_mafft_prank"	"GRIPAP1"	1409	12	"0.146610466542"	"0.131"	"N"	0.8681	6	"299, 305, 396, 397, 744, 902"	"N"	"0.9712566374068777"	0	"na"	"Y"	"0.00014917901856823743"	6	"73, 288, 297, 299, 305, 520"	"Y"	"0.04411303332245541"	0	""	"Y"	"0.0009509966671486873"	5	"288, 297, 299, 305, 520"	"yes PS"	""	"shared"
"GRPEL1"	"GRPEL1"	"GRPEL1"	"nsp10"	"GRPEL1"	"list24_COV_list2nonOrf"	"GrpE like 1, mitochondrial"	"GrpE|HMGE|mt-GrpE#1"	"no"	22	654	218	0.08526	0.5483	0.0504	0.5915	1	1	1	1	1	1	NA	NA	NA	""	"GRPEL1"	"ENSMLUG00000008977.2"	"ENSMLUT00000008979.2"	9	220	80	0.14925679	0.525	1.41536	1.54259	-1577.493821	-1574.733486	0.063270569	NA	NA	NA	""	"GRPEL1"	"ENSG00000109519.12"	"ENST00000264954.4"	18	218	94.03669725	0.080541871	0.254	0.53586	0.53586	-1427.756159	-1427.756167	0.999992	NA	NA	NA	""	"GRPEL1"	0.627530857	1	""	NA	NA	NA	""	""	489	163	0.07023	0.3454	0.0281	0.3999	0.36343	1	0.5754	1	0.6579	1	NA	NA	NA	""	"GRPEL1"	"GRPEL1_sequences_filtered_longestORFs_mafft_mincov_prank"	"GRPEL1_all"	240	24	"0.086719113802"	"0.087"	"N"	"1.0000"	1	"91"	"N"	"0.9999995135173141"	0	"na"	"N"	"0.2577892912415277"	0	"na"	"N"	"1.0"	0	"na"	"N"	"1.0"	0	"na"	"GRPEL1_sequences_filtered_longestORFs_mafft_prank"	"GRPEL1"	387	12	"0.153021798728"	"0.141"	"Y"	0	2	"334, 380"	"N"	"0.9999989885773742"	0	"na"	"Y"	"0.02362956206208953"	2	"334, 380"	"N"	"0.2059750982048984"	0	"na"	"Y"	"0.011631946006600644"	1	"380"	"yes PS"	""	"shared"
"GTF2F2"	"GTF2F2"	"GTF2F2"	"nsp9"	"GTF2F2"	"list24_COV_list2nonOrf"	"general transcription factor IIF subunit 2"	"BTF4|RAP30|TF2F2|TFIIF"	"no"	24	750	250	0.02445	0.33417	0.0094	0.3845	1	1	1	1	1	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"GTF2F2"	1	1	""	NA	NA	NA	""	""	636	212	0.03639	0.2466	0.0108	0.2963	1	1	1	1	1	1	NA	NA	NA	""	"GTF2F2"	"GTF2F2_sequences_filtered_longestORFs_mafft_mincov_prank"	"GTF2F2_all"	520	24	"0.063909796339"	"0.061"	"N"	"1.0000"	0	"na"	"N"	"0.9999999905733148"	0	"na"	"N"	"0.9999741529398143"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.9980019986673803"	0	"na"	"GTF2F2_sequences_filtered_longestORFs_mafft_prank"	"GTF2F2"	368	12	"0.052374130123"	"0.046"	"N"	1	0	"na"	"N"	"0.9999989068598161"	0	"na"	"N"	"0.9954021165346404"	0	"na"	"N"	"0.9990004998331715"	0	"na"	"N"	"0.9990004998336257"	0	"na"	""	""	"shared"
"HDAC2"	"HDAC2"	"HDAC2"	"nsp5"	"HDAC2"	"list26_COV_list4dataset2nonOrf"	"histone deacetylase 2"	"HD2|RPD3|YAF1"	"no"	24	1470	490	0.01067	0.25079	0.0039	0.3623	1	1	0.34431	0.804883333333333	1	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"HDAC2"	"ENSG00000196591.11"	"ENST00000524334.1"	6	52	100	0.043758984	0.1375	5.36638	5.36721	-304.260393	-304.260649	0.999744033	NA	NA	NA	""	"HDAC2"	1	1	""	NA	NA	NA	""	""	1281	427	0.01705	0.17663	0.0044	0.259	0.9174	1	0.37419	1	0.99455	1	NA	NA	NA	""	"HDAC2"	"HDAC2_sequences_filtered_longestORFs_D584gp1_prank"	"HDAC2_584-1"	792	22	"0.072625220245"	"0.069"	"Y"	"0.0212"	3	"195, 529, 679"	"N"	"0.9999999633500927"	0	"na"	"N"	"0.9997173382334857"	0	"na"	"Y"	"0.02100489023574836"	0	""	"Y"	"0.005976022895006596"	0	""	"HDAC2_sequences_filtered_longestORFs_D132gp2_prank"	"HDAC2_132-2"	545	10	"0.065456573033"	"0.056"	"N"	0.916	2	"134, 351"	"N"	"0.9999973836886631"	0	"na"	"N"	"0.2806779038483537"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.9464851479532084"	0	"na"	"Yes for duplication, only lost 2 species in another group"	""	"shared"
"HEATR3"	"HEATR3"	"HEATR3"	"orf7a"	"HEATR3"	"list25_COV_list3dataset2orf"	"HEAT repeat containing 3"	"SYO1"	"no"	24	2055	685	0.19063	0.47473	0.0711	0.3728	1	1	1	1	0.99916	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"HEATR3"	"ENSG00000155393.12"	"ENST00000299192.7"	14	681	98.97209985	0.129618084	0.1751	0.33356	0.33357	-4068.040378	-4068.040482	0.999896005	NA	NA	NA	""	"HEATR3"	0.495183326	1	""	NA	NA	NA	""	""	1665	555	0.23887	0.3332	0.0585	0.2448	1	1	1	1	0.86287	1	NA	NA	NA	""	"HEATR3"	"HEATR3_sequences_filtered_longestORFs_mafft_mincov_prank"	"HEATR3_all"	1645	22	"0.180463336537"	"0.180"	"N"	"0.5376"	3	"531, 582, 626"	"N"	"0.9999979553042962"	0	"na"	"N"	"0.9996892022780154"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.9960079893431798"	0	"na"	"HEATR3_sequences_filtered_longestORFs_mafft_prank"	"HEATR3"	842	12	"0.158810119780"	"0.175"	"Y"	0	6	"21, 128, 224, 689, 691, 781"	"N"	"0.9999991490643861"	0	"na"	"N"	"0.3385670045597787"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.5168513344917745"	0	"na"	"surprised not under PS, but aln is good"	""	"shared"
"HECTD1"	"HECTD1"	"HECTD1"	"nsp8"	"HECTD1"	"list24_COV_list2nonOrf"	"HECT domain E3 ubiquitin protein ligase 1"	"EULIR"	"no"	22	7833	2611	0.01563	0.18765	0.0036	0.2333	1	1	1	1	0.99988	1	NA	NA	NA	""	"HECTD1"	"ENSMLUG00000013003.2"	"ENSMLUT00000013007.2"	9	2611	97.05093834	0.01987373	0.187	0.37051	0.3705	-14548.28543	-14548.279	0.993590628	NA	NA	NA	""	"HECTD1"	"ENSG00000092148.12"	"ENST00000611816.4"	12	2615	99.88527725	0.062418501	0.0473	0.09215	0.09008	-12010.3272	-11985.79417	2.22e-11	-12002.43351	7.99e-09	1	"G945"	"HECTD1"	0.907809819	1	""	NA	NA	NA	""	""	7056	2352	0.02104	0.13241	0.0035	0.1645	1	1	0.99819	1	1	1	NA	NA	NA	""	"HECTD1"	"HECTD1_sequences_filtered_longestORFs_mafft_mincov_prank"	"HECTD1_all"	2939	24	"0.021094262608"	"0.019"	"Y"	"0.0001"	4	"684, 1404, 1879, 2028"	"Y"	"0.008901674998077978"	1	"1879"	"Y"	"3.7920189419444137e-11"	2	"1879, 2188"	"Y"	"0.01608287882263056"	0	""	"Y"	"3.2223008399506914e-07"	1	"1879"	"HECTD1_sequences_filtered_longestORFs_mafft_prank"	"HECTD1"	2748	11	"0.018804604118"	"0.017"	"N"	1	2	"1642, 1647"	"N"	"0.14299421412322735"	0	"na"	"Y"	"4.6782268893524087e-07"	1	"1647"	"N"	"0.3266062376117585"	0	"na"	"Y"	"0.00015118595329833632"	1	"1647"	""	""	"shared"
"HMOX1"	"HMOX1"	"HMOX1"	"orf3a"	"HMOX1"	"list23_COV_list1orf"	"heme oxygenase 1"	"HMOX1D|HO-1|HSP32|bK286B10"	"no"	24	867	289	0.17957	0.66242	0.1133	0.6311	1	1	0.84428	1	1	1	NA	NA	NA	""	"HMOX1"	"ENSMLUG00000008815.2"	"ENSMLUT00000008807.2"	12	285	81.75438596	0.23859892	0.3776	1.60867	1.66099	-2454.648823	-2452.499544	0.116568173	NA	NA	NA	""	"HMOX1"	"ENSG00000100292.16"	"ENST00000216117.8"	18	289	91.69550173	0.26105194	0.1867	0.70724	0.71221	-2045.708694	-2045.643886	0.937247398	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	630	210	0.22543	0.28407	0.0546	0.2423	0.57248	1	0.84928	1	0.85275	1	NA	NA	NA	""	"HMOX1"	"HMOX1_sequences_filtered_longestORFs_mafft_mincov_prank"	"HMOX1_all"	496	24	"0.251296084380"	"0.171"	"Y"	"0.0011"	9	"41, 111, 113, 208, 215, 314, 327, 399, 402"	"N"	"0.9999996541487833"	0	"na"	"N"	"0.9999864280441805"	0	"na"	"N"	"1.0"	0	"na"	"N"	"1.0"	0	"na"	"HMOX1_sequences_filtered_longestORFs_mafft_prank"	"HMOX1"	314	12	"0.169891781425"	"0.147"	"Y"	0.0019	5	"100, 197, 229, 240, 268"	"N"	"0.9999980288149674"	0	"na"	"N"	"0.6946305916846283"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.8402968976584497"	0	"na"	""	""	"shared"
"HOOK1"	"HOOK1"	"HOOK1"	"nsp13"	"HOOK1"	"list26_COV_list4dataset2nonOrf"	"hook microtubule tethering protein 1"	"HK1"	"no"	24	2193	731	0.10862	0.31513	0.0322	0.2964	1	1	1	1	1	1	NA	NA	NA	""	"HOOK1"	"ENSMLUG00000015536.2"	"ENSMLUT00000015546.2"	11	730	93.69863014	0.063317564	0.2519	0.58065	0.58158	-4668.362609	-4667.393128	0.379279833	NA	NA	NA	""	"HOOK1"	"ENSG00000134709.10"	"ENST00000371208.3"	17	729	95.61042524	0.088870594	0.1255	0.25743	0.25743	-3874.124599	-3874.124612	0.999987	NA	NA	NA	""	"HOOK1"	0.502954854	1	""	NA	NA	NA	""	""	1944	648	0.15747	0.22947	0.0303	0.1925	0.86968	1	1	1	1	1	NA	NA	NA	""	"HOOK1"	"HOOK1_sequences_filtered_longestORFs_mafft_mincov_prank"	"HOOK1_all"	901	24	"0.099574669625"	"0.100"	"N"	"0.6019"	1	"391"	"N"	"0.9999996985362031"	0	"na"	"N"	"0.12807058131492954"	0	"na"	"N"	"0.9990004998331715"	0	"na"	"N"	"1.0"	0	"na"	"HOOK1_sequences_filtered_longestORFs_mafft_prank"	"HOOK1"	884	12	"0.092760665115"	"0.086"	"N"	0.0686	1	"471"	"N"	"0.9999989485682889"	0	"na"	"N"	"0.10257076456806259"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.42912801555982616"	0	"na"	""	""	"shared"
"HS2ST1"	"HS2ST1"	"HS2ST1"	"nsp7"	"HS2ST1"	"list26_COV_list4dataset2nonOrf"	"heparan sulfate 2-O-sulfotransferase 1"	"dJ604K5.2"	"no"	24	1071	357	0.06867	0.18426	0.013	0.1888	1	1	1	1	1	1	NA	NA	NA	""	"HS2ST1"	"ENSMLUG00000030087.1"	"ENSMLUT00000023452.1"	11	316	99.05063291	0.016449146	0.5151	0.7068	0.70682	-2111.210982	-2111.212841	0.998142727	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"HS2ST1"	0.998871621	1	""	NA	NA	NA	""	""	927	309	0.06724	0.1107	0.0076	0.1127	1	1	1	1	0.99994	1	NA	NA	NA	""	"HS2ST1"	"HS2ST1_sequences_filtered_longestORFs_mafft_mincov_prank"	"HS2ST1_all"	467	24	"0.049526435418"	"0.047"	"N"	"0.8304"	0	"na"	"N"	"0.7669728060811652"	0	"na"	"N"	"0.21629317355740055"	0	"na"	"N"	"0.7945336025033196"	0	"na"	"N"	"0.32791527889951105"	0	"na"	"HS2ST1_sequences_filtered_longestORFs_mafft_prank"	"HS2ST1"	460	12	"0.031896401046"	"0.030"	"Y"	0.0201	1	"92"	"N"	"0.9999989824287415"	0	"na"	"Y"	"0.04683669540407693"	1	"154"	"N"	"0.8504412045400103"	0	"na"	"N"	"0.5786832586839825"	0	"na"	""	""	"shared"
"HS6ST2"	"HS6ST2"	"HS6ST2"	"orf8"	"HS6ST2"	"list25_COV_list3dataset2orf"	"heparan sulfate 6-O-sulfotransferase 2"	"-"	"no"	23	1968	656	0.2307	0.37771	0.0714	0.3093	0.19239	0.561057894736842	0.18112	0.540551937984496	0.43537	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"HS6ST2"	"ENSG00000171004.18"	"ENST00000640529.1"	16	277	97.47292419	0.116525036	0.1978	0.3608	0.36564	-1627.124599	-1626.17383	0.386443734	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	1383	461	0.19763	0.22521	0.0384	0.1943	1	1	1	1	1	1	NA	NA	NA	""	"HS6ST2"	"HS6ST2_sequences_filtered_longestORFs_mafft_mincov_prank_part1_prank"	"HS6ST2_all_part1"	813	24	"0.270519011833"	"0.221"	"N"	"1.0000"	7	"139, 141, 418, 656, 708, 711, 724"	"Y"	"0.02429023356039424"	1	"418"	"Y"	"0.0051018881067389854"	1	"418"	"N"	"0.05393368730035209"	0	"na"	"Y"	"0.010041788933126234"	1	"418"	"HS6ST2_sequences_filtered_longestORFs_mafft_prank"	"HS6ST2"	815	9	"0.122994671159"	"0.120"	"N"	1	3	"280, 434, 474"	"N"	"0.9999994672208741"	0	"na"	"N"	"0.8009033507567138"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.14926978092209653"	0	"na"	"ok, One seq is gene 3"	""	"shared"
"HSBP1"	"HSBP1"	"HSBP1"	"nsp13"	"HSBP1"	"list26_COV_list4dataset2nonOrf"	"heat shock factor binding protein 1"	"NPC-A-13"	"no"	24	231	77	0.01253	0.3452	0.0058	0.4602	1	1	1	1	1	1	NA	NA	NA	""	"HSBP1"	"ENSMLUG00000007636.2"	"ENSMLUT00000007621.2"	9	76	84.21052632	0.469211898	0.4944	2.74941	2.74944	-833.964215	-833.964329	0.999886006	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	189	63	1e-04	0.26772	0	0.3778	0.99549	1	1	1	0.99966	1	NA	NA	NA	""	"HSBP1"	"HSBP1_sequences_filtered_longestORFs_mafft_mincov_prank"	"HSBP1_all"	795	24	"0.362897817634"	"0.408"	"N"	"0.0610"	2	"592, 661"	"N"	"0.78798694179292"	0	"na"	"N"	"0.0894389251807912"	0	"na"	"N"	"0.195929574126888"	0	"na"	"Y"	"0.019139519457233287"	0	""	"HSBP1_bat-select_mafft_prank"	"HSBP1"	110	12	"0.154122572218507"	"0.152"	"N"	1	0	"na"	"N"	"0.999999994110794"	0	"na"	"N"	"0.999980539121756"	0	"na"	"N"	"0.9990004998333987"	0	"na"	"N"	"1.0"	0	"na"	""	""	"shared"
"HYOU1"	"HYOU1"	"HYOU1"	"orf8"	"HYOU1"	"list23_COV_list1orf"	"hypoxia up-regulated 1"	"GRP-170|Grp170|HSP12A|ORP-150|ORP150"	"no"	22	3006	1002	0.1235	0.40065	0.0432	0.3499	0.26918	0.68064477124183	0.25408	0.669561824324324	0.5498	1	NA	NA	NA	""	"HYOU1"	"ENSMLUG00000004772.2"	"ENSMLUT00000004783.2"	3	998	99.3987976	0.110361074	0.0477	0.05613	0.05613	-4245.112732	-4245.112758	0.999974	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"HYOU1"	1	1	""	NA	NA	NA	""	""	2415	805	0.16411	0.24702	0.0334	0.2035	0.99126	1	1	1	1	1	NA	NA	NA	""	"HYOU1"	"HYOU1_sequences_filtered_longestORFs_mafft_mincov_prank"	"HYOU1_all"	1337	24	"0.158524063377"	"0.136"	"Y"	"0.0014"	15	"139, 165, 201, 393, 553, 554, 563, 665, 798, 801, 803, 833, 850, 863, 1277"	"N"	"0.9999990131896406"	0	"na"	"N"	"0.859796205836504"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.9990004998331715"	0	"na"	"HYOU1_sequences_filtered_longestORFs_mafft_prank"	"HYOU1"	1034	12	"0.186537649602"	"0.170"	"N"	1	4	"683, 971, 993, 1024"	"N"	"0.9999995483232053"	0	"na"	"Y"	"0.0329969447075339"	1	"993"	"N"	"1.0"	0	"na"	"Y"	"0.031054858792339112"	0	""	""	""	"shared"
"IDE"	"IDE"	"IDE"	"nsp4"	"IDE"	"list24_COV_list2nonOrf"	"insulin degrading enzyme"	"INSULYSIN"	"no"	24	3060	1020	0.11029	0.28343	0.0298	0.2705	0.59121	1	0.62883	1	0.86566	1	NA	NA	NA	""	"IDE"	"ENSMLUG00000009510.2"	"ENSMLUT00000009538.2"	11	990	99.6969697	0.040802575	0.228	0.48692	0.48692	-6281.329159	-6281.329227	0.999932002	NA	NA	NA	""	"IDE"	"ENSG00000119912.15"	"ENST00000371581.9"	19	465	98.70967742	0.062270064	0.1261	0.29865	0.29466	-2629.337266	-2626.242243	0.045273971	-2629.027972	0.018255554	NA	""	"IDE"	1	1	""	NA	NA	NA	""	""	2760	920	0.12071	0.21574	0.0245	0.2033	0.16439	0.771831097560976	0.29376	1	0.38037	1	NA	NA	NA	""	"IDE"	"IDE_sequences_filtered_longestORFs_mafft_mincov_prank"	"IDE_all"	1445	24	"0.090773344200"	"0.089"	"Y"	"0.0000"	10	"139, 151, 705, 792, 794, 807, 808, 872, 876, 878"	"Y"	"5.232216490035662e-41"	3	"872, 876, 878"	"Y"	"2.4701413764351294e-66"	3	"872, 876, 878"	"Y"	"5.975956040153828e-44"	3	"872, 876, 878"	"na"	"na"	0	"na"	"IDE_sequences_filtered_longestORFs_mafft_prank"	"IDE"	1637	12	"0.095078927531"	"0.098"	"Y"	0	6	"158, 206, 996, 1000, 1002, 1583"	"Y"	"1.1435776810227844e-27"	1	"1000"	"Y"	"2.952064946346253e-41"	3	"996, 1000, 1002"	"Y"	"8.372002990590578e-34"	3	"996, 1000, 1002"	"na"	"na"	0	"na"	"Recombination: Not surprising given the aln. And it makes sense. PRANK aln from DGINN very different from the one with Muscle that is super conservative. Mostly due to splicing variants with some very cool domains that change within a species. This is what brings the recombination marks. 
Lots of splicing variants within and between species: at Nter and middle too. 
- PS: PS per se does not look much present.
But Genetic Innovation by splicing variants YES.
"	""	"shared"
"IL17RA"	"IL17RA"	"IL17RA"	"orf8"	"IL17RA"	"list25_COV_list3dataset2orf"	"interleukin 17 receptor A"	"CANDF5|CD217|CDw217|IL-17RA|IL17R|IMD51|hIL-17R"	"no"	24	2604	868	0.17786	0.9775	0.1649	0.9269	1	1	0.071071	0.286905208333333	1	1	7.642	1	0	"noneOver_0.9"	"IL17RA"	"ENSMLUG00000003654.2"	"ENSMLUT00000003658.2"	8	810	89.01234568	0.28793215	0.4154	1.05462	1.09076	-5965.067892	-5961.704246	0.034608845	-5963.535414	0.055655549	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	1575	525	0.16855	0.55537	0.0919	0.5452	0.20625	0.90234375	0.070016	0.544313	0.44919	1	1.58	2.25443	0	"noneOver_0.9"	"IL17RA"	"IL17RA_sequences_filtered_longestORFs_mafft_mincov_prank"	"IL17RA_all"	1557	23	"0.228451784188"	"0.195"	"N"	"0.1417"	143	"423, 427, 433, 435, 445, 446, 451, 460, 468, 533, 545, 546, 548, 554, 561, 562, 573, 588, 594, 595, 597, 621, 647, 651, 654, 655, 664, 665, 666, 671, 673, 678, 682, 687, 689, 698, 699, 702, 708, 714, 716, 718, 727, 728, 731, 735, 738, 742, 745, 933, 938, 949, 955, 956, 979, 981, 994, 1000, 1021, 1022, 1027, 1028, 1029, 1030, 1031, 1032, 1035, 1040, 1054, 1061, 1066, 1076, 1078, 1131, 1089, 1092, 1105, 1116, 1119, 1129, 1132, 1136, 1138, 1145, 1148, 1170, 1177, 1179, 1187, 1215, 1218, 1229, 1243, 1244, 1247, 1248, 1251, 1255, 1272, 1276, 1282, 1292, 1293, 1295, 1302, 1317, 1322, 1332, 1334, 1339, 1359, 1370, 1373, 1374, 1377, 1379, 1382, 1384, 1392, 1402, 1403, 1405, 1411, 1414, 1416, 1424, 1432, 1439, 1462, 1465, 1471, 1491, 1494, 1508, 1527, 1531, 1535, 1536, 1538, 1541, 1542, 1548, 1553"	"N"	"0.9999996922743339"	0	"na"	"N"	"0.3768769266449034"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.11706803704428821"	0	"na"	"IL17RA_sequences_filtered_longestORFs_mafft_prank"	"IL17RA"	1140	12	"0.387082487423"	"0.291"	"Y"	0.0017	21	"112, 225, 227, 229, 280, 298, 324, 329, 343, 447, 470, 574, 852, 878, 905, 915, 917, 927, 935, 946, 1024"	"N"	"0.9999996775405244"	0	"na"	"N"	"0.6967350668837281"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.0725122330231234"	0	"na"	""	""	"shared"
"IMPDH2"	"IMPDH2"	"IMPDH2"	"nsp14"	"IMPDH2"	"list24_COV_list2nonOrf"	"inosine monophosphate dehydrogenase 2"	"IMPD2|IMPDH-II"	"no"	24	1545	515	0.02179	0.27103	0.0065	0.2968	1	1	1	1	0.99936	1	NA	NA	NA	""	"IMPDH2"	"ENSMLUG00000013965.2"	"ENSMLUT00000013972.2"	14	515	86.21359223	0.012416405	0.4874	50.93829	50.93616	-4963.051792	-4959.072943	0.018707159	-4958.897176	0.553246052	NA	""	"IMPDH2"	"ENSG00000178035.11"	"ENST00000442157.1"	15	279	99.28315412	0.345543694	1.5521	3.80863	3.96597	-3207.035275	-3203.3997	0.026368768	-3203.996416	0.274638373	NA	""	"IMPDH2"	0.993717516	1	""	NA	NA	NA	""	""	1293	431	0.03891	0.1682	0.0067	0.1732	1	1	1	1	0.99982	1	NA	NA	NA	""	"IMPDH2"	"IMPDH2_sequences_filtered_longestORFs_D906gp1_prank"	"IMPDH2_906-1"	1560	24	"0.035412844051"	"0.053"	"N"	"1.0000"	1	"1228"	"N"	"0.9999875873015338"	0	"na"	"N"	"0.9999968708128864"	0	"na"	"N"	"0.9559974818330303"	0	"na"	"Y"	"0.01757988373902485"	1	"165"	"IMPDH2_sequences_filtered_longestORFs_mafft_prank_part2_prank"	"IMPDH2_part2"	538	12	"0.026754574269"	"0.025"	"Y"	0	2	"356, 360"	"Y"	"0.0006852185108705853"	1	"360"	"Y"	"5.378308196075921e-16"	7	"183, 192, 240, 270, 284, 292, 360"	"Y"	"6.114608498512458e-08"	1	"360"	"N"	"nan"	0	"na"	"Yes duplication, perfect separation of groups"	""	"shared"
"INHBE"	"INHBE"	"INHBE"	"orf8"	"INHBE"	"list23_COV_list1orf"	"inhibin subunit beta E"	"-"	"no"	24	1056	352	0.38677	0.55937	0.1249	0.323	0.49865	1	0.68668	1	0.79581	1	NA	NA	NA	""	"INHBE"	"ENSMLUG00000001009.2"	"ENSMLUT00000001003.2"	15	354	87.85310734	0.341318744	0.3176	1.66327	1.71573	-3702.997967	-3692.734981	3.49e-05	-3701.695406	2.3e-05	3	"V88, S89, G206"	"INHBE"	"ENSG00000139269.2"	"ENST00000266646.2"	19	351	98.29059829	0.291782947	0.1604	0.49118	0.49247	-2420.61857	-2420.509659	0.89681023	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	846	282	0.34811	0.36159	0.0781	0.2244	0.43355	1	0.65462	1	0.73741	1	NA	NA	NA	""	"INHBE"	"INHBE_sequences_filtered_longestORFs_mafft_mincov_prank"	"INHBE_all"	416	24	"0.342439624293"	"0.322"	"N"	"1.0000"	5	"64, 178, 214, 245, 268"	"N"	"0.9999995054391861"	0	"na"	"N"	"0.8585915620276827"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.376438722738118"	0	"na"	"INHBE_sequences_filtered_longestORFs_mafft_prank"	"INHBE"	369	12	"0.390243108621"	"0.369"	"Y"	0.0017	6	"5, 72, 101, 204, 222, 224"	"Y"	"0.022636878720498972"	1	"222"	"Y"	"0.028198594818389013"	1	"222"	"Y"	"0.0018941217582224507"	1	"222"	"Y"	"0.0014721961698403688"	1	"222"	""	""	"shared"
"INTS4"	"INTS4"	"INTS4"	"M"	"INTS4"	"list26_COV_list4dataset2nonOrf"	"integrator complex subunit 4"	"INT4|MST093"	"no"	24	2895	965	0.06348	0.30522	0.0184	0.2891	1	1	1	1	1	1	NA	NA	NA	""	"INTS4"	"ENSMLUG00000005683.2"	"ENSMLUT00000005694.2"	7	965	99.37823834	0.066035482	0.2457	0.40161	0.40172	-5761.213561	-5761.183937	0.97081049	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"INTS4"	0.347662133	1	""	NA	NA	NA	""	""	2541	847	0.0898	0.23188	0.0186	0.207	1	1	1	1	1	1	NA	NA	NA	""	"INTS4"	"INTS4_sequences_filtered_longestORFs_mafft_mincov_prank"	"INTS4_all"	1451	23	"0.065534166740"	"0.069"	"N"	"0.9979"	2	"237, 881"	"N"	"0.9999992099641014"	0	"na"	"N"	"0.6279142548125374"	0	"na"	"N"	"1.0"	0	"na"	"N"	"1.0"	0	"na"	"INTS4_bat_select_mafft_prank"	"INTS4"	1016	10	"0.0760288371690115"	"0.079"	"N"	0.9908	3	"218, 219, 731"	"N"	"0.999998918289424"	0	"na"	"Y"	"0.00466417072417321"	4	"25, 521, 988, 989"	"N"	"1.0"	0	"na"	"N"	"0.5804219151408183"	0	"na"	""	""	"shared"
"ITGB1"	"ITGB1"	"ITGB1"	"orf8"	"ITGB1"	"list25_COV_list3dataset2orf"	"integrin subunit beta 1"	"CD29|FNRB|GPIIA|MDF2|MSK12|VLA-BETA|VLAB"	"yes"	24	2406	802	0.08863	0.38988	0.0372	0.4199	4.944e-07	3.1724e-05	1.0091e-06	5.55005e-05	1.1028e-06	6.0654e-05	0.127	15.9223	5	"15_V_0.914,387_G_0.957,580_E_0.924,752_K_0.936,778_Q_1.000"	"ITGB1"	"ENSMLUG00000017570.2"	"ENSMLUT00000017574.2"	10	799	99.62453066	0.045400673	0.2938	0.5461	0.54338	-5214.22421	-5213.924729	0.741202805	NA	NA	NA	""	"ITGB1"	"ENSG00000150093.18"	"ENST00000302278.7"	17	799	99.24906133	0.086420105	0.1678	0.33069	0.32447	-4625.018527	-4623.231946	0.167531983	NA	NA	NA	""	"ITGB1"	1	1	""	NA	NA	NA	""	""	2061	687	0.10232	0.27124	0.0308	0.3012	0.0014809	0.0221197307692308	0.0038315	0.0614636458333333	0.0057988	0.0970668695652174	4.481	2.56687	7	"13_V_0.945,445_K_0.928,446_E_0.938,496_E_0.956,554_R_0.934,645_K_0.959,667_Q_0.999"	"ITGB1"	"ITGB1_sequences_filtered_longestORFs_mafft_mincov_prank"	"ITGB1_all"	948	24	"0.075389116543"	"0.070"	"Y"	"0.0000"	7	"15, 387, 442, 602, 665, 666, 815"	"Y"	"7.537730013261963e-28"	1	"815"	"Y"	"8.405361714688995e-41"	1	"815"	"Y"	"8.289317990525046e-29"	1	"815"	"Y"	"5.175278539688275e-34"	1	"815"	"ITGB1_sequences_filtered_longestORFs_mafft_prank"	"ITGB1"	880	12	"0.062427808503"	"0.057"	"Y"	0	3	"576, 716, 783"	"Y"	"7.350255927039871e-10"	1	"783"	"na"	"na"	0	"na"	"Y"	"2.825276423737631e-13"	1	"783"	"Y"	"1.5699807337461194e-36"	1	"783"	"Highly conserved gene. PS triggered by one site that is G/Q toggling furing bat evolution over both ancient and recent times as it seems polymorphic now too."	""	"shared"
"JAKMIP1"	"JAKMIP1"	"JAKMIP1"	"nsp13"	"JAKMIP1"	"list26_COV_list4dataset2nonOrf"	"janus kinase and microtubule interacting protein 1"	"Gababrbp|JAMIP1|MARLIN1"	"no"	24	2496	832	0.01403	0.35654	0.0073	0.5234	0.032632	0.165306842105263	0.0018532	0.0222963125	0.10161	0.56012	0.129	5.15252	1	"277_V_0.959"	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	1845	615	0.02062	0.15767	0.0044	0.2154	1	1	1	1	0.99972	1	NA	NA	NA	""	"JAKMIP1"	"JAKMIP1_sequences_filtered_longestORFs_mafft_mincov_prank"	"JAKMIP1_all"	2728	23	"na"	"na"	"N"	"0.9992"	1	"354"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"JAKMIP1_sequences_filtered_longestORFs_mafft_prank"	"JAKMIP1"	1144	9	"0.056908187727"	"0.055"	"Y"	0	11	"704, 908, 910, 925, 926, 928, 953, 974, 991, 1014, 1100"	"N"	"0.9999998754210615"	0	"na"	"Y"	"0.02067784386692642"	2	"640, 1012"	"N"	"1.0"	0	"na"	"N"	"0.9130177108989469"	0	"na"	""	""	"shared"
"LARP1"	"LARP1"	"LARP1"	"N"	"LARP1"	"list26_COV_list4dataset2nonOrf"	"La ribonucleoprotein domain family member 1"	"LARP"	"no"	24	3066	1022	0.09549	0.29482	0.0258	0.2698	0.49555	1	0.79066	1	0.78293	1	NA	NA	NA	""	"LARP1"	"ENSMLUG00000002608.2"	"ENSMLUT00000002615.2"	7	954	93.08176101	0.103751344	0.2012	0.48234	0.52496	-5512.860831	-5488.781817	3.49e-11	-5512.856226	3.95e-12	9	"C800, K786, S803, L805, V214, F795, P796, S797, M799"	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"LARP1"	1	1	""	NA	NA	NA	""	""	2589	863	0.10596	0.20656	0.02	0.1892	0.47127	1	0.71476	1	0.77053	1	NA	NA	NA	""	"LARP1"	"LARP1_sequences_filtered_longestORFs_mafft_mincov_prank"	"LARP1_all"	2718	24	"0.076249252518"	"0.085"	"Y"	"0.0000"	33	"962, 986, 1000, 1343, 1352, 1370, 1385, 1680, 1702, 1716, 1726, 1745, 1854, 1956, 2049, 2078, 2079, 2081, 2235, 2390, 2428, 2469, 2488, 2573, 2601, 2619, 2669, 2670, 2686, 2687, 2688, 2689, 2700"	"N"	"0.05302745779921875"	0	"na"	"Y"	"3.048378244134424e-11"	6	"1745, 1821, 1854, 2083, 2390, 2687"	"Y"	"0.04573003390017499"	0	""	"Y"	"0.0004496684610310375"	3	"1821, 1854, 2687"	"LARP1_sequences_filtered_longestORFs_mafft_prank"	"LARP1"	1482	12	"0.100719600329"	"0.091"	"N"	0.4329	0	"na"	"N"	"0.9999980706798364"	0	"na"	"Y"	"1.1845531058214244e-05"	8	"474, 638, 642, 727, 729, 736, 1449, 1450"	"N"	"1.0"	0	"na"	"N"	"0.804125441667414"	0	"na"	""	""	"shared"
"LARP4B"	"LARP4B"	"LARP4B"	"nsp12"	"LARP4B"	"list24_COV_list2nonOrf"	"La ribonucleoprotein domain family member 4B"	"KIAA0217|LARP5"	"no"	24	2223	741	0.19866	0.42868	0.0622	0.3133	0.41368	0.917716091954023	0.4579	0.963341530054645	0.71903	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"LARP4B"	"ENSG00000107929.14"	"ENST00000612396.4"	9	739	98.91745602	0.093925415	0.0827	0.12243	0.12243	-3514.543999	-3514.571678	0.972700554	NA	NA	NA	""	"LARP4B"	1	1	""	NA	NA	NA	""	""	1740	580	0.23756	0.1925	0.0324	0.1363	1	1	1	1	1	1	NA	NA	NA	""	"LARP4B"	"LARP4B_sequences_filtered_longestORFs_mafft_mincov_prank"	"LARP4B_all"	5775	24	"0.175312895094"	"0.193"	"Y"	"0.0003"	11	"1475, 1726, 2604, 4419, 4428, 4444, 4448, 4492, 4810, 5195, 5240"	"N"	"0.9999994670553461"	0	"na"	"Y"	"0.014491164567191335"	1	"5698"	"Y"	"0.00015909643979889065"	0	""	"Y"	"6.772873649070608e-05"	1	"5698"	"LARP4B_sequences_filtered_longestORFs_mafft_prank"	"LARP4B"	2439	12	"0.218732299035"	"0.214"	"N"	0.9753	4	"382, 1330, 1967, 2425"	"N"	"0.999998634645658"	0	"na"	"N"	"0.9999977869790131"	0	"na"	"N"	"1.0"	0	"na"	"N"	"1.0"	0	"na"	""	""	"shared"
"LARP7"	"LARP7"	"LARP7"	"nsp8"	"LARP7"	"list24_COV_list2nonOrf"	"La ribonucleoprotein domain family member 7"	"ALAZS|HDCMA18P|PIP7S"	"no"	22	1755	585	0.16551	0.39095	0.0597	0.3609	0.12211	0.427385	0.17148	0.525615234375	1	1	NA	NA	NA	""	"LARP7"	"ENSMLUG00000027214.1"	"ENSMLUT00000026813.1"	8	503	89.46322068	0.136163316	1.0096	2.02982	2.04874	-4890.2203	-4888.005039	0.109125029	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	1572	524	0.13884	0.31163	0.0435	0.3131	0.56334	1	0.43042	1	0.84622	1	NA	NA	NA	""	"LARP7"	"LARP7_sequences_filtered_longestORFs_mafft_mincov_prank"	"LARP7_all"	864	24	"0.209704722289"	"0.175"	"N"	"0.5331"	6	"109, 415, 486, 503, 666, 677"	"N"	"0.5891998189502629"	0	"na"	"Y"	"0.002145546509367734"	11	"109, 383, 399, 419, 422, 434, 497, 658, 661, 666, 677"	"Y"	"0.040966525376057605"	0	""	"Y"	"8.431084951431661e-05"	1	"677"	"LARP7_sequences_filtered_longestORFs_mafft_prank"	"LARP7"	680	11	"0.171027104028"	"0.155"	"N"	0.3683	7	"143, 285, 294, 485, 487, 488, 566"	"N"	"0.9999998387802537"	0	"na"	"N"	"0.6801137687220536"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.2621076452154077"	0	"na"	""	""	"shared"
"LMAN2"	"LMAN2"	"LMAN2"	"nsp7"	"LMAN2"	"list26_COV_list4dataset2nonOrf"	"lectin, mannose binding 2"	"C5orf8|GP36B|VIP36"	"no"	24	1071	357	0.04915	0.43971	0.0317	0.6451	0.030744	0.159951891891892	0.015562	0.103684482758621	0.095872	0.550906268656716	1.959	3.00968	1	"9_L_0.955"	"LMAN2"	"ENSMLUG00000009409.2"	"ENSMLUT00000009408.2"	12	360	98.05555556	0.061497675	0.4011	1.01052	1.14983	-2800.905918	-2791.547389	8.62e-05	-2798.830566	0.000135309	1	"S147"	"LMAN2"	"ENSG00000169223.14"	"ENST00000515209.5"	12	326	99.0797546	0.126566544	0.1801	0.33031	0.33033	-1883.954561	-1883.954464	0.999903005	NA	NA	NA	""	"LMAN2"	0.011501474	0.286979492	""	NA	NA	NA	""	""	711	237	0.09618	0.26238	0.0307	0.3192	0.32704	1	0.5888	1	0.61587	1	NA	NA	NA	""	"LMAN2"	"LMAN2_sequences_filtered_longestORFs_mafft_mincov_prank_part1_prank"	"LMAN2_all_part1"	747	24	"0.081787077552"	"0.064"	"Y"	"0.0002"	3	"26, 417, 492"	"N"	"0.0893634747928795"	0	"na"	"Y"	"2.004485221084069e-08"	4	"26, 27, 28, 621"	"Y"	"0.012562991117452701"	0	""	"Y"	"0.0015430412072925009"	4	"26, 28, 340, 621"	"LMAN2_sequences_filtered_longestORFs_D100gp1_prank"	"LMAN2_100-1"	400	11	"0.047004307549"	"0.044"	"N"	0.0542	2	"9, 144"	"Y"	"0.036766070641131875"	1	"144"	"Y"	"7.544550390677595e-05"	1	"144"	"Y"	"0.00912260390270626"	1	"144"	"Y"	"0.00012390443189913585"	1	"144"	"Duplication YES. Group ok. PS triggered by a single site. Rest conserved"	""	"shared"
"LOX"	"LOX"	"LOX"	"orf8"	"LOX"	"list23_COV_list1orf"	"lysyl oxidase"	"AAT10"	"no"	23	1254	418	0.12674	0.39385	0.0496	0.3916	1	1	1	1	0.82371	1	NA	NA	NA	""	"LOX"	"ENSMLUG00000026720.1"	"ENSMLUT00000024286.1"	6	417	98.56115108	0.128529144	0.3142	0.55566	0.55566	-2643.25822	-2643.258229	0.999991	NA	NA	NA	""	"LOX"	"ENSG00000113083.13"	"ENST00000639739.1"	17	417	89.6882494	0.159084185	0.1725	0.3857	0.3857	-2373.668388	-2373.668728	0.999660058	NA	NA	NA	""	"LOX"	0.9426572	1	""	NA	NA	NA	""	""	810	270	0.09993	0.18784	0.02	0.2006	0.95383	1	0.99312	1	0.99835	1	NA	NA	NA	""	"LOX"	"LOX_sequences_filtered_longestORFs_mafft_mincov_prank"	"LOX_all"	562	23	"0.172116636994"	"0.143"	"Y"	"0.0000"	4	"85, 159, 335, 346"	"N"	"0.9999990803330229"	0	"na"	"N"	"0.2641538582060904"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.9675385595886871"	0	"na"	"LOX_sequences_filtered_longestORFs_mafft_prank"	"LOX"	487	12	"0.114354273651"	"0.097"	"N"	0.4111	4	"80, 136, 160, 371"	"N"	"0.9999992464989301"	0	"na"	"Y"	"0.0020561936709213246"	5	"27, 86, 108, 115, 136"	"N"	"1.0"	0	"na"	"N"	"0.39534360742614594"	0	"na"	""	""	"shared"
"MAP7D1"	"MAP7D1"	"MAP7D1"	"orf10"	"MAP7D1"	"list25_COV_list3dataset2orf"	"MAP7 domain containing 1"	"PARCC1|RPRC1"	"no"	24	2538	846	0.19093	0.42876	0.0659	0.345	0.56264	1	0.67164	1	0.84817	1	NA	NA	NA	""	"MAP7D1"	"ENSMLUG00000012362.2"	"ENSMLUT00000012367.2"	13	793	86.25472888	0.154264292	0.2775	0.91788	0.92033	-5765.175095	-5764.40945	0.465033887	NA	NA	NA	""	"MAP7D1"	"ENSG00000116871.15"	"ENST00000530975.4"	16	247	90.28340081	0.139878192	0.2025	0.39017	0.39018	-1366.41079	-1366.410994	0.999796021	NA	NA	NA	""	"MAP7D1"	1	1	""	NA	NA	NA	""	""	1788	596	0.24239	0.27063	0.048	0.1982	0.16076	0.764106172839506	0.34789	1	0.37994	1	NA	NA	NA	""	"MAP7D1"	"MAP7D1_sequences_filtered_longestORFs_mafft_mincov_prank"	"MAP7D1_all"	1517	22	"0.231338346469"	"0.210"	"Y"	"0.0000"	16	"160, 221, 240, 251, 714, 716, 717, 734, 735, 737, 738, 739, 748, 764, 851, 1291"	"N"	"0.9999993949870271"	0	"na"	"N"	"0.9999980106505751"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.842821573471387"	0	"na"	"MAP7D1_sequences_filtered_longestORFs_mafft_prank"	"MAP7D1"	1468	12	"0.198984283374"	"0.197"	"N"	0.9293	5	"363, 724, 911, 1278, 1347"	"N"	"0.9999996340230369"	0	"na"	"N"	"0.9999999762640076"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.8302735949806761"	0	"na"	""	""	"shared"
"MARC1"	"MARC1"	"01/03/2020"	"nsp7"	"01/03/2020"	"list24_COV_list2nonOrf"	"mitochondrial amidoxime reducing component 1"	"MOSC1"	"no"	24	1023	341	0.30561	0.87314	0.1812	0.5928	0.52595	1	0.18997	0.554079166666667	0.82394	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	645	215	0.36972	0.31499	0.0713	0.1929	0.25792	1	0.46322	1	0.52227	1	NA	NA	NA	""	"MARC1"	"MTARC1_sequences_filtered_longestORFs_mafft_mincov_prank_part1_prank"	"MTARC1_all_part1"	871	24	"0.259082353825"	"0.254"	"N"	"0.9494"	6	"119, 256, 300, 310, 321, 793"	"N"	"0.8746790384338535"	0	"na"	"N"	"0.08467836426671232"	0	"na"	"N"	"0.34610952768969544"	0	"na"	"N"	"0.05664225599327754"	0	"na"	"MTARC1_bat_select_mafft_prank"	"MTARC1"	386	9	"0.171114750686732"	"0.188"	"N"	0.0986	32	"7, 30, 31, 38, 39, 41, 46, 48, 62, 64, 68, 74, 82, 85, 91, 94, 113, 120, 162, 179, 183, 211, 218, 220, 245, 270, 273, 300, 306, 331, 336, 371"	"N"	"0.999999770750973"	0	"na"	"N"	"0.99998088852708"	0	"na"	"N"	"1.0"	0	"na"	"N"	"1.0"	0	"na"	""	""	"shared"
"MARK1"	"MARK1"	"MARK1"	"orf9b"	"MARK1"	"list25_COV_list3dataset2orf"	"microtubule affinity regulating kinase 1"	"MARK|Par-1c|Par1c"	"no"	24	2391	797	0.08147	0.24303	0.0194	0.2383	0.018441	0.112695	0.062265	0.272409375	0.14046	0.694036538461539	1.104	3.80076	2	"333_I_0.942,515_A_0.962"	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"MARK1"	"ENSG00000116141.15"	"ENST00000402574.5"	9	781	99.23175416	0.079775242	0.0454	0.08171	0.08187	-3545.187172	-3545.0095	0.837216986	NA	NA	NA	""	"MARK1"	0.163968089	1	""	NA	NA	NA	""	""	1980	660	0.10132	0.13152	0.0131	0.1292	0.29796	1	0.54656	1	0.58181	1	NA	NA	NA	""	"MARK1"	"MARK1_sequences_filtered_longestORFs_mafft_mincov_prank_part2_prank"	"MARK1_all_part2"	1260	23	"0.062013277987"	"0.065"	"Y"	"0.0272"	7	"40, 44, 293, 306, 462, 758, 1233"	"Y"	"0.009116381763125295"	1	"758"	"Y"	"3.8693583251427994e-07"	2	"462, 758"	"N"	"0.2763740713275202"	0	"na"	"Y"	"0.005434433476480101"	1	"758"	"MARK1_sequences_filtered_longestORFs_mafft_prank_part2_prank"	"MARK1_part2"	1171	12	"0.052460524012"	"0.051"	"N"	0.221	2	"787, 1071"	"N"	"0.9999997083260012"	0	"na"	"Y"	"0.028467597972819232"	1	"293"	"N"	"1.0"	0	"na"	"N"	"0.7795799733848592"	0	"na"	"Duplication YES. Group ok."	""	"shared"
"MARK2"	"MARK2"	"MARK2"	"orf9b"	"MARK2"	"list25_COV_list3dataset2orf"	"microtubule affinity regulating kinase 2"	"EMK-1|EMK1|PAR-1|Par-1b|Par1b"	"no"	24	2367	789	0.01554	0.20698	0.004	0.2583	1	1	1	1	0.99909	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"MARK2"	0.973207517	1	""	NA	NA	NA	""	""	1857	619	0.01526	0.15055	0.0029	0.1916	1	1	1	1	0.99956	1	NA	NA	NA	""	"MARK2"	"MARK2_sequences_filtered_longestORFs_mafft_mincov_prank_part1_prank"	"MARK2_all_part1"	2108	24	"na"	"na"	"N"	"1.0000"	1	"1244"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"MARK2_sequences_filtered_longestORFs_mafft_prank_part1_prank"	"MARK2_part1"	1481	12	"0.023250118338"	"0.025"	"Y"	0	13	"105, 115, 367, 558, 566, 574, 577, 674, 689, 1320, 1370, 1418, 1437"	"N"	"0.9999997391569535"	0	"na"	"Y"	"0.0010837373321862945"	3	"105, 574, 1320"	"Y"	"3.195299245325374e-08"	0	""	"na"	"na"	0	"na"	"Duplication YES. Group ok. 106 seq total so many within sp (indels / splices). Does not look PS positive."	""	"shared"
"MARK3"	"MARK3"	"MARK3"	"orf9b"	"MARK3"	"list25_COV_list3dataset2orf"	"microtubule affinity regulating kinase 3"	"CTAK1|KP78|PAR1A|Par-1a"	"no"	23	2262	754	0.07222	0.26428	0.0184	0.2547	1	1	1	1	1	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"MARK3"	"ENSG00000075413.17"	"ENST00000556744.1"	16	332	98.19277108	0.082112262	0.1058	0.29674	0.29722	-1892.469655	-1890.656982	0.163217273	NA	NA	NA	""	"MARK3"	1	1	""	NA	NA	NA	""	""	1830	610	0.13101	0.1388	0.0161	0.123	0.81544	1	1	1	1	1	NA	NA	NA	""	"MARK3"	"MARK3_sequences_filtered_longestORFs_mafft_mincov_prank_part1_prank"	"MARK3_all_part1"	3633	24	"na"	"na"	"Y"	"0.0195"	3	"385, 491, 3611"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"MARK3_sequences_filtered_longestORFs_mafft_prank_part1_prank"	"MARK3_part1"	1275	12	"0.052301784234"	"0.047"	"Y"	0.0163	2	"443, 672"	"N"	"0.9999998830280743"	0	"na"	"Y"	"0.0003415665249197995"	5	"639, 646, 649, 954, 1171"	"N"	"1.0"	0	"na"	"N"	"0.9990004998331715"	0	"na"	"Duplication YES. Group ok."	""	"shared"
"MAT2B"	"MAT2B"	"MAT2B"	"nsp9"	"MAT2B"	"list24_COV_list2nonOrf"	"methionine adenosyltransferase 2B"	"MAT-II|MATIIbeta|Nbla02999|SDR23E1|TGR"	"no"	24	1005	335	0.07161	0.22972	0.0158	0.2209	1	1	1	1	0.99968	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"MAT2B"	1	1	""	NA	NA	NA	""	""	915	305	0.07952	0.16724	0.0127	0.1593	1	1	1	1	0.99984	1	NA	NA	NA	""	"MAT2B"	"MAT2B_sequences_filtered_longestORFs_mafft_mincov_prank"	"MAT2B_all"	670	24	"0.127391282546"	"0.123"	"N"	"0.4664"	1	"449"	"N"	"0.9999983677043608"	0	"na"	"N"	"0.9952761645355965"	0	"na"	"N"	"0.15198096442869868"	0	"na"	"N"	"0.1512229562062779"	0	"na"	"MAT2B_sequences_filtered_longestORFs_mafft_prank"	"MAT2B"	577	12	"0.069577506008"	"0.083"	"N"	1	0	"na"	"N"	"0.9999995800122605"	0	"na"	"N"	"0.46121680811375965"	0	"na"	"N"	"1.0"	0	"na"	"N"	"1.0"	0	"na"	""	""	"shared"
"MDN1"	"MDN1"	"MDN1"	"orf7a"	"MDN1"	"list23_COV_list1orf"	"midasin AAA ATPase 1"	"Rea1"	"yes"	24	16815	5605	0.3016	0.46605	0.0909	0.3014	0.00096101	0.0119351241935484	0.0016419	0.0203913387096774	0.0074824	0.0872946666666667	1.069	3.56119	13	"2971_S_0.982,3062_N_0.945,3154_R_0.952,3572_R_0.954,4012_P_0.957,4048_G_0.986,4079_R_0.955,4362_V_0.948,4385_T_0.930,4401_V_0.948,5015_K_0.977,5020_R_0.954,5290_N_0.930"	"MDN1"	"ENSMLUG00000006776.2"	"ENSMLUT00000006889.2"	9	5603	96.76958772	0.151440834	0.3057	0.88231	0.89377	-44274.64223	-44236.81952	3.75e-17	-44269.81604	4.53e-16	3	"I1258, R1253, H1262"	"MDN1"	"ENSG00000112159.11"	"ENST00000629399.2"	10	5597	98.80293014	0.194996798	0.1398	0.29001	0.29048	-31963.00569	-31961.67182	0.263456239	NA	NA	NA	""	"MDN1"	0.630980112	1	""	NA	NA	NA	""	""	14289	4763	0.31705	0.31911	0.065	0.2051	0.058877	0.372389672131148	0.13072	0.7863625	0.19823	1	0.728	3.79785	3	"2650_N_0.905,3737_V_0.903,4278_K_0.939"	"MDN1"	"MDN1_sequences_filtered_longestORFs_mafft_mincov_prank"	"MDN1_all"	5863	24	"0.250623848616"	"0.255"	"Y"	"0.0003"	75	"275, 330, 342, 481, 546, 553, 703, 714, 1399, 1569, 1691, 1834, 2115, 2149, 2168, 2501, 2510, 2536, 2629, 2944, 3066, 3091, 3130, 3162, 3174, 3265, 3300, 3316, 3413, 3418, 3421, 3469, 3532, 3584, 3587, 3684, 3763, 3857, 3917, 4144, 4155, 4158, 4160, 4196, 4313, 4320, 4323, 4385, 4465, 4466, 4483, 4515, 4535, 4618, 4655, 4673, 4674, 4685, 4753, 4817, 4901, 4936, 5092, 5098, 5200, 5202, 5219, 5238, 5307, 5390, 5474, 5517, 5557, 5726, 5727"	"N"	"0.9999975629864503"	0	"na"	"Y"	"9.882460511621072e-05"	1	"4535"	"N"	"1.0"	0	"na"	"Y"	"9.830704087230954e-06"	0	""	"MDN1_sequences_filtered_longestORFs_mafft_prank"	"MDN1"	5692	12	"0.215443695281"	"0.219"	"N"	0.0659	41	"2, 75, 465, 530, 1027, 1285, 1396, 1410, 1942, 2053, 2155, 2246, 2449, 2623, 2743, 2745, 2866, 2867, 2946, 2957, 2992, 3071, 3166, 3197, 3338, 3458, 3476, 3519, 3757, 3833, 4058, 4564, 4894, 4999, 5018, 5072, 5093, 5200, 5241, 5266, 5333"	"N"	"0.9999999534120445"	0	"na"	"Y"	"1.1414171459035473e-05"	7	"2943, 3032, 3070, 3071, 3197, 3476, 4042"	"N"	"1.0"	0	"na"	"Y"	"0.020181276709079873"	0	""	""	""	"shared"
"MEPCE"	"MEPCE"	"MEPCE"	"nsp8"	"MEPCE"	"list24_COV_list2nonOrf"	"methylphosphate capping enzyme"	"BCDIN3"	"no"	22	2079	693	0.15687	0.42088	0.0557	0.355	0.074341	0.301276684210526	0.14289	0.466208898305085	0.21194	0.93789540229885	0.779	5.11823	4	"64_-_0.976,286_L_0.925,377_A_0.937,508_P_0.923"	"MEPCE"	"ENSMLUG00000009678.2"	"ENSMLUT00000009684.2"	8	681	92.80469897	0.157081921	0.2342	0.5599	0.57057	-4422.638039	-4418.472185	0.015516458	-4422.297898	0.005672746	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"MEPCE"	0.000504613	0.034161031	"methylphosphate capping enzyme"	NA	NA	NA	""	""	1518	506	0.12137	0.2415	0.027	0.2222	0.1999	0.894901162790698	0.38513	1	1	1	NA	NA	NA	""	"MEPCE"	"MEPCE_sequences_filtered_longestORFs_mafft_mincov_prank"	"MEPCE_all"	973	22	"0.149771190695"	"0.149"	"N"	"0.9796"	2	"41, 639"	"N"	"0.9999979106554746"	0	"na"	"N"	"0.6189175407089369"	0	"na"	"N"	"0.9093729344679998"	0	"na"	"N"	"0.28996356552932095"	0	"na"	"MEPCE_sequences_filtered_longestORFs_mafft_prank"	"MEPCE"	726	12	"0.219093876368"	"0.204"	"N"	0.9352	2	"87, 456"	"N"	"0.2688036084056731"	0	"na"	"Y"	"0.04508406397524983"	1	"105"	"N"	"0.1435603176558531"	0	"na"	"Y"	"0.02266349043863414"	0	""	""	""	"shared"
"MFGE8"	"MFGE8"	"MFGE8"	"orf8"	"MFGE8"	"list25_COV_list3dataset2orf"	"milk fat globule-EGF factor 8 protein"	"BA46|EDIL1|HMFG|HsT19888|MFG-E8|MFGM|OAcGD3S|SED1|SPAG10|hP47"	"no"	24	1164	388	0.18196	0.78587	0.1345	0.739	0.54812	1	0.32569	0.788620440251572	0.95525	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	771	257	0.11983	0.38704	0.0527	0.4399	1	1	1	1	1	1	NA	NA	NA	""	"MFGE8"	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	"MFGE8_sequences_filtered_longestORFs_mafft_prank"	"MFGE8"	646	11	"0.330234703292"	"0.207"	"Y"	0.0112	9	"130, 138, 154, 189, 204, 211, 529, 619, 621"	"N"	"0.9999972678525444"	0	"na"	"Y"	"0.013757050385994894"	1	"339"	"N"	"1.0"	0	"na"	"Y"	"0.0013508787126702152"	1	"339"	""	""	"onlybats"
"MIB1"	"MIB1"	"MIB1"	"nsp9"	"MIB1"	"list24_COV_list2nonOrf"	"mindbomb E3 ubiquitin protein ligase 1"	"DIP-1|DIP1|LVNC7|MIB|ZZANK2|ZZZ6"	"no"	24	3021	1007	0.00559	0.26166	0.0018	0.3281	1	1	1	1	0.99846	1	NA	NA	NA	""	"MIB1"	"ENSMLUG00000004022.2"	"ENSMLUT00000004026.2"	11	931	99.67776584	0.007742272	0.2488	0.47316	0.47675	-5717.506378	-5712.206308	0.004991245	-5713.054254	0.192826091	NA	""	"MIB1"	"ENSG00000101752.11"	"ENST00000261537.6"	12	1007	92.85004965	0.026255584	0.123	0.18047	0.1825	-4704.826366	-4701.178491	0.026046419	-4701.735465	0.291225348	NA	""	"MIB1"	0.88359204	1	""	NA	NA	NA	""	""	2535	845	0.01116	0.14901	0.0022	0.1932	1	1	1	1	0.99945	1	NA	NA	NA	""	"MIB1"	"MIB1_sequences_filtered_longestORFs_mafft_mincov_prank"	"MIB1_all"	1103	24	"0.007412542081"	"0.007"	"N"	"1.0000"	0	"na"	"N"	"0.999999995030521"	0	"na"	"N"	"0.9997613544724151"	0	"na"	"N"	"0.9970044955027636"	0	"na"	"N"	"0.9970044955036704"	0	"na"	"MIB1_sequences_filtered_longestORFs_mafft_prank"	"MIB1"	1141	12	"0.010708089720"	"0.010"	"N"	1	0	"na"	"N"	"0.3131853669743744"	0	"na"	"Y"	"3.9565815165420535e-06"	2	"1015, 1045"	"N"	"1.0"	0	"na"	"Y"	"0.00020407969064175605"	0	""	"Highly conserved gene."	""	"shared"
"MIPOL1"	"MIPOL1"	"MIPOL1"	"nsp13"	"MIPOL1"	"list26_COV_list4dataset2nonOrf"	"mirror-image polydactyly 1"	"CCDC193"	"no"	24	1329	443	0.44036	0.37986	0.0967	0.2195	0.093849	0.36131865	0.22859	0.6286225	0.24618	1	7.899	3.11818	0	"noneOver_0.9"	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"MIPOL1"	"ENSG00000151338.18"	"ENST00000545536.5"	18	425	97.41176471	0.574467255	0.1035	0.39646	0.42094	-2643.795389	-2637.189776	0.001352754	-2643.657324	0.000322479	2	"R9, C20"	"MIPOL1"	0.371779525	1	""	NA	NA	NA	""	""	1218	406	0.50665	0.30905	0.0832	0.1643	0.095599	0.5257945	0.23561	1	0.24936	1	8.327	3.60215	1	"46_C_0.905"	"MIPOL1"	"MIPOL1_sequences_filtered_longestORFs_mafft_mincov_prank"	"MIPOL1_all"	1757	24	"0.512484277696"	"0.437"	"N"	"0.4608"	6	"122, 129, 150, 227, 292, 408"	"Y"	"8.425034731629987e-05"	1	"1172"	"Y"	"6.773362808447534e-05"	1	"1172"	"Y"	"5.425421818460034e-07"	1	"1172"	"Y"	"4.948555179068949e-07"	2	"152, 1172"	"MIPOL1_sequences_filtered_longestORFs_mafft_prank"	"MIPOL1"	749	12	"0.468056639244"	"0.460"	"Y"	8e-04	6	"93, 99, 436, 610, 611, 664"	"N"	"0.36946219962943133"	0	"na"	"N"	"0.16022450488042922"	0	"na"	"Y"	"0.00033815709241324894"	1	"677"	"Y"	"0.00011077604581825765"	2	"668, 677"	""	""	"shared"
"MOGS"	"MOGS"	"MOGS"	"nsp7"	"MOGS"	"list26_COV_list4dataset2nonOrf"	"mannosyl-oligosaccharide glucosidase"	"CDG2B|CWH41|DER7|GCS1"	"no"	22	2514	838	0.26344	0.42818	0.0758	0.2877	0.32782	0.76957743902439	0.52304	1	0.61797	1	NA	NA	NA	""	"MOGS"	"ENSMLUG00000002652.1"	"ENSMLUT00000002648.1"	10	837	95.69892473	0.168764689	0.2855	0.92877	0.93093	-6836.753533	-6835.811684	0.389906232	NA	NA	NA	""	"MOGS"	"ENSG00000115275.11"	"ENST00000452063.6"	18	732	98.63387978	0.209879997	0.134	0.39272	0.39394	-4654.436421	-4653.417236	0.360888945	NA	NA	NA	""	"MOGS"	0.003943108	0.140860154	""	NA	NA	NA	""	""	1992	664	0.30752	0.32142	0.0623	0.2025	0.060067	0.372996693548387	0.17039	0.934465492957747	0.17011	1	4.824	3.21378	2	"94_R_0.910,243_I_0.959"	"MOGS"	"MOGS_sequences_filtered_longestORFs_mafft_mincov_prank"	"MOGS_all"	856	24	"0.205738341931"	"0.205"	"N"	"0.4746"	13	"184, 256, 318, 349, 370, 386, 408, 439, 572, 589, 624, 631, 687"	"N"	"0.9999974359876561"	0	"na"	"N"	"0.7188296929103337"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.5856692901443464"	0	"na"	"MOGS_sequences_filtered_longestORFs_mafft_prank"	"MOGS"	846	12	"0.226899466104"	"0.236"	"N"	0.3783	8	"13, 210, 426, 535, 639, 712, 751, 794"	"N"	"0.9999999935716914"	0	"na"	"N"	"0.39973598777987807"	0	"na"	"N"	"0.9464851479540692"	0	"na"	"N"	"0.4950977802807309"	0	"na"	""	""	"shared"
"MOV10"	"MOV10"	"MOV10"	"N"	"MOV10"	"list26_COV_list4dataset2nonOrf"	"Mov10 RISC complex RNA helicase"	"fSAP113|gb110"	"no"	24	3012	1004	0.0581	0.29374	0.0184	0.3167	1	1	1	1	1	1	NA	NA	NA	""	"MOV10"	"ENSMLUG00000009815.2"	"ENSMLUT00000009826.2"	12	896	86.27232143	0.214017978	0.3471	1.48397	1.51014	-7834.294675	-7826.58329	0.000447701	-7830.832117	0.003556047	1	"T202"	"MOV10"	"ENSG00000155363.18"	"ENST00000357443.2"	17	1004	99.00398406	0.057554153	0.1226	0.26332	0.26367	-5540.969219	-5540.930533	0.962052746	NA	NA	NA	""	"MOV10"	0.099789404	0.957471912	""	NA	NA	NA	""	""	2391	797	0.05359	0.17042	0.01	0.1865	1	1	1	1	0.99967	1	NA	NA	NA	""	"MOV10"	"MOV10_sequences_filtered_longestORFs_mafft_mincov_prank"	"MOV10_all"	2125	24	"0.095908440356"	"0.091"	"Y"	"0.0006"	7	"467, 600, 862, 937, 1753, 1799, 1822"	"N"	"0.9999616081998488"	0	"na"	"Y"	"0.0020290899869964403"	2	"371, 1795"	"N"	"0.3516918193780413"	0	"na"	"Y"	"0.010021725425469637"	2	"371, 1795"	"MOV10_bat_cut_mafft_prank"	"MOV10"	1173	12	"0.1932496597342"	"0.196"	"Y"	0.0052	14	"7, 34, 41, 263, 391, 455, 485, 527, 575, 657, 661, 1066, 1067, 1068"	"N"	"0.999998937390611"	0	"na"	"Y"	"0.00327546160514019"	1	"391"	"N"	"1.0"	0	"na"	"Y"	"0.012727376189877581"	0	""	""	""	"shared"
"MPHOSPH10"	"MPHOSPH10"	"MPHOSPH10"	"nsp8"	"MPHOSPH10"	"list26_COV_list4dataset2nonOrf"	"M-phase phosphoprotein 10"	"CT90|MPP10|MPP10P|PPP1R106"	"no"	23	2073	691	0.36945	0.40726	0.0942	0.255	0.0081673	0.0641716428571429	0.023765	0.142961328125	0.032106	0.2472162	1.789	5.25551	1	"330_G_0.983"	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"MPHOSPH10"	"ENSG00000124383.8"	"ENST00000498451.2"	16	463	91.57667387	0.455217257	0.1392	0.46529	0.47817	-2872.957619	-2869.397157	0.028425689	-2872.894086	0.008178987	1	"N321"	"MPHOSPH10"	1	1	""	NA	NA	NA	""	""	1815	605	0.39528	0.28112	0.0673	0.1703	0.84373	1	0.96246	1	0.98084	1	NA	NA	NA	""	"MPHOSPH10"	"MPHOSPH10_sequences_filtered_longestORFs_mafft_mincov_prank"	"MPHOSPH10_all"	806	21	"0.312304114872"	"0.320"	"Y"	"0.0001"	8	"72, 187, 197, 301, 323, 400, 418, 494"	"N"	"0.06584789338899043"	0	"na"	"Y"	"0.011553122524699911"	1	"400"	"Y"	"0.03111703066108125"	1	"400"	"Y"	"0.0027203356651058553"	1	"400"	"MPHOSPH10_sequences_filtered_longestORFs_mafft_prank"	"MPHOSPH10"	797	11	"0.219365486705"	"0.214"	"Y"	0	19	"4, 58, 69, 92, 117, 128, 156, 161, 177, 305, 329, 346, 348, 358, 359, 383, 635, 659, 671"	"N"	"0.9999997545747038"	0	"na"	"N"	"0.5769195293685707"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.16202575093392788"	0	"na"	"Also looks under PS from my eyes!"	""	"shared"
"MRPS2"	"MRPS2"	"MRPS2"	"nsp8"	"MRPS2"	"list26_COV_list4dataset2nonOrf"	"mitochondrial ribosomal protein S2"	"CGI-91|COXPD36|MRP-S2|S2mt"	"no"	24	897	299	0.15502	1.17978	0.1996	1.2876	0.427	0.928785310734463	0.12306	0.415597368421053	1	1	NA	NA	NA	""	"MRPS2"	"ENSMLUG00000013877.2"	"ENSMLUT00000013879.2"	13	244	93.03278689	0.170502026	0.4602	1.8283	1.84919	-2336.049023	-2335.381647	0.513053064	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	462	154	0.16389	0.5677	0.0967	0.5902	0.32466	1	0.26986	1	0.67062	1	NA	NA	NA	""	"MRPS2"	"MRPS2_sequences_filtered_longestORFs_mafft_mincov_prank"	"MRPS2_all"	586	24	"0.207851765282"	"0.132"	"Y"	"0.0015"	7	"114, 265, 373, 408, 506, 539, 546"	"N"	"0.9999998996213485"	0	"na"	"N"	"0.11602899210880209"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.0501368004807428"	0	"na"	"MRPS2_sequences_filtered_longestORFs_mafft_prank"	"MRPS2"	721	12	"0.082667692251"	"0.091"	"N"	0.0504	9	"319, 328, 340, 341, 349, 554, 582, 594, 700"	"N"	"0.9999999342931026"	0	"na"	"N"	"0.08515687462553476"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.7649077811028417"	0	"na"	""	""	"shared"
"MRPS25"	"MRPS25"	"MRPS25"	"nsp8"	"MRPS25"	"list24_COV_list2nonOrf"	"mitochondrial ribosomal protein S25"	"MRP-S25|RPMS25"	"no"	24	522	174	0.09937	0.4868	0.0562	0.5651	0.52124	1	0.45691	0.963341530054645	0.81267	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"MRPS25"	"ENSG00000131368.7"	"ENST00000447299.1"	3	111	97.2972973	0.043297522	0.0602	0.07156	0.07156	-453.886885	-453.886924	0.999961001	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	426	142	0.09407	0.31907	0.0356	0.3785	0.77024	1	0.76365	1	0.95724	1	NA	NA	NA	""	"MRPS25"	"MRPS25_sequences_filtered_longestORFs_mafft_mincov_prank"	"MRPS25_all"	308	24	"0.072366477342"	"0.067"	"N"	"0.0628"	2	"57, 251"	"N"	"0.9999999836779808"	0	"na"	"N"	"0.1225169592175207"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.11406349636372963"	0	"na"	"MRPS25_sequences_filtered_longestORFs_mafft_prank"	"MRPS25"	230	10	"0.154765506724"	"0.135"	"Y"	0.0102	1	"60"	"N"	"0.29016377677605226"	0	"na"	"N"	"0.0547567968301941"	0	"na"	"N"	"0.8436648165963223"	0	"na"	"N"	"0.34438329921892946"	0	"na"	""	""	"shared"
"MRPS27"	"MRPS27"	"MRPS27"	"nsp8"	"MRPS27"	"list24_COV_list2nonOrf"	"mitochondrial ribosomal protein S27"	"MRP-S27|S27mt"	"yes"	24	1290	430	0.43502	0.57317	0.1371	0.3151	0.0040356	0.0361326976744186	0.014362	0.09966	0.015923	0.13932625	10.158	2.68743	1	"423_K_0.978"	"MRPS27"	"ENSMLUG00000007355.2"	"ENSMLUT00000007349.2"	10	327	94.18960245	0.219675263	0.5466	1.53511	1.53918	-3189.971077	-3188.848572	0.325463487	NA	NA	NA	""	"MRPS27"	"ENSG00000113048.16"	"ENST00000522095.1"	17	95	96.84210526	0.505373385	0.1481	0.51248	0.52516	-650.283561	-649.189016	0.334691857	NA	NA	NA	""	"MRPS27"	0.956319904	1	""	NA	NA	NA	""	""	1086	362	0.4386	0.42959	0.1022	0.2331	0.0016255	0.02244275	0.0063605	0.087456875	0.0069489	0.10701306	4.544	4.59989	4	"6_L_0.923,17_Y_0.927,211_C_0.900,356_K_0.990"	"MRPS27"	"MRPS27_sequences_filtered_longestORFs_mafft_mincov_prank"	"MRPS27_all"	600	24	"0.395788246295"	"0.406"	"N"	"0.1306"	14	"90, 105, 150, 242, 301, 339, 486, 522, 534, 545, 557, 567, 575, 587"	"N"	"0.07984023514681617"	0	"na"	"Y"	"0.013622007442688537"	2	"462, 587"	"N"	"0.064441335254013"	0	"na"	"Y"	"0.011231870065595896"	2	"462, 587"	"MRPS27_sequences_filtered_longestORFs_mafft_prank"	"MRPS27"	443	11	"0.256108512123"	"0.261"	"Y"	0	6	"10, 49, 74, 413, 425, 436"	"N"	"0.9999995383751568"	0	"na"	"N"	"0.9273291898408674"	0	"na"	"N"	"1.0"	0	"na"	"N"	"1.0"	0	"na"	""	""	"shared"
"MRPS5"	"MRPS5"	"MRPS5"	"nsp8"	"MRPS5"	"list26_COV_list4dataset2nonOrf"	"mitochondrial ribosomal protein S5"	"MRP-S5|S5mt"	"yes"	24	1293	431	0.51614	0.94585	0.2491	0.4827	5.1625e-06	0.00019875625	1.4829e-05	0.00051869125	2.4967e-05	0.000910735	1.999	5.52626	4	"17_-_0.930,48_C_0.978,136_H_0.974,351_H_1.000"	"MRPS5"	"ENSMLUG00000003183.2"	"ENSMLUT00000003187.2"	9	432	88.19444444	0.186073572	0.4689	1.0865	1.10563	-3339.688105	-3336.94474	0.064353433	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"MRPS5"	0.979691368	1	""	NA	NA	NA	""	""	933	311	0.56675	0.66983	0.1855	0.3273	0.023793	0.20818875	0.067951	0.544313	0.071387	0.677712682926829	1.274	6.33775	3	"23_C_0.984,68_S_0.901,180_I_0.956"	"MRPS5"	"MRPS5_sequences_filtered_longestORFs_mafft_mincov_prank"	"MRPS5_all"	1261	24	"0.416601635924"	"0.417"	"Y"	"0.0000"	16	"165, 306, 309, 314, 330, 375, 387, 557, 789, 893, 894, 928, 982, 1061, 1100, 1248"	"N"	"0.9999981841791056"	0	"na"	"N"	"0.25629686803992613"	0	"na"	"Y"	"0.011855065907644069"	1	"1100"	"Y"	"0.005753194576077027"	1	"1100"	"MRPS5_sequences_filtered_longestORFs_mafft_prank"	"MRPS5"	821	11	"0.223685298522"	"0.209"	"N"	0.9599	3	"362, 609, 795"	"N"	"0.9999982520286537"	0	"na"	"Y"	"0.023335640922836146"	2	"647, 795"	"N"	"0.43127902868882784"	0	"na"	"Y"	"0.03449296116373417"	0	""	""	""	"shared"
"MTCH1"	"MTCH1"	"MTCH1"	"orf6"	"MTCH1"	"list25_COV_list3dataset2orf"	"mitochondrial carrier 1"	"CGI-64|PIG60|PSAP|SLC25A49"	"no"	24	1170	390	0.01463	0.31726	0.0058	0.3982	0.40247	0.90087761627907	0.19495	0.560117537313433	0.70179	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"MTCH1"	1	1	""	NA	NA	NA	""	""	828	276	0.01403	0.1865	0.0033	0.2357	1	1	1	1	1	1	NA	NA	NA	""	"MTCH1"	"MTCH1_sequences_filtered_longestORFs_mafft_mincov_prank"	"MTCH1_all"	1228	24	"0.106148621761"	"0.100"	"N"	"1.0000"	1	"16"	"N"	"0.9999998145304007"	0	"na"	"N"	"0.9999980835441594"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.9990004998331715"	0	"na"	"MTCH1_sequences_filtered_longestORFs_mafft_prank"	"MTCH1"	581	12	"0.025674791478"	"0.033"	"Y"	2e-04	2	"63, 157"	"N"	"0.99999996765655"	0	"na"	"N"	"0.5322534343704919"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.9990004998336257"	0	"na"	""	""	"shared"
"MYCBP2"	"MYCBP2"	"MYCBP2"	"nsp12"	"MYCBP2"	"list26_COV_list4dataset2nonOrf"	"MYC binding protein 2, E3 ubiquitin protein ligase"	"Myc-bp2|PAM|Phr"	"no"	22	14037	4679	0.0308	0.25436	0.0089	0.2894	0.98184	1	0.43704	0.961245027624309	1	1	NA	NA	NA	""	"MYCBP2"	"ENSMLUG00000006495.2"	"ENSMLUT00000006549.2"	7	4440	97.7027027	0.025368008	0.3005	0.51156	0.51209	-26822.6496	-26820.87724	0.169931987	NA	NA	NA	""	"MYCBP2"	"ENSG00000005810.17"	"ENST00000612956.4"	16	276	84.7826087	0.0556612	0.0881	0.1688	0.17528	-1164.045643	-1162.450136	0.20280568	NA	NA	NA	""	"MYCBP2"	0.988058803	1	""	NA	NA	NA	""	""	12465	4155	0.04038	0.16491	0.0075	0.1869	1	1	0.24673	1	1	1	NA	NA	NA	""	"MYCBP2"	"MYCBP2_sequences_filtered_longestORFs_D358gp1_prank"	"MYCBP2_358-1"	6174	9	"0.036536439670"	"0.052"	"Y"	"0.0199"	1	"4046"	"Y"	"0.00012590724553983797"	2	"20, 4046"	"Y"	"7.794892423779286e-07"	1	"4046"	"Y"	"1.8285266951132942e-06"	0	""	"Y"	"1.5254461930603552e-21"	1	"4046"	"MYCBP2_sequences_filtered_longestORFs_D280gp2_prank"	"MYCBP2_280-2"	5479	10	"0.035837925402"	"0.031"	"Y"	0	7	"734, 735, 736, 3321, 3777, 4000, 4588"	"N"	"0.9980245232149526"	0	"na"	"Y"	"7.416232479052216e-06"	3	"1709, 2296, 3321"	"N"	"0.9970044955063907"	0	"na"	"N"	"0.7505117288341411"	0	"na"	"Duplication ok. No real PS"	""	"shared"
"NARS2"	"NARS2"	"NARS2"	"nsp8"	"NARS2"	"list24_COV_list2nonOrf"	"asparaginyl-tRNA synthetase 2, mitochondrial"	"DFNB94|SLM5|asnRS"	"no"	24	1434	478	0.39823	0.55805	0.1275	0.3202	0.28308	0.693194936708861	0.53869	1	0.56167	1	NA	NA	NA	""	"NARS2"	"ENSMLUG00000030064.1"	"ENSMLUT00000023526.1"	8	479	97.07724426	0.217431908	0.2764	0.77397	0.78946	-3577.837957	-3571.569958	0.001896019	-3577.271359	0.000733334	3	"R200, G204, A286"	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"NARS2"	0.100191532	0.958813731	""	NA	NA	NA	""	""	1203	401	0.41312	0.45039	0.1051	0.2543	0.12046	0.6023	0.23605	1	0.29853	1	NA	NA	NA	""	"NARS2"	"NARS2_sequences_filtered_longestORFs_mafft_mincov_prank"	"NARS2_all"	873	23	"0.327580620578"	"0.329"	"Y"	"0.0000"	7	"80, 88, 99, 193, 246, 408, 435"	"N"	"0.9999998411340256"	0	"na"	"N"	"0.9972664067752461"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.9704455335478727"	0	"na"	"NARS2_sequences_filtered_longestORFs_mafft_prank"	"NARS2"	541	12	"0.245685946598"	"0.250"	"N"	1	4	"10, 45, 210, 486"	"N"	"0.3264457921530277"	0	"na"	"Y"	"0.021080669666269154"	2	"212, 317"	"N"	"0.19378615920637357"	0	"na"	"N"	"0.052971565997802054"	0	"na"	""	""	"shared"
"NAT14"	"NAT14"	"NAT14"	"nsp7"	"NAT14"	"list26_COV_list4dataset2nonOrf"	"N-acetyltransferase 14 (putative)"	"KLP1"	"no"	22	621	207	0.04689	0.58635	0.0362	0.773	0.97917	1	1	1	0.99958	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"NAT14"	"ENSG00000090971.4"	"ENST00000588985.1"	18	173	92.48554913	0.485640999	0.2943	1.13529	1.55491	-1403.667641	-1368.700723	6.52e-16	-1402.496799	2.01e-16	9	"S147, L149, S150, P152, Q153, A154, R156, A157, I158"	""	NA	NA	""	NA	NA	NA	""	""	411	137	0.05402	0.27709	0.0199	0.3693	1	1	0.39089	1	0.92468	1	NA	NA	NA	""	"NAT14"	"NAT14_sequences_filtered_longestORFs_mafft_mincov_prank"	"NAT14_all"	895	22	"0.051237159962"	"0.069"	"Y"	"0.0000"	3	"566, 568, 849"	"N"	"0.9999996429397198"	0	"na"	"N"	"0.9974875609932363"	0	"na"	"Y"	"0.026569269845437157"	0	""	"Y"	"0.005782032583908955"	1	"566"	"NAT14_sequences_filtered_longestORFs_mafft_prank"	"NAT14"	277	10	"0.093943119706"	"0.101"	"N"	1	0	"na"	"N"	"0.9999993868888911"	0	"na"	"N"	"0.1984537133922413"	0	"na"	"N"	"0.9940179640540763"	0	"na"	"N"	"0.13002871087843063"	0	"na"	""	""	"shared"
"NDFIP2"	"NDFIP2"	"NDFIP2"	"orf9c"	"NDFIP2"	"list24_COV_list2nonOrf"	"Nedd4 family interacting protein 2"	"N4WBP5A"	"no"	24	1017	339	0.26963	0.48829	0.0892	0.3307	0.1407	0.466978448275862	0.22078	0.620440145985401	0.32204	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	747	249	0.22175	0.23705	0.0397	0.179	1	1	1	1	0.69866	1	NA	NA	NA	""	"NDFIP2"	"NDFIP2_sequences_filtered_longestORFs_mafft_mincov_prank"	"NDFIP2_all"	438	24	"0.318148333387"	"0.323"	"Y"	"0.0169"	0	"na"	"N"	"0.6113666644127715"	0	"na"	"N"	"0.380047992057359"	0	"na"	"N"	"0.5700677873780715"	0	"na"	"N"	"0.18068501722730326"	0	"na"	"NDFIP2_sequences_filtered_longestORFs_mafft_prank"	"NDFIP2"	392	12	"0.306558540650"	"0.282"	"N"	0.9512	3	"3, 6, 86"	"N"	"0.2918213098589899"	0	"na"	"N"	"0.11952480216458904"	0	"na"	"N"	"0.7527666447064592"	0	"na"	"N"	"0.4542988670758048"	0	"na"	"Of interest to Andrea? Looks quite variable"	""	"shared"
"NDUFAF1"	"NDUFAF1"	"NDUFAF1"	"orf9c"	"NDUFAF1"	"list24_COV_list2nonOrf"	"NADH:ubiquinone oxidoreductase complex assembly factor 1"	"CGI-65|CGI65|CIA30"	"no"	25	984	328	0.41096	0.68131	0.1695	0.4123	0.038447	0.187368291139241	0.10122	0.37114	0.11757	0.628672916666667	19.079	1.7727	6	"74_S_0.952,91_I_0.910,178_T_0.906,179_R_0.900,198_M_0.919,275_P_0.934"	"NDUFAF1"	"ENSMLUG00000001623.1"	"ENSMLUT00000001622.1"	14	328	96.34146341	0.234797941	0.2964	1.11821	1.11923	-3070.494797	-3070.184718	0.733389016	NA	NA	NA	""	"NDUFAF1"	"ENSG00000137806.8"	"ENST00000558719.1"	18	191	100	0.673846993	0.1447	0.60117	0.61052	-1423.781138	-1420.81047	0.051269051	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	828	276	0.51821	0.49325	0.1357	0.2619	0.024753	0.211775666666667	0.078772	0.583215769230769	0.080114	0.7009975	17.973	2.23814	3	"67_S_0.970,119_T_0.910,170_M_0.956"	"NDUFAF1"	"NDUFAF1_sequences_filtered_longestORFs_mafft_mincov_prank"	"NDUFAF1_all"	450	26	"0.378088629476"	"0.344"	"N"	"0.7905"	3	"28, 267, 293"	"N"	"0.05031251612356678"	0	"na"	"Y"	"0.0038219225107270363"	3	"9, 179, 261"	"N"	"0.09856884903487213"	0	"na"	"Y"	"0.006929275615721499"	1	"9"	"NDUFAF1_sequences_filtered_longestORFs_mafft_prank"	"NDUFAF1"	340	12	"0.313655866051"	"0.283"	"N"	0.228	6	"25, 38, 59, 118, 180, 234"	"N"	"0.9999979631704998"	0	"na"	"N"	"0.980061480187931"	0	"na"	"N"	"1.0"	0	"na"	"N"	"1.0"	0	"na"	""	""	"shared"
"NDUFAF2"	"NDUFAF2"	"NDUFAF2"	"nsp7"	"NDUFAF2"	"list24_COV_list2nonOrf"	"NADH:ubiquinone oxidoreductase complex assembly factor 2"	"B17.2L|MMTN|NDUFA12L|mimitin"	"yes"	24	510	170	0.54117	0.76264	0.2107	0.3894	8.7449e-05	0.00198046264705882	0.00044116	0.00707694166666667	0.00045325	0.0102647794117647	4.784	6.9349	5	"10_A_0.931,37_Q_0.983,94_-_0.973,98_-_0.998,106_-_0.967"	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"NDUFAF2"	0.165924363	1	""	NA	NA	NA	""	""	435	145	0.56512	0.68089	0.1926	0.3408	0.00018537	0.005097675	0.00053012	0.0145783	0.00078464	0.0248221346153846	3.157	10.47691	4	"47_I_0.913,77_-_0.988,81_-_0.999,87_-_0.970"	"NDUFAF2"	"NDUFAF2_sequences_filtered_longestORFs_mafft_mincov_prank"	"NDUFAF2_all"	248	23	"0.631156540650"	"0.556"	"Y"	"0.0000"	8	"26, 53, 111, 142, 154, 155, 162, 234"	"Y"	"3.620174373133328e-05"	4	"53, 111, 150, 154"	"Y"	"4.768160182666211e-06"	4	"53, 111, 150, 154"	"Y"	"1.0079569546030942e-05"	2	"150, 154"	"Y"	"1.872165254167919e-07"	5	"26, 53, 150, 154, 185"	"NDUFAF2_sequences_filtered_longestORFs_mafft_prank"	"NDUFAF2"	255	12	"0.480516895624"	"0.440"	"N"	1	2	"143, 189"	"N"	"0.7654496880176566"	0	"na"	"N"	"0.6815024673967645"	0	"na"	"N"	"0.33420523455571843"	0	"na"	"N"	"0.09594309727222568"	0	"na"	""	""	"shared"
"NDUFB9"	"NDUFB9"	"NDUFB9"	"orf9c"	"NDUFB9"	"list26_COV_list4dataset2nonOrf"	"NADH:ubiquinone oxidoreductase subunit B9"	"B22|CI-B22|LYRM3|UQOR22"	"yes"	24	540	180	0.29487	0.61954	0.1254	0.4252	0.0005814	0.00771858620689655	0.0024264	0.0253382027027027	0.0030169	0.041482375	5.154	4.34856	4	"4_-_0.959,8_-_0.995,74_R_0.976,179_V_0.987"	"NDUFB9"	"ENSMLUG00000003765.2"	"ENSMLUT00000003764.2"	10	180	96.66666667	0.108088134	0.4424	1.24592	1.24085	-1570.65544	-1567.125319	0.02930137	-1569.387372	0.033420532	1	"I150"	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"NDUFB9"	3.99e-05	0.005151697	"NADH:ubiquinone oxidoreductase subunit B9"	NA	NA	NA	""	"The protein encoded by this gene is a subunit of the mitochondrial oxidative phosphorylation complex I (nicotinamide adenine dinucleotide: ubiquinone oxidoreductase). Complex I is localized to the inner mitochondrial membrane and functions to dehydrogenate nicotinamide adenine dinucleotide and to shuttle electrons to coenzyme Q. Complex I deficiency is the most common defect found in oxidative phosphorylation disorders and results in a range of conditions, including lethal neonatal disease, hypertrophic cardiomyopathy, liver disease, and adult-onset neurodegenerative disorders. "	420	140	0.27997	0.39454	0.0798	0.2849	0.068983	0.402400833333333	0.18325	0.979878472222222	0.19193	1	7.758	3.2472	3	"70_L_0.964,72_N_0.951,139_V_0.942"	"NDUFB9"	"NDUFB9_sequences_filtered_longestORFs_mafft_mincov_prank"	"NDUFB9_all"	939	25	"0.327075612351"	"0.329"	"Y"	"0.0000"	8	"264, 271, 279, 296, 340, 368, 422, 777"	"N"	"0.2672952783601943"	0	"na"	"Y"	"0.004655447162966287"	3	"270, 340, 777"	"Y"	"0.0359006456130128"	0	""	"Y"	"0.00036705458059481806"	1	"777"	"NDUFB9_sequences_filtered_longestORFs_mafft_prank"	"NDUFB9"	179	13	"0.127899789326"	"0.123"	"N"	0.461	2	"147, 179"	"N"	"0.9999998990183536"	0	"na"	"N"	"0.08365571153288943"	0	"na"	"N"	"0.967538559589127"	0	"na"	"N"	"0.5015760690660281"	0	"na"	""	""	"shared"
"NEK9"	"NEK9"	"NEK9"	"nsp9"	"NEK9"	"list24_COV_list2nonOrf"	"NIMA related kinase 9"	"APUG|LCCS10|NC|NERCC|NERCC1"	"no"	24	2955	985	0.10566	0.27705	0.0265	0.2509	1	1	1	1	1	1	NA	NA	NA	""	"NEK9"	"ENSMLUG00000010541.2"	"ENSMLUT00000010565.2"	9	978	90.08179959	0.068599531	0.2558	0.49516	0.4948	-5775.797711	-5771.999836	0.02241836	-5774.769078	0.018602691	3	"A34, G35, S28"	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"NEK9"	0.368858038	1	""	NA	NA	NA	""	""	2502	834	0.11821	0.19585	0.0207	0.1755	1	1	1	1	1	1	NA	NA	NA	""	"NEK9"	"NEK9_sequences_filtered_longestORFs_mafft_mincov_prank"	"NEK9_all"	1091	24	"0.082369224818"	"0.083"	"N"	"0.9698"	1	"371"	"N"	"0.9999988128772882"	0	"na"	"N"	"0.11248384117876256"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.5488116360938269"	0	"na"	"NEK9_sequences_filtered_longestORFs_mafft_prank"	"NEK9"	1304	12	"0.105241457601"	"0.107"	"Y"	0	2	"1229, 1301"	"N"	"0.9289259680065098"	0	"na"	"Y"	"0.0004107944994979139"	5	"198, 454, 763, 1210, 1229"	"N"	"0.87197022613315"	0	"na"	"N"	"0.42485812046202354"	0	"na"	""	""	"shared"
"NEU1"	"NEU1"	"NEU1"	"orf8"	"NEU1"	"list23_COV_list1orf"	"neuraminidase 1"	"NANH|NEU|SIAL1"	"no"	23	1251	417	0.14615	0.50214	0.0634	0.4336	1	1	1	1	0.80574	1	NA	NA	NA	""	"NEU1"	"ENSMLUG00000004882.2"	"ENSMLUT00000004881.2"	12	417	83.45323741	0.09628246	0.4298	1.22209	1.23249	-3224.358725	-3218.354531	0.002468378	-3221.193981	0.017170129	2	"V115, G27"	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"NEU1"	0.093714705	0.922593508	""	NA	NA	NA	""	""	873	291	0.11676	0.25249	0.0268	0.2295	1	1	1	1	0.99982	1	NA	NA	NA	""	"NEU1"	"NEU1_sequences_filtered_longestORFs_mafft_mincov_prank"	"NEU1_all"	592	23	"na"	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"NEU1_sequences_filtered_longestORFs_mafft_prank"	"NEU1"	656	12	"0.153652799692"	"0.140"	"Y"	0	3	"134, 163, 173"	"N"	"0.9999992702499119"	0	"na"	"Y"	"0.008246702419223753"	2	"135, 299"	"N"	"1.0"	0	"na"	"N"	"0.0704395770339975"	0	"na"	""	""	"shared"
"NGDN"	"NGDN"	"NGDN"	"nsp8"	"NGDN"	"list24_COV_list2nonOrf"	"neuroguidin"	"C14orf120|CANu1|LCP5|NGD|lpd-2"	"no"	24	948	316	0.30905	0.40311	0.0812	0.2628	0.11631	0.414623611111111	0.24592	0.657494444444444	0.28287	1	NA	NA	NA	""	"NGDN"	"ENSMLUG00000017232.2"	"ENSMLUT00000017233.2"	11	320	89.375	0.152354448	0.3111	1.03219	1.03483	-2523.840779	-2523.396709	0.64142052	NA	NA	NA	""	"NGDN"	"ENSG00000129460.15"	"ENST00000556699.1"	16	75	96	0.340887187	0.1089	0.25673	0.29094	-404.053622	-401.716208	0.096577064	NA	NA	NA	""	"NGDN"	1	1	""	NA	NA	NA	""	""	795	265	0.39216	0.31231	0.0715	0.1822	0.32061	1	0.57456	1	0.61019	1	NA	NA	NA	""	"NGDN"	"NGDN_sequences_filtered_longestORFs_mafft_mincov_prank"	"NGDN_all"	403	24	"0.196746297282"	"0.203"	"N"	"0.2357"	5	"4, 164, 257, 308, 328"	"N"	"0.9999996749607436"	0	"na"	"N"	"0.3367567017973967"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.6107912690659221"	0	"na"	"NGDN_sequences_filtered_longestORFs_mafft_prank"	"NGDN"	540	12	"0.205667666328"	"0.206"	"N"	0.885	2	"65, 74"	"N"	"0.9999970287943627"	0	"na"	"N"	"0.9990045122531841"	0	"na"	"N"	"1.0"	0	"na"	"N"	"1.0"	0	"na"	""	""	"shared"
"NGLY1"	"NGLY1"	"NGLY1"	"orf8"	"NGLY1"	"list23_COV_list1orf"	"N-glycanase 1"	"CDDG|CDG1V|PNG1|PNGase"	"no"	23	1968	656	0.28738	0.44287	0.0887	0.3087	0.22347	0.613433333333333	0.39263	0.873771965317919	0.49853	1	NA	NA	NA	""	"NGLY1"	"ENSMLUG00000001704.2"	"ENSMLUT00000001705.2"	9	615	98.69918699	0.258973023	0.2775	0.7174	0.72344	-4501.119256	-4499.937154	0.306633517	NA	NA	NA	""	"NGLY1"	"ENSG00000151092.16"	"ENST00000428257.5"	11	637	85.87127159	0.310338885	0.0885	0.23751	0.27515	-3044.408442	-3022.246211	2.37e-10	-3034.104948	1.12e-06	6	"S32, L34, L355, L36, Y38, P138"	""	NA	NA	""	NA	NA	NA	""	""	1716	572	0.31837	0.33199	0.0713	0.2238	0.48412	1	0.76538	1	0.79131	1	NA	NA	NA	""	"NGLY1"	"NGLY1_sequences_filtered_longestORFs_mafft_mincov_prank"	"NGLY1_all"	1538	24	"0.292983182049"	"0.275"	"Y"	"0.0000"	8	"44, 532, 598, 669, 1047, 1056, 1515, 1520"	"N"	"0.06149275202982891"	0	"na"	"Y"	"0.0010796041125753367"	2	"511, 525"	"N"	"0.12075398317951777"	0	"na"	"Y"	"0.03136696531192716"	2	"511, 525"	"NGLY1_sequences_filtered_longestORFs_mafft_prank"	"NGLY1"	881	11	"0.301206874793"	"0.271"	"Y"	0.0203	10	"271, 293, 296, 352, 360, 441, 467, 731, 770, 801"	"N"	"0.9999972767764821"	0	"na"	"N"	"0.21002568368470978"	0	"na"	"N"	"0.9342604735770164"	0	"na"	"N"	"0.5792622313806218"	0	"na"	""	""	"shared"
"NIN"	"NIN"	"NIN"	"nsp13"	"NIN"	"list26_COV_list4dataset2nonOrf"	"ninein"	"SCKL7"	"no"	24	6408	2136	0.30293	0.48783	0.0957	0.3158	0.76324	1	0.94107	1	0.95656	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"NIN"	"ENSG00000100503.23"	"ENST00000245441.9"	18	2134	98.87535145	0.202455774	0.1696	0.44163	0.44404	-14232.14747	-14231.53816	0.543722648	NA	NA	NA	""	"NIN"	0.00019421	0.016491925	"ninein"	NA	NA	NA	""	"This gene encodes one of the proteins important for centrosomal function. This protein is important for positioning and anchoring the microtubules minus-ends in epithelial cells. Localization of this protein to the centrosome requires three leucine zippers in the central coiled-coil domain. "	5415	1805	0.30366	0.31705	0.0633	0.2084	0.36495	1	0.66019	1	0.70868	1	NA	NA	NA	""	"NIN"	"NIN_sequences_filtered_longestORFs_mafft_mincov_prank"	"NIN_all"	10697	22	"0.211191421675"	"0.224"	"N"	"0.9199"	18	"870, 997, 1333, 1339, 1397, 1493, 8963, 9014, 9230, 9320, 9441, 9530, 9534, 9538, 9540, 9605, 9744, 10042"	"N"	"0.9999960651953295"	0	"na"	"N"	"0.8519489054018843"	0	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"NIN_sequences_filtered_longestORFs_mafft_prank"	"NIN"	4996	12	"0.261282750429"	"0.277"	"Y"	0	17	"799, 1201, 2720, 2848, 3016, 3075, 3253, 3304, 3433, 3600, 3670, 3674, 3711, 3736, 4477, 4809, 4927"	"N"	"0.9999998423954946"	0	"na"	"N"	"0.9997736992394146"	0	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"na explained from aln. 83 seq total for only 12 sp"	""	"shared"
"NINL"	"NINL"	"NINL"	"nsp13"	"NINL"	"list26_COV_list4dataset2nonOrf"	"ninein like"	"NLP"	"yes"	24	4224	1408	0.45757	1.05338	0.2658	0.581	2.0207e-05	0.000518646333333333	1.5834e-05	0.00051869125	0.00024343	0.00624803666666667	6.599	2.58396	12	"703_D_0.929,708_R_0.943,802_G_0.942,829_R_0.939,848_R_0.902,871_P_0.938,875_G_0.920,903_A_0.949,938_L_0.942,981_R_0.908,1111_A_0.938,1185_S_0.953"	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"NINL"	"ENSG00000101004.14"	"ENST00000422516.5"	13	1034	96.03481625	0.288848328	0.1913	0.51021	0.51842	-6660.290583	-6657.570979	0.065900846	NA	NA	NA	""	"NINL"	0.613096766	1	""	NA	NA	NA	""	""	2832	944	0.53526	0.53112	0.1438	0.2686	3.1176e-08	3.00069e-06	1.1293e-07	1.35029125e-05	2.1842e-07	2.1022925e-05	12.273	3.41291	9	"568_S_0.942,603_A_0.911,618_T_0.953,625_L_0.992,632_P_0.926,654_A_0.950,687_G_0.992,713_L_0.956,792_S_0.996"	"NINL"	"NINL_sequences_filtered_longestORFs_mafft_mincov_prank"	"NINL_all"	2604	23	"0.427852487352"	"0.390"	"N"	"0.1028"	40	"340, 592, 637, 639, 644, 692, 840, 1042, 1073, 1096, 1643, 1674, 1687, 1751, 1756, 1782, 1793, 1801, 1806, 1817, 1823, 1837, 1842, 1853, 1898, 1907, 1924, 1977, 2017, 2028, 2118, 2155, 2166, 2220, 2230, 2237, 2247, 2463, 2485, 2536"	"N"	"0.9999971376751129"	0	"na"	"Y"	"0.031103287956552407"	0	""	"N"	"0.9990004998331715"	0	"na"	"Y"	"0.0004429737698240615"	0	""	"NINL_sequences_filtered_longestORFs_mafft_prank"	"NINL"	1320	9	"0.291186931610"	"0.330"	"N"	0.9073	9	"66, 178, 186, 398, 475, 557, 679, 750, 896"	"N"	"0.9999973543625383"	0	"na"	"N"	"0.9984432776236783"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.8286147072325962"	0	"na"	""	""	"shared"
"NLRX1"	"NLRX1"	"NLRX1"	"orf9c"	"NLRX1"	"list24_COV_list2nonOrf"	"NLR family member X1"	"CLR11.3|DLNB26|NOD26|NOD5|NOD9"	"no"	24	2955	985	0.17885	0.73839	0.1083	0.6055	0.23405	0.630134615384615	0.046322	0.216022108433735	0.50568	1	8.98	1.3302	1	"143_Q_0.900"	"NLRX1"	"ENSMLUG00000000471.2"	"ENSMLUT00000000472.2"	10	976	88.7295082	0.119503218	0.5895	1.51145	1.51495	-8200.057676	-8199.671454	0.679619633	NA	NA	NA	""	"NLRX1"	"ENSG00000160703.15"	"ENST00000409265.8"	17	976	95.79918033	0.175988852	0.2133	0.5628	0.58202	-6658.028812	-6655.525082	0.081779392	NA	NA	NA	""	"NLRX1"	1	1	""	NA	NA	NA	""	""	2133	711	0.16764	0.40048	0.0569	0.3397	0.24233	0.992521808510638	0.22746	1	0.50582	1	NA	NA	NA	""	"NLRX1"	"NLRX1_sequences_filtered_longestORFs_mafft_mincov_prank"	"NLRX1_all"	1342	24	"0.191851581154"	"0.158"	"N"	"0.1076"	14	"18, 19, 20, 22, 40, 61, 64, 66, 71, 151, 291, 343, 1149, 1159"	"N"	"0.9999996792794777"	0	"na"	"Y"	"0.016986494811331982"	5	"5, 64, 68, 151, 341"	"N"	"0.9960079893431798"	0	"na"	"Y"	"0.0033193045197521024"	0	""	"NLRX1_sequences_filtered_longestORFs_mafft_prank"	"NLRX1"	1159	12	"0.174592688656"	"0.141"	"Y"	0	10	"187, 222, 224, 375, 430, 860, 946, 978, 1142, 1147"	"N"	"0.9999986254943348"	0	"na"	"N"	"0.738781808329577"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.9665715046378442"	0	"na"	""	""	"shared"
"NOL10"	"NOL10"	"NOL10"	"nsp8"	"NOL10"	"list24_COV_list2nonOrf"	"nucleolar protein 10"	"PQBP5"	"no"	24	2067	689	0.09925	0.40974	0.0388	0.3911	1	1	1	1	1	1	NA	NA	NA	""	"NOL10"	"ENSMLUG00000012309.2"	"ENSMLUT00000012324.2"	7	689	91.5820029	0.04711	0.5473	0.67759	0.67845	-4316.213081	-4314.723413	0.225447492	NA	NA	NA	""	"NOL10"	"ENSG00000115761.15"	"ENST00000538384.5"	16	663	90.79939668	0.079673673	0.1878	0.34335	0.3476	-3573.778847	-3573.123958	0.519499724	NA	NA	NA	""	"NOL10"	0.945985014	1	""	NA	NA	NA	""	""	1728	576	0.1001	0.26531	0.0261	0.2603	1	1	1	1	1	1	NA	NA	NA	""	"NOL10"	"NOL10_sequences_filtered_longestORFs_mafft_mincov_prank"	"NOL10_all"	939	24	"0.078755544009"	"0.073"	"Y"	"0.0000"	2	"353, 403"	"N"	"0.9999863641398594"	0	"na"	"N"	"0.9999998543389772"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.9970044955036704"	0	"na"	"NOL10_sequences_filtered_longestORFs_mafft_prank"	"NOL10"	729	12	"0.063202933312"	"0.060"	"N"	0.2658	3	"154, 215, 703"	"N"	"0.999999928002583"	0	"na"	"Y"	"4.5613424449856195e-06"	5	"215, 495, 559, 703, 723"	"N"	"1.0"	0	"na"	"N"	"0.36240242983237164"	0	"na"	""	""	"shared"
"NPC2"	"NPC2"	"NPC2"	"orf8"	"NPC2"	"list23_COV_list1orf"	"NPC intracellular cholesterol transporter 2"	"EDDM1|HE1"	"no"	24	465	155	0.28349	0.66431	0.128	0.4516	0.073109	0.29943579787234	0.12039	0.411370796460177	0.20056	0.908418823529412	16.901	1.89121	3	"7_T_0.975,12_A_0.902,134_R_0.915"	"NPC2"	"ENSMLUG00000004558.2"	"ENSMLUT00000004553.2"	8	188	80.31914894	0.409691319	0.3524	1.11719	1.11731	-1372.452736	-1372.452748	0.999988	NA	NA	NA	""	"NPC2"	"ENSG00000119655.10"	"ENST00000555592.1"	19	122	100	0.109616622	0.2467	0.53262	0.57178	-845.865194	-844.02272	0.158424997	NA	NA	NA	""	"NPC2"	1	1	""	NA	NA	NA	""	""	363	121	0.33817	0.51879	0.1093	0.3233	0.00058009	0.01212255	0.002644	0.0502846666666667	0.0026863	0.0568685526315789	12.619	3.38544	4	"3_T_0.996,56_V_0.961,103_R_0.971,117_Q_0.953"	"NPC2"	"NPC2_sequences_filtered_longestORFs_mafft_mincov_prank"	"NPC2_all"	780	24	"0.508028059871"	"0.457"	"Y"	"0.0001"	10	"25, 39, 65, 82, 83, 129, 138, 146, 544, 719"	"N"	"0.2328510019315863"	0	"na"	"N"	"0.057719371839172945"	0	"na"	"Y"	"0.004719747389456752"	0	""	"Y"	"0.001593217057936894"	3	"65, 138, 545"	"NPC2_sequences_filtered_longestORFs_mafft_prank"	"NPC2"	165	12	"0.315560158487"	"0.305"	"N"	0.5947	2	"24, 127"	"N"	"0.9999973983449045"	0	"na"	"N"	"0.9965413927524406"	0	"na"	"N"	"1.0"	0	"na"	"N"	"1.0"	0	"na"	""	""	"shared"
"NPTX1"	"NPTX1"	"NPTX1"	"orf8"	"NPTX1"	"list23_COV_list1orf"	"neuronal pentraxin 1"	"NP1"	"no"	23	1299	433	0.01642	0.33748	0.0122	0.7454	1	1	1	1	0.99999	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"NPTX1"	"ENSG00000171246.5"	"ENST00000306773.4"	14	433	75.75057737	0.036985109	0.1275	0.23805	0.23805	-1667.229725	-1667.230101	0.999624071	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	813	271	0.0123	0.14899	0.0045	0.3654	1	1	1	1	0.99926	1	NA	NA	NA	""	"NPTX1"	"NPTX1_sequences_filtered_longestORFs_mafft_mincov_prank"	"NPTX1_all"	1410	22	"0.026765310295"	"0.025"	"N"	"0.8825"	4	"1047, 1059, 1266, 1356"	"N"	"0.999999757519647"	0	"na"	"N"	"0.9987352907898548"	0	"na"	"N"	"0.9445940693675817"	0	"na"	"N"	"0.9990004998331715"	0	"na"	"NPTX1_sequences_filtered_longestORFs_mafft_prank"	"NPTX1"	1097	10	"0.023105165192"	"0.040"	"N"	1	3	"828, 836, 1039"	"N"	"0.999999886609664"	0	"na"	"N"	"0.4011492862110374"	0	"na"	"N"	"1.0"	0	"na"	"Y"	"2.8919339494199573e-05"	1	"237"	"Mix of 2 genes. Was not automatically separated because less than 8 sp on one side. (which makes sense from bat seq)."	""	"shared"
"NSD2"	"NSD2"	"WHSC1"	"nsp8"	"WHSC1"	"list26_COV_list4dataset2nonOrf"	"nuclear receptor binding SET domain protein 2"	"KMT3F|KMT3G|MMSET|REIIBP|TRX5|WHS|WHSC1"	"no"	23	4113	1371	0.09001	0.36185	0.0315	0.3496	0.27689	0.687759032258065	0.27841	0.719381543624161	0.55646	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"NSD2"	"ENSG00000109685.17"	"ENST00000436793.5"	18	274	92.33576642	0.070500844	0.1484	0.33157	0.33157	-1552.440796	-1552.44109	0.999706043	NA	NA	NA	""	"WHSC1"	0.129384661	1	""	NA	NA	NA	""	""	3228	1076	0.09064	0.17965	0.0171	0.1889	0.25303	1	0.34824	1	0.52368	1	NA	NA	NA	""	"NSD2"	"NSD2_sequences_filtered_longestORFs_mafft_mincov_prank"	"NSD2_all"	1918	23	"0.113995429131"	"0.106"	"N"	"1.0000"	5	"394, 543, 760, 1821, 1865"	"N"	"0.9999997044524643"	0	"na"	"Y"	"1.2044331264821216e-05"	8	"161, 380, 394, 413, 422, 423, 543, 957"	"N"	"0.9990004998331715"	0	"na"	"N"	"0.22672895630598963"	0	"na"	"NSD2_sequences_filtered_longestORFs_mafft_prank"	"NSD2"	1967	11	"0.148197094993"	"0.115"	"N"	1	0	"na"	"N"	"0.9999995612362053"	0	"na"	"Y"	"0.029190967734365886"	0	""	"N"	"1.0"	0	"na"	"Y"	"0.03699398304371079"	1	"603"	""	""	"shared"
"NUP210"	"NUP210"	"NUP210"	"nsp4"	"NUP210"	"list26_COV_list4dataset2nonOrf"	"nucleoporin 210"	"GP210|POM210"	"no"	24	5664	1888	0.11937	0.66487	0.0766	0.642	0.011543	0.081942	0.014496	0.09966	1	1	0.115	6.99199	5	"915_R_0.990,930_A_0.905,1445_V_0.951,1550_V_0.929,1755_A_0.900"	"NUP210"	"ENSMLUG00000008874.2"	"ENSMLUT00000008938.2"	10	1835	98.03814714	0.163033289	0.4134	1.45189	1.46856	-17586.2163	-17576.58963	6.59e-05	-17581.93687	0.001074556	NA	""	"NUP210"	"ENSG00000132182.11"	"ENST00000254508.6"	17	1888	89.77754237	0.12209371	0.221	0.54216	0.54545	-11598.07978	-11595.38623	0.067640051	NA	NA	NA	""	"NUP210"	0.735410013	1	""	NA	NA	NA	""	""	4107	1369	0.11458	0.31591	0.036	0.3142	1	1	1	1	1	1	NA	NA	NA	""	"NUP210"	"NUP210_sequences_filtered_longestORFs_mafft_mincov_prank"	"NUP210_all"	3638	21	"0.168684208369"	"0.126"	"N"	"0.2227"	16	"165, 377, 603, 682, 754, 911, 932, 2372, 2434, 2715, 2778, 2930, 3035, 3053, 3118, 3466"	"N"	"0.9999984922953896"	0	"na"	"Y"	"0.000560055585517515"	1	"1061"	"N"	"nan"	0	"na"	"Y"	"2.1210801528009748e-05"	1	"1061"	"NUP210_sequences_filtered_longestORFs_mafft_prank"	"NUP210"	2228	12	"0.177550614839"	"0.172"	"N"	0.4556	0	"na"	"N"	"0.9999997886771094"	0	"na"	"Y"	"8.160634990754697e-05"	3	"658, 2019, 2113"	"N"	"1.0"	0	"na"	"Y"	"4.6409796015133775e-05"	0	""	""	""	"shared"
"NUP214"	"NUP214"	"NUP214"	"nsp9"	"NUP214"	"list24_COV_list2nonOrf"	"nucleoporin 214"	"CAIN|CAN"	"no"	24	6297	2099	0.28183	0.55213	0.1001	0.355	0.24047	0.641787248322148	0.29089	0.7281	0.6197	1	NA	NA	NA	""	"NUP214"	"ENSMLUG00000004875.2"	"ENSMLUT00000004890.2"	9	2067	91.43686502	0.183714759	0.4956	1.60598	1.85946	-19714.55251	-19660.54198	3.5e-24	-19710.52044	1.56e-23	9	"Q1665, G1682, Q1683, Q1684, L1685, T1281, V1675, S1678, A1679"	"NUP214"	"ENSG00000126883.16"	"ENST00000451030.5"	15	1520	92.96052632	0.285515801	0.1529	0.50526	0.50819	-9870.347356	-9867.143151	0.040591159	-9870.284533	0.01219178	NA	""	"NUP214"	1	1	""	NA	NA	NA	""	""	5196	1732	0.35056	0.35951	0.076	0.2168	0.84904	1	0.86724	1	0.98284	1	NA	NA	NA	""	"NUP214"	"NUP214_sequences_filtered_longestORFs_mafft_mincov_prank"	"NUP214_all"	3953	24	"0.292847695065"	"0.296"	"N"	"0.8924"	19	"190, 753, 754, 1093, 1207, 1303, 1351, 1440, 1479, 1585, 1747, 1764, 1813, 1871, 1981, 2016, 2066, 2081, 2489"	"N"	"0.9999922165455296"	0	"na"	"Y"	"1.1777447939908644e-06"	1	"753"	"Y"	"0.00045875236651099906"	0	""	"na"	"na"	0	"na"	"NUP214_sequences_filtered_longestORFs_mafft_prank"	"NUP214"	2724	12	"0.210062800297"	"0.217"	"Y"	0	25	"390, 481, 516, 521, 750, 942, 972, 997, 1022, 1366, 1490, 1531, 1546, 1647, 1663, 1690, 1712, 1731, 1739, 1740, 1749, 1764, 1873, 2079, 2398"	"N"	"0.999970409340112"	0	"na"	"N"	"0.1098127018402205"	0	"na"	"Y"	"8.395727754465127e-32"	0	""	"Y"	"7.202171687694045e-28"	0	""	"Interesting One"	""	"shared"
"NUP54"	"NUP54"	"NUP54"	"nsp9"	"NUP54"	"list24_COV_list2nonOrf"	"nucleoporin 54"	"-"	"no"	24	1530	510	0.03565	0.21623	0.009	0.2532	1	1	0.97422	1	1	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"NUP54"	"ENSG00000138750.14"	"ENST00000513352.1"	19	85	96.47058824	0.108626324	0.0807	0.15464	0.18092	-394.365771	-392.927146	0.237253758	NA	NA	NA	""	"NUP54"	1	1	""	NA	NA	NA	""	""	1380	460	0.04403	0.15203	0.0079	0.1796	1	1	1	1	0.9998	1	NA	NA	NA	""	"NUP54"	"NUP54_sequences_filtered_longestORFs_mafft_mincov_prank"	"NUP54_all"	1305	24	"0.074379806320"	"0.066"	"N"	"1.0000"	4	"22, 796, 857, 978"	"N"	"0.9643347227277823"	0	"na"	"N"	"0.08374034939195321"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.40171998009784604"	0	"na"	"NUP54_sequences_filtered_longestORFs_mafft_prank"	"NUP54"	916	12	"0.108833344666"	"0.099"	"N"	1	0	"na"	"N"	"0.9999996841821074"	0	"na"	"N"	"0.941432132856242"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.912105149544586"	0	"na"	""	""	"shared"
"NUP58"	"NUP58"	"NUPL1"	"nsp9"	"NUPL1"	"list24_COV_list2nonOrf"	"spartin"	"SPG20|TAHCCP1"	"no"	24	1803	601	0.11458	0.28658	0.03	0.2614	0.19242	0.561057894736842	0.34495	0.804883333333333	0.41534	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"NUPL1"	1	1	""	NA	NA	NA	""	""	1566	522	0.11964	0.18355	0.0208	0.1736	1	1	1	1	0.99977	1	NA	NA	NA	""	"NUP58"	"NUP58_sequences_filtered_longestORFs_mafft_mincov_prank_part2_prank"	"NUP58_all_part2"	789	23	"0.133796894965"	"0.119"	"Y"	"0.0000"	5	"4, 27, 749, 785, 786"	"Y"	"2.009975645682337e-10"	3	"749, 785, 786"	"Y"	"5.342817945735711e-19"	3	"749, 785, 786"	"Y"	"2.0243847696632473e-09"	3	"749, 785, 786"	"Y"	"2.614364680334922e-12"	4	"34, 749, 785, 786"	"NUP58_sequences_filtered_longestORFs_mafft_prank"	"NUP58"	895	12	"0.132254962191"	"0.137"	"Y"	0	4	"119, 300, 493, 494"	"N"	"0.6561255751539898"	0	"na"	"N"	"0.0912602799029464"	0	"na"	"N"	"0.7053931302698415"	0	"na"	"N"	"0.16316391010000333"	0	"na"	""	""	"shared"
"NUP62"	"NUP62"	"NUP62"	"nsp9"	"NUP62"	"list24_COV_list2nonOrf"	"nucleoporin 62"	"IBSN|SNDI|p62"	"no"	24	1599	533	0.18558	0.8424	0.1273	0.6861	0.12962	0.437751754385965	0.1473	0.4725875	0.52476	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	996	332	0.19473	0.37067	0.061	0.3134	0.36086	1	0.49174	1	0.6569	1	NA	NA	NA	""	"NUP62"	"NUP62_sequences_filtered_longestORFs_mafft_mincov_prank"	"NUP62_all"	732	24	"0.260507976485"	"0.210"	"Y"	"0.0000"	5	"165, 234, 299, 306, 552"	"N"	"0.9999998184657835"	0	"na"	"N"	"0.8330241635844272"	0	"na"	"N"	"0.9990004998331715"	0	"na"	"N"	"0.4766370400829789"	0	"na"	"NUP62_sequences_filtered_longestORFs_mafft_prank"	"NUP62"	580	12	"0.235365629051"	"0.174"	"Y"	0	10	"48, 115, 120, 218, 265, 397, 398, 430, 530, 554"	"N"	"0.9999989763287668"	0	"na"	"N"	"0.9999982760524598"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.7921535735248961"	0	"na"	"Recent duplications in the Myo. Quite variable for PS"	""	"shared"
"NUP88"	"NUP88"	"NUP88"	"nsp9"	"NUP88"	"list24_COV_list2nonOrf"	"nucleoporin 88"	"-"	"no"	24	2232	744	0.19123	0.48813	0.0732	0.3826	0.061255	0.259155769230769	0.052061	0.235805705882353	0.25163	1	0.57	4.54814	0	"noneOver_0.9"	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"NUP88"	0.811881094	1	""	NA	NA	NA	""	""	1824	608	0.1829	0.32802	0.0493	0.2694	1	1	1	1	0.99981	1	NA	NA	NA	""	"NUP88"	"NUP88_sequences_filtered_longestORFs_mafft_mincov_prank"	"NUP88_all"	893	24	"0.171479668096"	"0.169"	"N"	"0.6253"	9	"42, 156, 251, 293, 644, 696, 779, 812, 876"	"N"	"0.9999992328360564"	0	"na"	"N"	"0.13278352449163852"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.2602792983786746"	0	"na"	"NUP88_sequences_filtered_longestORFs_mafft_prank"	"NUP88"	900	12	"0.144093639598"	"0.145"	"N"	0.9989	2	"45, 421"	"N"	"0.9999997299401366"	0	"na"	"N"	"0.06441114316564217"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.15755195533034877"	0	"na"	""	""	"shared"
"NUP98"	"NUP98"	"NUP98"	"orf6"	"NUP98"	"list23_COV_list1orf"	"nucleoporin 98"	"ADIR2|NUP196|NUP96"	"no"	36	5409	1803	0.17017	0.44274	0.0618	0.3631	1	1	0.034521	0.179862635135135	1	1	0.05	999	0	"noneOver_0.9"	"NUP98"	"ENSMLUG00000013592.2"	"ENSMLUT00000013607.2"	10	1801	98.33425875	0.118413081	0.2018	0.53296	0.53296	-12054.95795	-12054.95796	0.999997	NA	NA	NA	""	"NUP98"	"ENSG00000110713.15"	"ENST00000359171.8"	11	1818	99.17491749	0.154326086	0.1011	0.215	0.21521	-9759.166224	-9758.903985	0.769327133	NA	NA	NA	""	"NUP98"	1	1	""	NA	NA	NA	""	""	4641	1547	0.1932	0.30858	0.0477	0.2471	1	1	1	1	1	1	NA	NA	NA	""	"NUP98"	"NUP98_sequences_filtered_longestORFs_mafft_mincov_prank"	"NUP98_all"	5910	34	"na"	"na"	"Y"	"0.0000"	18	"22, 132, 165, 331, 1153, 1154, 1487, 1507, 1913, 2035, 2051, 2082, 2163, 2598, 2599, 2839, 3514, 4112"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"NUP98_sequences_filtered_longestORFs_mafft_prank"	"NUP98"	1981	12	"0.140604995886"	"0.138"	"N"	0.8774	4	"362, 861, 1046, 1619"	"N"	"0.999997564956411"	0	"na"	"N"	"0.09109567087173494"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.8833798408829309"	0	"na"	""	""	"shared"
"NUTF2"	"NUTF2"	"NUTF2"	"nsp15"	"NUTF2"	"list26_COV_list4dataset2nonOrf"	"nuclear transport factor 2"	"NTF-2|NTF2|PP15"	"no"	23	384	128	0.0166	0.17861	0.0036	0.2174	1	1	1	1	0.99982	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	324	108	1e-04	0.05343	0	0.0754	1	1	1	1	0.99983	1	NA	NA	NA	""	"NUTF2"	"NUTF2_sequences_filtered_longestORFs_mafft_mincov_prank"	"NUTF2_all"	493	24	"0.351664349637"	"0.321"	"Y"	"0.0291"	8	"280, 282, 284, 285, 324, 339, 425, 473"	"N"	"0.9208057350375947"	0	"na"	"N"	"0.9995795781363376"	0	"na"	"N"	"0.9579113900669156"	0	"na"	"N"	"0.9880717128617615"	0	"na"	"NUTF2_sequences_filtered_longestORFs_mafft_prank"	"NUTF2"	127	12	"0.098253734861"	"0.086"	"N"	0.3257	0	"na"	"N"	"0.9999954361577017"	0	"na"	"N"	"0.997820688169417"	0	"na"	"N"	"1.0"	0	"na"	"N"	"1.0"	0	"na"	""	""	"shared"
"OS9"	"OS9"	"OS9"	"orf8"	"OS9"	"list23_COV_list1orf"	"OS9, endoplasmic reticulum lectin"	"ERLEC2|OS-9"	"no"	24	2016	672	0.17831	0.39211	0.0555	0.3112	0.376	0.851529411764706	0.528	1	0.72735	1	NA	NA	NA	""	"OS9"	"ENSMLUG00000005905.2"	"ENSMLUT00000005907.2"	12	668	95.20958084	0.19047821	0.2765	0.91422	0.92454	-5483.73567	-5480.367642	0.034457521	-5483.01591	0.021367878	2	"L18, S348"	"OS9"	"ENSG00000135506.15"	"ENST00000552285.5"	19	613	93.31158238	0.129807199	0.1537	0.40194	0.40256	-3659.214703	-3658.398313	0.442024486	NA	NA	NA	""	"OS9"	0.011396312	0.286659061	""	NA	NA	NA	""	""	1626	542	0.21531	0.25539	0.0419	0.1948	1	1	1	1	1	1	NA	NA	NA	""	"OS9"	"OS9_sequences_filtered_longestORFs_mafft_mincov_prank"	"OS9_all"	2383	24	"0.192502708990"	"0.179"	"N"	"0.1109"	8	"7, 53, 634, 675, 1505, 1514, 1853, 2349"	"N"	"0.9999995736071469"	0	"na"	"N"	"0.1173463127809913"	0	"na"	"N"	"1.0"	0	"na"	"na"	"na"	0	"na"	"OS9_sequences_filtered_longestORFs_mafft_prank"	"OS9"	727	12	"0.221563948134"	"0.211"	"N"	0.2167	4	"198, 333, 340, 465"	"N"	"0.9999988034940425"	0	"na"	"N"	"0.18063582562350763"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.18544443195606533"	0	"na"	""	""	"shared"
"PABPC1"	"PABPC1"	"PABPC1"	"N"	"PABPC1"	"list26_COV_list4dataset2nonOrf"	"poly(A) binding protein cytoplasmic 1"	"PAB1|PABP|PABP1|PABPC2|PABPL1"	"no"	22	1920	640	0.25446	0.48967	0.0895	0.3517	0.029875	0.157559931506849	0.060395	0.267265229885057	0.13375	0.686583333333333	0.624	7.12936	0	"noneOver_0.9"	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	1467	489	0.26057	0.3403	0.0636	0.2441	0.76986	1	0.93921	1	0.97767	1	NA	NA	NA	""	"PABPC1"	"PABPC1_sequences_filtered_longestORFs_D976gp1_prank"	"PABPC1_976-1"	755	14	"0.533694474655"	"0.478"	"N"	"1.0000"	0	"na"	"N"	"0.9994741259976754"	0	"na"	"N"	"0.9826334675013463"	0	"na"	"N"	"0.9665715046374047"	0	"na"	"N"	"0.9380049995304428"	0	"na"	"PABPC1_bat_select_mafft_prank"	"PABPC1"	735	12	"0.0938951370512233"	"0.093"	"N"	0.0509	2	"471, 671"	"N"	"0.972002479200044"	0	"na"	"N"	"0.609585807664959"	0	"na"	"N"	"0.7124824490892332"	0	"na"	"N"	"0.32497728220613026"	0	"na"	""	""	"shared"
"PABPC4"	"PABPC4"	"PABPC4"	"N"	"PABPC4"	"list26_COV_list4dataset2nonOrf"	"poly(A) binding protein cytoplasmic 4"	"APP-1|APP1|PABP4|iPABP"	"no"	24	1983	661	0.02748	0.22293	0.0065	0.2366	1	1	0.28405	0.724233443708609	1	1	NA	NA	NA	""	"PABPC4"	"ENSMLUG00000012068.2"	"ENSMLUT00000012071.2"	4	616	88.7987013	0.152907163	4.0876	3.43137	3.54991	-5318.31677	-5316.135205	0.112864759	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"PABPC4"	0.650870822	1	""	NA	NA	NA	""	""	1620	540	0.03302	0.14794	0.0053	0.1593	0.98714	1	0.6042	1	0.99987	1	NA	NA	NA	""	"PABPC4"	"PABPC4_sequences_filtered_longestORFs_D1202gp2_prank"	"PABPC4_1202-2"	1303	24	"0.086971224325"	"0.091"	"Y"	"0.0003"	6	"144, 690, 746, 770, 903, 916"	"N"	"0.9999988697124558"	0	"na"	"N"	"0.1069597779776388"	0	"na"	"Y"	"0.016490018838369237"	0	""	"N"	"0.6319152448996017"	0	"na"	"PABPC4_sequences_filtered_longestORFs_duplication_remainingsequences_prank"	"PABPC4_rem"	1601	12	"0.063778768571"	"0.068"	"Y"	0.0362	2	"20, 363"	"N"	"0.9999988545411919"	0	"na"	"N"	"0.9296422664654556"	0	"na"	"N"	"0.9990004998349886"	0	"na"	"N"	"1.0"	0	"na"	"Duplication yes. Group ok. "	""	"shared"
"PCNT"	"PCNT"	"PCNT"	"nsp13"	"PCNT"	"list26_COV_list4dataset2nonOrf"	"pericentrin"	"KEN|MOPD2|PCN|PCNT2|PCNTB|PCTN2|SCKL4"	"yes"	21	10074	3358	0.44695	1.04111	0.2557	0.5721	1.4068e-29	5.41618e-27	4.0744e-33	1.568644e-30	6.8784e-28	2.648184e-25	5.984	3.50299	36	"77_D_0.956,109_V_0.951,113_N_0.905,122_M_0.986,129_P_0.941,133_H_0.929,138_V_0.958,155_P_0.974,161_M_0.972,164_V_0.976,165_S_0.931,172_P_0.921,178_M_0.991,181_I_0.918,185_Q_0.972,189_R_0.984,202_R_0.953,207_I_0.921,217_M_0.931,599_R_0.916,638_C_0.980,650_R_0.977,769_M_0.943,1016_W_0.904,1088_R_0.991,1825_R_0.961,1935_W_0.905,1967_R_0.923,1983_R_0.968,2039_V_0.964,2136_I_0.973,2140_I_0.992,2215_R_0.988,2298_A_0.907,2377_Q_0.986,2516_R_0.935"	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"PCNT"	"ENSG00000160299.16"	"ENST00000418394.1"	18	228	96.92982456	0.251847598	0.2741	0.75182	0.75645	-1816.308178	-1815.640662	0.512981242	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	6678	2226	0.41957	0.53703	0.1291	0.3076	9.4062e-20	3.621387e-17	1.0178e-18	3.91853e-16	1.6815e-18	6.473775e-16	3.035	6.7467	23	"3_V_0.960,38_T_0.987,71_Q_0.927,75_N_0.989,78_P_0.987,82_M_1.000,91_M_0.998,100_I_0.993,104_Q_0.997,107_M_0.983,112_I_0.991,115_I_0.993,119_P_0.900,123_M_0.994,438_S_0.959,1128_I_0.991,1463_S_0.956,1487_T_0.946,1542_P_0.960,1615_I_0.978,1728_T_0.940,1759_A_0.939,2216_T_0.954"	"PCNT"	"PCNT_sequences_filtered_longestORFs_mafft_mincov_prank"	"PCNT_all"	4529	18	"0.378148780950"	"0.371"	"Y"	"0.0215"	81	"20, 83, 91, 96, 565, 588, 601, 611, 619, 694, 710, 727, 796, 803, 1015, 1092, 1190, 1241, 1255, 1278, 1316, 1336, 1358, 1401, 1459, 1482, 1564, 1614, 1636, 1637, 1647, 1649, 1661, 1667, 1685, 1691, 1692, 1698, 1718, 1735, 1779, 1852, 1908, 2013, 2014, 2111, 2113, 2561, 2564, 2703, 2805, 2899, 2921, 2963, 2970, 2999, 3001, 3007, 3011, 3040, 3084, 3102, 3140, 3151, 3162, 3245, 3271, 3349, 3412, 3424, 3602, 3881, 3894, 3914, 3918, 4023, 4122, 4219, 4269, 4392, 4434"	"N"	"0.5482488609326766"	0	"na"	"Y"	"7.094956322513417e-06"	4	"1614, 2921, 3000, 3162"	"Y"	"7.702235088396207e-06"	0	""	"Y"	"8.241573644122765e-14"	3	"611, 3000, 3162"	"PCNT_sequences_filtered_longestORFs_mafft_prank"	"PCNT"	3992	12	"0.405046328649"	"0.376"	"Y"	0.0151	12	"80, 82, 158, 381, 417, 1478, 1660, 1961, 2385, 2758, 2853, 3877"	"N"	"0.999999364496236"	0	"na"	"N"	"0.10267715781616366"	0	"na"	"N"	"1.0"	0	"na"	"Y"	"8.293819160781511e-06"	0	""	""	""	"shared"
"PCSK6"	"PCSK6"	"PCSK6"	"orf8"	"PCSK6"	"list25_COV_list3dataset2orf"	"proprotein convertase subtilisin/kexin type 6"	"PACE4|SPC4"	"no"	24	2940	980	0.08851	0.61083	0.0574	0.6487	0.044184	0.2126355	0.030184	0.165459097222222	0.30045	1	0.343	4.71921	3	"22_-_0.979,30_-_0.925,717_N_0.941"	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"PCSK6"	1	1	""	NA	NA	NA	""	""	1899	633	0.11842	0.25851	0.0308	0.26	0.40439	1	0.70637	1	0.86169	1	NA	NA	NA	""	"PCSK6"	"PCSK6_sequences_filtered_longestORFs_mafft_mincov_prank_part1_prank"	"PCSK6_all_part1"	2728	24	"na"	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"PCSK6_bat_select_mafft_prank"	"PCSK6"	1654	8	"0.0986985494453695"	"0.089"	"Y"	0	16	"28, 499, 522, 690, 749, 889, 948, 953, 966, 1010, 1303, 1310, 1324, 1325, 1350, 1398"	"N"	"0.999999715678354"	0	"na"	"N"	"0.105937396179248"	0	"na"	"N"	"1.0"	0	"na"	"Y"	"3.761624567607716e-10"	0	""	""	""	"shared"
"PDE4DIP"	"PDE4DIP"	"PDE4DIP"	"nsp13"	"PDE4DIP"	"list26_COV_list4dataset2nonOrf"	"phosphodiesterase 4D interacting protein"	"CMYA2|MMGL"	"yes"	21	7119	2373	0.42718	0.57408	0.1357	0.3178	0.00025385	0.00407217708333333	0.0011533	0.015857875	0.001219	0.020405	17.329	1.85569	47	"5_-_0.901,7_-_0.905,9_-_0.950,194_Q_0.912,207_T_0.957,214_M_0.938,333_S_0.902,419_R_0.953,421_R_0.977,571_H_0.979,664_E_0.971,690_L_0.914,694_G_0.953,706_T_0.954,736_V_0.952,925_S_0.945,976_V_0.951,1000_M_0.928,1095_A_0.951,1105_Q_0.945,1180_P_0.981,1193_V_0.941,1208_G_0.902,1212_A_0.976,1313_V_0.953,1324_R_0.950,1347_E_0.927,1358_L_0.907,1413_F_0.903,1637_H_0.945,1782_D_0.900,1783_S_0.904,1819_M_0.937,1936_T_0.974,2059_R_0.916,2097_V_0.957,2117_S_0.907,2147_T_0.976,2166_V_0.952,2170_P_0.900,2205_A_0.989,2211_V_0.954,2235_L_0.915,2241_H_0.949,2244_Q_0.946,2258_A_0.957,2366_F_0.961"	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	6063	2021	0.4158	0.41454	0.0978	0.2353	0.0012121	0.0202895	0.0031858	0.0533275217391304	0.0052888	0.092554	18.141	1.90856	14	"8_-_0.942,175_T_0.947,593_G_0.940,602_T_0.942,626_V_0.941,791_S_0.932,935_A_0.940,1011_P_0.983,1122_V_0.942,1405_H_0.926,1665_R_0.915,1853_V_0.938,1892_V_0.944,2015_F_0.952"	"PDE4DIP"	"PDE4DIP_sequences_filtered_longestORFs_mafft_mincov_prank"	"PDE4DIP_all"	6983	22	"na"	"na"	"Y"	"0.0000"	39	"1600, 1988, 1995, 2013, 2083, 2115, 2195, 2273, 2413, 2464, 2468, 2478, 2479, 2484, 2501, 2639, 2734, 2736, 2960, 3042, 3052, 3125, 3127, 3136, 3213, 3276, 3289, 3309, 4254, 4423, 4466, 4488, 4581, 4651, 4656, 4670, 4687, 4986, 5118"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"PDE4DIP_bat_select_check_mafft_prank"	"PDE4DIP"	2894	9	"0.243836905699349"	"0.244"	"N"	0.0597	49	"179, 292, 315, 375, 443, 541, 546, 732, 888, 931, 991, 1201, 1208, 1397, 1437, 1559, 1564, 1583, 1640, 1697, 1783, 1891, 1927, 2005, 2008, 2016, 2018, 2021, 2023, 2027, 2028, 2041, 2135, 2187, 2193, 2194, 2276, 2325, 2364, 2388, 2392, 2450, 2516, 2517, 2526, 2531, 2580, 2855, 2869"	"N"	"0.999997930428758"	0	"na"	"N"	"0.767590091583004"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.20028778934513805"	0	"na"	""	""	"shared"
"PDZD11"	"PDZD11"	"PDZD11"	"nsp12"	"PDZD11"	"list26_COV_list4dataset2nonOrf"	"PDZ domain containing 11"	"AIPP1|PDZK11|PISP"	"no"	23	423	141	1e-04	0.22866	0	0.2764	1	1	1	1	1	1	NA	NA	NA	""	"PDZD11"	"ENSMLUG00000011031.2"	"ENSMLUT00000011024.2"	5	141	75.17730496	0.24885785	0.2315	0.56966	0.56966	-679.731552	-679.731599	0.999953001	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"PDZD11"	0.981912255	1	""	NA	NA	NA	""	""	375	125	1e-04	0.1789	0	0.2204	1	1	1	1	1	1	NA	NA	NA	""	"PDZD11"	"PDZD11_sequences_filtered_longestORFs_mafft_mincov_prank"	"PDZD11_all"	482	24	"0.165348956755"	"0.193"	"Y"	"0.0000"	2	"435, 445"	"N"	"0.7082290406313829"	0	"na"	"N"	"0.3351684111209584"	0	"na"	"N"	"0.7363866194560706"	0	"na"	"N"	"0.4041375454214722"	0	"na"	"PDZD11_sequences_filtered_longestORFs_mafft_prank"	"PDZD11"	194	12	"0.049745910610"	"0.049"	"N"	0.0543	1	"188"	"N"	"0.9999997555486587"	0	"na"	"N"	"0.9999754442623039"	0	"na"	"N"	"1.0"	0	"na"	"N"	"1.0"	0	"na"	""	""	"shared"
"PIGO"	"PIGO"	"PIGO"	"orf9c"	"PIGO"	"list24_COV_list2nonOrf"	"phosphatidylinositol glycan anchor biosynthesis class O"	"HPMRS2"	"no"	24	3276	1092	0.27487	0.43671	0.0783	0.2848	0.24174	0.641787248322148	0.38737	0.867078197674419	0.5056	1	NA	NA	NA	""	"PIGO"	"ENSMLUG00000006159.2"	"ENSMLUT00000006157.2"	15	1097	96.9006381	0.18586015	0.2616	1.19819	1.19982	-10775.27331	-10774.63539	0.52838822	NA	NA	NA	""	"PIGO"	"ENSG00000165282.13"	"ENST00000361778.6"	19	673	98.36552749	0.188942514	0.1108	0.32465	0.32617	-4024.759763	-4024.37837	0.682909453	NA	NA	NA	""	"PIGO"	1	1	""	NA	NA	NA	""	""	2766	922	0.28573	0.30907	0.0574	0.2009	0.63643	1	0.80664	1	0.89465	1	NA	NA	NA	""	"PIGO"	"PIGO_sequences_filtered_longestORFs_mafft_mincov_prank"	"PIGO_all"	1608	24	"0.236723326058"	"0.264"	"N"	"1.0000"	14	"192, 240, 428, 515, 555, 665, 695, 702, 711, 750, 820, 935, 944, 1408"	"N"	"0.999996608534569"	0	"na"	"N"	"0.11394615645405819"	0	"na"	"N"	"0.14646042844749838"	0	"na"	"Y"	"0.0465606274262097"	0	""	"PIGO_sequences_filtered_longestORFs_mafft_prank"	"PIGO"	1196	12	"0.219447199292"	"0.242"	"N"	0.9565	8	"156, 368, 557, 564, 572, 751, 1046, 1078"	"N"	"0.9999965921255213"	0	"na"	"N"	"0.999991909166045"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.8228346580562579"	0	"na"	""	""	"shared"
"PIGS"	"PIGS"	"PIGS"	"orf9c"	"PIGS"	"list26_COV_list4dataset2nonOrf"	"phosphatidylinositol glycan anchor biosynthesis class S"	"-"	"no"	24	1674	558	0.13699	0.43919	0.0527	0.3848	1	1	1	1	1	1	NA	NA	NA	""	"PIGS"	"ENSMLUG00000012363.2"	"ENSMLUT00000012364.2"	14	556	95.14388489	0.113059233	0.3105	1.08827	1.09231	-4851.689763	-4851.470833	0.803377953	NA	NA	NA	""	"PIGS"	"ENSG00000087111.20"	"ENST00000268758.13"	10	42	88.0952381	0.238660577	0.1342	0.33801	0.4123	-201.283434	-200.746994	0.584826533	NA	NA	NA	""	"PIGS"	1	1	""	NA	NA	NA	""	""	1353	451	0.11267	0.30383	0.0307	0.2727	0.061489	0.374941875	1	1	1	1	0.001	1	0	"noneOver_0.9"	"PIGS"	"PIGS_sequences_filtered_longestORFs_mafft_mincov_prank"	"PIGS_all"	676	24	"0.138568117539"	"0.133"	"N"	"1.0000"	1	"637"	"N"	"0.9999997357436208"	0	"na"	"N"	"0.999846628686188"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.9990004998331715"	0	"na"	"PIGS_sequences_filtered_longestORFs_mafft_prank"	"PIGS"	630	12	"0.161492159517"	"0.148"	"N"	0.983	6	"16, 144, 196, 206, 362, 552"	"N"	"0.9999977841650427"	0	"na"	"N"	"0.999601889878112"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.9841273200556575"	0	"na"	""	""	"shared"
"PITRM1"	"PITRM1"	"PITRM1"	"M"	"PITRM1"	"list24_COV_list2nonOrf"	"pitrilysin metallopeptidase 1"	"MP1|PreP"	"no"	24	3117	1039	0.16967	0.92013	0.1271	0.7489	0.24587	0.641787248322148	0.12074	0.411370796460177	1	1	NA	NA	NA	""	"PITRM1"	"ENSMLUG00000001788.2"	"ENSMLUT00000001807.2"	4	1025	93.07317073	0.225980009	0.3712	0.48315	0.89431	-5525.955326	-5511.092897	3.51e-07	-5525.683766	6.59e-08	5	"S104, Q171, S172, L173, G174"	"PITRM1"	"ENSG00000107959.15"	"ENST00000380989.6"	8	1039	95.76515881	0.107752447	0.1232	0.2203	0.22042	-5308.90701	-5308.827802	0.923847744	NA	NA	NA	""	"PITRM1"	1	1	""	NA	NA	NA	""	""	2160	720	0.18605	0.48445	0.0722	0.3881	1	1	1	1	1	1	NA	NA	NA	""	"PITRM1"	"PITRM1_sequences_filtered_longestORFs_mafft_mincov_prank"	"PITRM1_all"	2828	24	"0.129790611586"	"0.139"	"Y"	"0.0000"	24	"117, 123, 825, 837, 914, 938, 964, 1162, 1207, 1215, 1218, 1260, 1305, 1307, 1357, 1372, 1455, 1474, 2213, 2333, 2359, 2377, 2662, 2809"	"N"	"0.9999995957969894"	0	"na"	"N"	"0.4076210903185358"	0	"na"	"Y"	"9.157802140678478e-13"	0	""	"Y"	"0.0011004897180721745"	1	"119"	"PITRM1_sequences_filtered_longestORFs_mafft_prank"	"PITRM1"	1084	10	"0.163972160325"	"0.146"	"N"	1	12	"41, 346, 361, 549, 554, 627, 649, 709, 821, 831, 887, 1012"	"N"	"0.9999999867613952"	0	"na"	"N"	"0.1819655863451437"	0	"na"	"Y"	"1.5117468506889957e-09"	0	""	"N"	"0.16332715561929245"	0	"na"	""	""	"shared"
"PKP2"	"PKP2"	"PKP2"	"nsp1"	"PKP2"	"list24_COV_list2nonOrf"	"plakophilin 2"	"ARVD9"	"no"	24	2655	885	0.15795	0.58899	0.0811	0.5133	0.71917	1	1	1	1	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"PKP2"	0.91996417	1	""	NA	NA	NA	""	""	1896	632	0.17784	0.33125	0.0514	0.2891	0.70539	1	0.85457	1	0.93165	1	NA	NA	NA	""	"PKP2"	"PKP2_sequences_filtered_longestORFs_mafft_mincov_prank"	"PKP2_all"	1127	22	"0.160659314869"	"0.144"	"Y"	"0.0000"	6	"76, 77, 293, 723, 990, 1033"	"N"	"0.9999995148865577"	0	"na"	"N"	"0.9998626427515777"	0	"na"	"N"	"1.0"	0	"na"	"N"	"1.0"	0	"na"	"PKP2_sequences_filtered_longestORFs_mafft_prank"	"PKP2"	894	7	"0.167343436613"	"0.154"	"N"	1	5	"58, 61, 65, 320, 340"	"N"	"0.9999997007180802"	0	"na"	"N"	"0.9999999889741958"	0	"na"	"N"	"1.0"	0	"na"	"N"	"1.0"	0	"na"	"Only very few sequences"	""	"shared"
"PLAT"	"PLAT"	"PLAT"	"orf8"	"PLAT"	"list25_COV_list3dataset2orf"	"plasminogen activator, tissue type"	"T-PA|TPA"	"no"	23	1692	564	0.16564	0.73992	0.1154	0.6966	0.075208	0.301615416666667	0.0249	0.147484615384615	0.28123	1	5.053	1.97012	1	"21_S_0.930"	"PLAT"	"ENSMLUG00000002013.2"	"ENSMLUT00000002012.2"	11	565	98.9380531	0.230998728	0.4105	1.29381	1.29504	-5666.617304	-5666.585307	0.968509488	NA	NA	NA	""	"PLAT"	"ENSG00000104368.17"	"ENST00000521694.1"	19	157	98.72611465	0.161425106	0.3466	0.85212	0.86128	-1242.278572	-1241.57666	0.49563674	NA	NA	NA	""	"PLAT"	0.037451878	0.564196083	""	NA	NA	NA	""	""	1119	373	0.15523	0.33843	0.0533	0.3433	0.61478	1	0.60784	1	0.8822	1	NA	NA	NA	""	"PLAT"	"PLAT_sequences_filtered_longestORFs_mafft_mincov_prank"	"PLAT_all"	682	23	"0.210172895832"	"0.167"	"Y"	"0.0052"	11	"100, 179, 209, 339, 368, 429, 467, 534, 552, 659, 677"	"N"	"0.9999987954413861"	0	"na"	"Y"	"0.04713155923609384"	1	"179"	"N"	"1.0"	0	"na"	"Y"	"0.019177836800726614"	0	""	"PLAT_sequences_filtered_longestORFs_mafft_prank"	"PLAT"	598	12	"0.406866539433"	"0.374"	"Y"	0.0254	23	"6, 32, 120, 150, 184, 195, 204, 219, 220, 234, 250, 253, 277, 317, 342, 396, 418, 428, 497, 510, 538, 559, 594"	"N"	"0.9999978119564111"	0	"na"	"N"	"0.1520578715323859"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.628763554467135"	0	"na"	""	""	"shared"
"PLD3"	"PLD3"	"PLD3"	"orf8"	"PLD3"	"list25_COV_list3dataset2orf"	"phospholipase D family member 3"	"AD19|HU-K4|HUK4|SCA46"	"no"	20	1473	491	0.10911	0.30464	0.0355	0.3251	0.85342	1	0.84194	1	1	1	NA	NA	NA	""	"PLD3"	"ENSMLUG00000007885.2"	"ENSMLUT00000007904.2"	9	491	97.14867617	0.12395641	0.3311	0.89258	0.9003	-3676.996033	-3676.655612	0.711470731	NA	NA	NA	""	"PLD3"	"ENSG00000105223.19"	"ENST00000486134.1"	17	71	95.77464789	0.119009659	0.3026	0.62383	0.65407	-454.915213	-454.783906	0.87694851	NA	NA	NA	""	"PLD3"	0.988548595	1	""	NA	NA	NA	""	""	1107	369	0.06302	0.11948	0.0088	0.1399	0.3198	1	0.2859	1	0.60966	1	NA	NA	NA	""	"PLD3"	"PLD3_sequences_filtered_longestORFs_mafft_mincov_prank"	"PLD3_all"	523	24	"0.106210003370"	"0.086"	"Y"	"0.0002"	2	"392, 483"	"N"	"0.999999916396522"	0	"na"	"N"	"0.24372784306247056"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.22246177275023613"	0	"na"	"PLD3_sequences_filtered_longestORFs_mafft_prank"	"PLD3"	547	12	"0.087847326366"	"0.074"	"N"	1	3	"44, 127, 161"	"N"	"0.9999997026416609"	0	"na"	"N"	"0.0606732522644502"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.08689976073955778"	0	"na"	""	""	"shared"
"PLEKHA5"	"PLEKHA5"	"PLEKHA5"	"nsp12"	"PLEKHA5"	"list24_COV_list2nonOrf"	"pleckstrin homology domain containing A5"	"PEPP-2|PEPP2"	"no"	21	3861	1287	0.16454	0.35837	0.0506	0.3074	0.054008	0.244624470588235	0.07154	0.286905208333333	0.15651	0.76076	4.723	2.05716	3	"365_A_0.900,1205_Y_0.918,1223_P_0.911"	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	3297	1099	0.20673	0.25036	0.0417	0.2016	0.012349	0.121906794871795	0.043068	0.376845	0.043373	0.439436973684211	3.983	3.18246	6	"316_A_0.963,344_N_0.944,763_I_0.950,1034_T_0.956,1035_Y_0.970,1049_P_0.967"	"PLEKHA5"	"PLEKHA5_sequences_filtered_longestORFs_mafft_mincov_prank_part1_prank"	"PLEKHA5_all_part1"	7595	21	"na"	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"PLEKHA5_sequences_filtered_longestORFs_mafft_prank"	"PLEKHA5"	2947	11	"0.147404980383"	"0.132"	"N"	1	9	"433, 461, 2453, 2757, 2761, 2784, 2828, 2837, 2873"	"N"	"0.9999997266277579"	0	"na"	"N"	"0.12842097333294247"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.45384479528361066"	0	"na"	""	""	"shared"
"PLEKHF2"	"PLEKHF2"	"PLEKHF2"	"orf8"	"PLEKHF2"	"list23_COV_list1orf"	"pleckstrin homology and FYVE domain containing 2"	"EAPF|PHAFIN2|ZFYVE18"	"no"	23	750	250	0.05521	0.27314	0.0177	0.3212	1	1	1	1	1	1	NA	NA	NA	""	"PLEKHF2"	"ENSMLUG00000012204.1"	"ENSMLUT00000012203.1"	15	250	98.8	0.028280086	0.2888	0.70329	0.70206	-1812.683687	-1808.892994	0.022579949	-1810.294442	0.094094212	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	651	217	0.06581	0.21058	0.0162	0.2459	1	1	1	1	1	1	NA	NA	NA	""	"PLEKHF2"	"PLEKHF2_sequences_filtered_longestORFs_mafft_mincov_prank"	"PLEKHF2_all"	249	23	"0.061384631227"	"0.056"	"N"	"1.0000"	0	"na"	"N"	"0.9999960259305521"	0	"na"	"N"	"0.1687570848704306"	0	"na"	"N"	"1.0"	0	"na"	"N"	"1.0"	0	"na"	"PLEKHF2_sequences_filtered_longestORFs_mafft_prank"	"PLEKHF2"	249	12	"0.048943152846"	"0.037"	"N"	1	0	"na"	"N"	"0.22983455572188574"	0	"na"	"Y"	"0.006996295069881674"	1	"218"	"N"	"0.20331475164727103"	0	"na"	"Y"	"0.020506774172182902"	1	"218"	""	""	"shared"
"PLOD2"	"PLOD2"	"PLOD2"	"orf8"	"PLOD2"	"list23_COV_list1orf"	"procollagen-lysine,2-oxoglutarate 5-dioxygenase 2"	"BRKS2|LH2|TLH"	"no"	23	2277	759	0.10317	0.29092	0.0301	0.2917	1	1	1	1	0.99093	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"PLOD2"	"ENSG00000152952.11"	"ENST00000480704.1"	16	99	96.96969697	0.363039363	0.213	0.6353	0.6353	-733.040385	-733.040386	0.999999	NA	NA	NA	""	"PLOD2"	0.97110571	1	""	NA	NA	NA	""	""	2043	681	0.12848	0.21004	0.0248	0.1932	0.23467	0.983861290322581	0.459	1	0.52239	1	NA	NA	NA	""	"PLOD2"	"PLOD2_sequences_filtered_longestORFs_mafft_mincov_prank"	"PLOD2_all"	910	24	"0.112917586068"	"0.099"	"N"	"0.9684"	8	"2, 20, 277, 308, 355, 378, 570, 797"	"N"	"0.2972724503773207"	0	"na"	"Y"	"0.00038959564441634636"	1	"20"	"Y"	"0.021004890235729264"	0	""	"Y"	"0.00012390443189924853"	1	"20"	"PLOD2_sequences_filtered_longestORFs_mafft_prank"	"PLOD2"	836	10	"0.095937946781"	"0.082"	"N"	0.0718	5	"64, 79, 80, 84, 673"	"N"	"0.9999986137900636"	0	"na"	"Y"	"0.0006372406189584631"	6	"54, 64, 69, 80, 308, 365"	"N"	"1.0"	0	"na"	"N"	"0.15366198369305042"	0	"na"	""	""	"shared"
"PMPCA"	"PMPCA"	"PMPCA"	"M"	"PMPCA"	"list24_COV_list2nonOrf"	"peptidase, mitochondrial processing alpha subunit"	"Alpha-MPP|CLA1|CPD3|INPP5E|P-55|SCAR2"	"no"	24	1578	526	0.09776	0.72842	0.069	0.7056	0.61863	1	0.28881	0.7281	0.84442	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"PMPCA"	"ENSG00000165688.11"	"ENST00000444897.2"	8	272	93.01470588	0.24738248	0.1426	0.41602	0.44285	-1552.358247	-1551.276085	0.338862113	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	1047	349	0.06969	0.4089	0.0306	0.4398	1	1	1	1	1	1	NA	NA	NA	""	"PMPCA"	"PMPCA_sequences_filtered_longestORFs_mafft_mincov_prank"	"PMPCA_all"	2133	22	"0.090932719246"	"0.095"	"Y"	"0.0409"	9	"262, 311, 349, 962, 1067, 1330, 1890, 1908, 1922"	"N"	"0.9999997696359325"	0	"na"	"Y"	"5.917791328477869e-05"	3	"297, 311, 1190"	"N"	"1.0"	0	"na"	"N"	"0.053718383445887474"	0	"na"	"PMPCA_sequences_filtered_longestORFs_mafft_prank"	"PMPCA"	885	10	"0.072861463768"	"0.085"	"N"	0.8983	6	"153, 154, 503, 521, 662, 776"	"N"	"0.9999991202916366"	0	"na"	"N"	"0.4562990412926383"	0	"na"	"N"	"1.0"	0	"na"	"N"	"1.0"	0	"na"	""	""	"shared"
"PMPCB"	"PMPCB"	"PMPCB"	"M"	"PMPCB"	"list24_COV_list2nonOrf"	"peptidase, mitochondrial processing beta subunit"	"Beta-MPP|MPP11|MPPB|MPPP52|P-52"	"no"	23	1473	491	0.17734	0.40849	0.0615	0.3469	0.73014	1	0.93474	1	0.99203	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"PMPCB"	"ENSG00000105819.13"	"ENST00000453466.1"	18	120	85	0.213684658	0.3629	0.76883	0.80597	-813.913803	-808.924074	0.006807509	-813.840738	0.00171378	1	"A110"	""	NA	NA	""	NA	NA	NA	""	""	1266	422	0.19537	0.29376	0.0481	0.2462	0.4863	1	0.77581	1	0.8086	1	NA	NA	NA	""	"PMPCB"	"PMPCB_sequences_filtered_longestORFs_mafft_mincov_prank"	"PMPCB_all"	830	24	"0.204359423038"	"0.177"	"Y"	"0.0004"	7	"99, 103, 125, 133, 148, 670, 678"	"N"	"0.18727413961788525"	0	"na"	"Y"	"0.00017242828028838283"	5	"113, 116, 148, 670, 678"	"N"	"0.07699613909573662"	0	"na"	"Y"	"0.011527728176241822"	1	"670"	"PMPCB_sequences_filtered_longestORFs_mafft_prank"	"PMPCB"	496	12	"0.154664421420"	"0.126"	"Y"	0	19	"24, 25, 29, 42, 43, 168, 211, 264, 289, 300, 343, 346, 376, 382, 439, 448, 457, 461, 496"	"N"	"0.9999994096448896"	0	"na"	"Y"	"0.0001485699424057094"	28	"3, 4, 9, 10, 12, 15, 17, 18, 21, 23, 24, 26, 29, 37, 38, 51, 264, 265, 269, 273, 300, 346, 376, 382, 388, 457, 486, 496"	"N"	"1.0"	0	"na"	"N"	"0.6859160738960525"	0	"na"	"Looks like there is indeed some PS. But some of the MEME and BioppM7M8 signal in the middle/Cter portion is weird"	""	"shared"
"POFUT1"	"POFUT1"	"POFUT1"	"orf8"	"POFUT1"	"list25_COV_list3dataset2orf"	"protein O-fucosyltransferase 1"	"DDD2|FUT12|O-FUT|O-Fuc-T|O-FucT-1|OFUCT1"	"no"	24	1167	389	0.10747	0.48828	0.0508	0.4726	1	1	1	1	1	1	NA	NA	NA	""	"POFUT1"	"ENSMLUG00000008418.2"	"ENSMLUT00000008424.2"	12	392	97.70408163	0.184066525	0.359	1.28852	1.29612	-3796.585477	-3795.631984	0.385392494	NA	NA	NA	""	"POFUT1"	"ENSG00000101346.13"	"ENST00000375730.3"	17	195	88.71794872	0.106511159	0.2531	0.37121	0.36961	-1023.094752	-1022.994131	0.904275688	NA	NA	NA	""	"POFUT1"	1	1	""	NA	NA	NA	""	""	894	298	0.13903	0.24831	0.0312	0.2248	1	1	1	1	1	1	NA	NA	NA	""	"POFUT1"	"POFUT1_sequences_filtered_longestORFs_mafft_mincov_prank"	"POFUT1_all"	777	24	"0.134710840412"	"0.117"	"Y"	"0.0054"	4	"11, 19, 21, 529"	"N"	"0.9999998223093074"	0	"na"	"N"	"0.23449724785509962"	0	"na"	"N"	"1.0"	0	"na"	"N"	"1.0"	0	"na"	"POFUT1_sequences_filtered_longestORFs_mafft_prank"	"POFUT1"	670	12	"0.150592576223"	"0.136"	"N"	0.2747	1	"580"	"N"	"0.999999332628472"	0	"na"	"Y"	"0.044397322861119"	2	"462, 465"	"N"	"0.911193500295451"	0	"na"	"Y"	"0.03043993138796614"	0	""	""	""	"shared"
"POGLUT2"	"POGLUT2"	"KDELC1"	"orf8"	"KDELC1"	"list23_COV_list1orf"	"KDEL motif containing 1"	"EP58|ERp58|KDEL1"	"no"	24	1509	503	0.16399	0.49371	0.0666	0.4064	0.27646	0.687759032258065	0.55105	1	0.73389	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"KDELC1"	1	1	""	NA	NA	NA	""	""	1233	411	0.22186	0.29863	0.0488	0.2201	0.96996	1	0.99702	1	1	1	NA	NA	NA	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
"POGLUT3"	"POGLUT3"	"KDELC2"	"orf8"	"KDELC2"	"list23_COV_list1orf"	"KDEL motif containing 2"	"-"	"no"	24	1524	508	0.19302	0.44994	0.0662	0.3428	0.057575	0.249060393258427	0.046571	0.216022108433735	0.16748	0.796046913580247	0.531	4.88598	0	"noneOver_0.9"	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"KDELC2"	1	1	""	NA	NA	NA	""	""	1173	391	0.17366	0.28161	0.0382	0.2198	1	1	1	1	0.99981	1	NA	NA	NA	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA
"POLA1"	"POLA1"	"POLA1"	"nsp1"	"POLA1"	"list24_COV_list2nonOrf"	"DNA polymerase alpha 1, catalytic subunit"	"NSX|POLA|p180"	"yes"	23	4407	1469	0.34634	0.34119	0.0746	0.2155	1.5891e-10	2.039345e-08	1.1774e-09	1.51099666666667e-07	1.2972e-09	1.66474e-07	0.426	17.73252	9	"15_G_0.989,16_A_0.997,17_S_1.000,205_S_0.957,238_P_0.937,566_V_0.912,735_Q_0.954,1075_V_0.989,1099_N_0.925"	"POLA1"	"ENSMLUG00000004537.2"	"ENSMLUT00000004548.2"	10	1350	93.85185185	0.188601927	0.2663	0.7851	0.80503	-9819.54088	-9806.381977	1.93e-06	-9818.83609	6.01e-07	3	"P289, H243, V1073"	"POLA1"	"ENSG00000101868.10"	"ENST00000611764.1"	15	1462	95.69083447	0.269632203	0.0987	0.25387	0.25688	-7874.115011	-7872.112305	0.134969561	NA	NA	NA	""	"POLA1"	0.058773459	0.717665523	""	NA	NA	NA	""	""	3831	1277	0.38372	0.22477	0.0529	0.1378	2.2632e-08	2.90444e-06	1.4029e-07	1.35029125e-05	1.1093e-07	1.42360166666667e-05	0.078	54.80272	4	"6_S_1.000,85_G_0.923,624_T_0.904,956_N_0.936"	"POLA1"	"POLA1_sequences_filtered_longestORFs_mafft_mincov_prank"	"POLA1_all"	1919	22	"0.301302665223"	"0.259"	"Y"	"0.0000"	11	"122, 123, 270, 547, 836, 847, 955, 1296, 1390, 1633, 1678"	"Y"	"3.723647917907225e-06"	3	"122, 345, 1678"	"Y"	"2.007229115287742e-08"	4	"122, 345, 351, 1678"	"Y"	"0.0014215605953936511"	3	"122, 345, 351"	"na"	"na"	0	"na"	"POLA1_sequences_filtered_longestORFs_mafft_prank"	"POLA1"	1573	12	"0.275408633142"	"0.261"	"N"	0.0588	20	"174, 208, 224, 247, 294, 321, 360, 362, 540, 620, 743, 891, 1164, 1330, 1374, 1494, 1532, 1535, 1538, 1573"	"Y"	"0.00029491151462736847"	2	"294, 341"	"Y"	"4.708850802002232e-09"	4	"294, 341, 1133, 1330"	"Y"	"2.5055557293228085e-06"	0	""	"Y"	"7.047554970330143e-08"	5	"294, 341, 360, 1133, 1573"	"yes PS"	""	"shared"
"POLA2"	"POLA2"	"POLA2"	"nsp1"	"POLA2"	"list26_COV_list4dataset2nonOrf"	"DNA polymerase alpha 2, accessory subunit"	"-"	"no"	24	1797	599	0.15279	0.51575	0.0645	0.4225	0.16456	0.519308196721311	0.15917	0.498215040650407	0.3952	1	NA	NA	NA	""	"POLA2"	"ENSMLUG00000003879.2"	"ENSMLUT00000003883.2"	9	600	98.33333333	0.17624986	0.3733	0.96837	0.97292	-4965.384841	-4964.261652	0.325240946	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"POLA2"	1	1	""	NA	NA	NA	""	""	1413	471	0.20687	0.29671	0.0467	0.2257	1	1	1	1	1	1	NA	NA	NA	""	"POLA2"	"POLA2_sequences_filtered_longestORFs_mafft_mincov_prank"	"POLA2_all"	998	24	"0.184125429083"	"0.175"	"N"	"1.0000"	5	"356, 436, 496, 498, 513"	"N"	"0.9999988280067147"	0	"na"	"N"	"0.1198582560555339"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.1193135949950122"	0	"na"	"POLA2_sequences_filtered_longestORFs_mafft_prank"	"POLA2"	858	12	"0.203525948892"	"0.214"	"Y"	8e-04	6	"108, 114, 131, 150, 162, 164"	"N"	"0.9999999185247395"	0	"na"	"N"	"0.9806751585650236"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.15350839851485368"	0	"na"	""	""	"shared"
"POR"	"POR"	"POR"	"nsp2"	"POR"	"list26_COV_list4dataset2nonOrf"	"cytochrome p450 oxidoreductase"	"CPR|CYPOR|P450R"	"no"	23	2043	681	0.04527	0.69983	0.0518	1.1451	1	1	0.9344	1	1	1	NA	NA	NA	""	"POR"	"ENSMLUG00000017792.2"	"ENSMLUT00000017796.2"	9	685	99.12408759	0.146073289	0.3303	0.75413	0.75409	-4874.958514	-4874.954571	0.996064763	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"POR"	0.04458031	0.618876279	""	NA	NA	NA	""	""	1284	428	0.05143	0.28952	0.0263	0.5117	0.62656	1	0.52077	1	0.89448	1	NA	NA	NA	""	"POR"	"POR_sequences_filtered_longestORFs_mafft_mincov_prank"	"POR_all"	1040	24	"0.067794049403"	"0.052"	"Y"	"0.0000"	6	"214, 215, 289, 798, 830, 849"	"N"	"0.9999484617067621"	0	"na"	"Y"	"4.880931697279608e-06"	3	"215, 567, 572"	"N"	"0.3620402085436244"	0	"na"	"Y"	"9.194506709446797e-13"	1	"215"	"POR_sequences_filtered_longestORFs_mafft_prank"	"POR"	921	11	"0.086809958980"	"0.083"	"N"	0.7166	4	"217, 367, 377, 774"	"N"	"0.9999998038529349"	0	"na"	"Y"	"0.013382069942123242"	2	"249, 305"	"N"	"1.0"	0	"na"	"Y"	"0.017474720242549"	1	"249"	""	""	"shared"
"PPIL3"	"PPIL3"	"PPIL3"	"nsp12"	"PPIL3"	"list24_COV_list2nonOrf"	"peptidylprolyl isomerase like 3"	"CYPJ"	"no"	22	486	162	0.08706	0.30564	0.0282	0.3245	1	1	1	1	1	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"PPIL3"	1	1	""	NA	NA	NA	""	""	444	148	0.10982	0.23897	0.0273	0.2485	1	1	1	1	1	1	NA	NA	NA	""	"PPIL3"	"PPIL3_sequences_filtered_longestORFs_mafft_mincov_prank"	"PPIL3_all"	624	23	"0.167852646185"	"0.178"	"Y"	"0.0037"	2	"54, 316"	"N"	"0.9999980185276931"	0	"na"	"N"	"0.999954805226432"	0	"na"	"N"	"1.0"	0	"na"	"N"	"1.0"	0	"na"	"PPIL3_sequences_filtered_longestORFs_mafft_prank"	"PPIL3"	235	12	"0.108093140816"	"0.110"	"N"	1	0	"na"	"N"	"0.9999978561116012"	0	"na"	"N"	"0.9579717769964547"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.8940442575002858"	0	"na"	""	""	"shared"
"PPT1"	"PPT1"	"PPT1"	"orf10"	"PPT1"	"list25_COV_list3dataset2orf"	"palmitoyl-protein thioesterase 1"	"CLN1|INCL|PPT"	"no"	24	921	307	0.13334	0.44277	0.0502	0.3763	0.26734	0.68064477124183	0.5405	1	0.77288	1	NA	NA	NA	""	"PPT1"	"ENSMLUG00000011644.2"	"ENSMLUT00000011641.2"	9	267	96.25468165	0.257815896	0.2072	0.66153	0.66126	-1903.829352	-1903.71181	0.889103169	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	750	250	0.16672	0.30025	0.0383	0.2296	0.40213	1	0.64047	1	0.70249	1	NA	NA	NA	""	"PPT1"	"PPT1_sequences_filtered_longestORFs_mafft_mincov_prank"	"PPT1_all"	411	24	"0.170108493272"	"0.181"	"N"	"1.0000"	0	"na"	"N"	"0.9999984412396187"	0	"na"	"N"	"0.32403175500629133"	0	"na"	"N"	"0.9831436846350813"	0	"na"	"N"	"0.2621076452154077"	0	"na"	"PPT1_sequences_filtered_longestORFs_mafft_prank"	"PPT1"	382	12	"0.303232389071"	"0.308"	"Y"	0.0013	4	"69, 90, 129, 170"	"N"	"0.9999996432607713"	0	"na"	"N"	"0.4664126912175116"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.9851119396031881"	0	"na"	""	""	"shared"
"PRIM1"	"PRIM1"	"PRIM1"	"nsp1"	"PRIM1"	"list24_COV_list2nonOrf"	"DNA primase subunit 1"	"p49"	"no"	23	1263	421	0.25068	0.30154	0.0544	0.2169	0.025364	0.147956666666667	0.078595	0.305647222222222	0.089922	0.5392625	0.34	10.08588	1	"258_G_0.978"	"PRIM1"	"ENSMLUG00000016776.2"	"ENSMLUT00000016785.2"	3	423	98.58156028	0.206815922	0.205	0.2646	0.27313	-2146.060778	-2144.796155	0.28234572	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"PRIM1"	1	1	""	NA	NA	NA	""	""	1086	362	0.23839	0.20889	0.0369	0.1547	0.83862	1	0.87813	1	0.97947	1	NA	NA	NA	""	"PRIM1"	"PRIM1_sequences_filtered_longestORFs_mafft_mincov_prank"	"PRIM1_all"	637	23	"0.365201136035"	"0.367"	"Y"	"0.0381"	11	"42, 243, 400, 404, 419, 420, 430, 449, 471, 522, 523"	"N"	"0.3772508500342065"	0	"na"	"N"	"0.0922978762770567"	0	"na"	"N"	"0.7772447380686296"	0	"na"	"Y"	"0.019742136871489187"	0	""	"PRIM1_sequences_filtered_longestORFs_mafft_prank"	"PRIM1"	467	12	"0.229678204850"	"0.221"	"N"	0.1124	2	"302, 327"	"Y"	"0.0032052637220846263"	1	"323"	"Y"	"3.0435982275610693e-08"	9	"3, 299, 302, 323, 326, 327, 335, 337, 338"	"N"	"0.9427067691573432"	0	"na"	"Y"	"0.00028844676858805923"	4	"3, 302, 323, 337"	"yes PS"	""	"shared"
"PRIM2"	"PRIM2"	"PRIM2"	"nsp1"	"PRIM2"	"list24_COV_list2nonOrf"	"DNA primase subunit 2"	"PRIM2A|p58"	"yes"	24	1530	510	0.32302	0.46099	0.0986	0.3053	7.1094e-08	5.474238e-06	3.3399e-07	2.1431025e-05	4.9329e-07	3.75824166666667e-05	6	4.30163	12	"5_G_0.933,6_K_0.908,7_L_0.944,8_R_0.999,9_R_0.923,10_M_0.979,11_Q_0.996,164_Q_0.956,173_L_0.975,176_V_0.998,179_-_0.965,180_S_0.986"	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	1359	453	0.33447	0.35235	0.0764	0.2284	0.00010698	0.003432275	0.00025044	0.00803495	0.0005311	0.0185885	5.344	4.18248	8	"5_G_0.954,6_K_0.938,7_L_0.959,8_R_0.948,142_Q_0.964,145_I_0.926,151_N_0.919,153_V_0.998"	"PRIM2"	"PRIM2_sequences_filtered_longestORFs_mafft_mincov_prank"	"PRIM2_all"	634	19	"0.330737120235"	"0.295"	"Y"	"0.0000"	14	"21, 23, 24, 27, 89, 186, 190, 199, 201, 202, 348, 349, 357, 381"	"Y"	"0.00010247199023237653"	2	"24, 348"	"Y"	"2.0254788105544518e-08"	6	"24, 26, 92, 199, 200, 348"	"Y"	"3.4608373136746415e-06"	5	"24, 26, 92, 199, 348"	"Y"	"1.105735315956251e-06"	5	"24, 26, 92, 199, 348"	"PRIM2_sequences_filtered_longestORFs_mafft_prank"	"PRIM2"	620	11	"0.270987796562"	"0.247"	"N"	0.0887	13	"83, 88, 97, 111, 145, 146, 148, 171, 228, 259, 294, 379, 526"	"N"	"0.5062462656940934"	0	"na"	"N"	"0.07151864304986696"	0	"na"	"N"	"0.2961171872901758"	0	"na"	"N"	"0.052812889433677984"	0	"na"	""	""	"shared"
"PRKACA"	"PRKACA"	"PRKACA"	"nsp13"	"PRKACA"	"list26_COV_list4dataset2nonOrf"	"protein kinase cAMP-activated catalytic subunit alpha"	"PKACA|PPNAD4"	"no"	20	1056	352	0.01831	0.28052	0.0076	0.4162	1	1	1	1	1	1	NA	NA	NA	""	"PRKACA"	"ENSMLUG00000008255.2"	"ENSMLUT00000008252.2"	9	243	96.70781893	0.066924939	0.3759	0.73304	0.75682	-1703.989269	-1703.456416	0.586928073	NA	NA	NA	""	"PRKACA"	"ENSG00000072062.13"	"ENST00000308677.8"	15	352	93.18181818	0.588676251	0.5711	1.35481	1.37944	-2935.873854	-2935.292462	0.55911953	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	786	262	0.04962	0.13391	0.0098	0.1969	0.74157	1	0.69838	1	1	1	NA	NA	NA	""	"PRKACA"	"PRKACA_sequences_filtered_longestORFs_D365gp2_prank"	"PRKACA_365-2"	501	18	"0.039710780541"	"0.052"	"N"	"0.2569"	1	"499"	"N"	"0.9999991376127207"	0	"na"	"N"	"0.13572725067863908"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.18050442252244114"	0	"na"	"PRKACA_sequences_filtered_longestORFs_mafft_prank_part2_prank"	"PRKACA_part2"	435	12	"0.032086701525"	"0.027"	"Y"	0	1	"64"	"N"	"0.9999995230988361"	0	"na"	"N"	"0.24706495671427373"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.9990004998336257"	0	"na"	""	""	"shared"
"PRKAR2A"	"PRKAR2A"	"PRKAR2A"	"nsp13"	"PRKAR2A"	"list26_COV_list4dataset2nonOrf"	"protein kinase cAMP-dependent type II regulatory subunit alpha"	"PKR2|PRKAR2"	"no"	24	1215	405	0.292	0.40393	0.0797	0.273	0.31871	0.757428086419753	0.49167	1	0.61064	1	NA	NA	NA	""	"PRKAR2A"	"ENSMLUG00000016288.2"	"ENSMLUT00000016294.2"	11	306	86.92810458	0.096603538	0.5384	0.97041	0.97603	-2217.430293	-2214.792451	0.071515433	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	933	311	0.38004	0.22242	0.0506	0.1331	1	1	1	1	1	1	NA	NA	NA	""	"PRKAR2A"	"PRKAR2A_sequences_filtered_longestORFs_mafft_mincov_prank_part1_prank"	"PRKAR2A_all_part1"	984	23	"0.299073519639"	"0.282"	"N"	"1.0000"	4	"201, 598, 833, 845"	"Y"	"0.024791201325934854"	2	"201, 212"	"Y"	"0.002101126869598929"	2	"201, 212"	"Y"	"0.04522976007777733"	0	""	"Y"	"0.003312672544899771"	1	"201"	"PRKAR2A_sequences_filtered_longestORFs_duplication_remainingsequences_prank"	"PRKAR2A_rem"	428	12	"0.191067386740"	"0.186"	"N"	0.8393	5	"68, 259, 305, 424, 427"	"N"	"0.718417650460873"	0	"na"	"na"	"na"	0	"na"	"N"	"0.39971639333816755"	0	"na"	"Y"	"0.01412230241016088"	0	""	"yes duplication ok"	""	"shared"
"PRKAR2B"	"PRKAR2B"	"PRKAR2B"	"nsp13"	"PRKAR2B"	"list26_COV_list4dataset2nonOrf"	"protein kinase cAMP-dependent type II regulatory subunit beta"	"PRKAR2|RII-BETA"	"no"	23	1266	422	0.12042	0.30311	0.0326	0.2704	0.053419	0.244624470588235	0.15359	0.484689754098361	0.19343	0.886554166666667	0.44	8.4592	1	"61_A_0.983"	"PRKAR2B"	"ENSMLUG00000012418.2"	"ENSMLUT00000012421.2"	11	305	99.01639344	0.022501629	0.2602	0.46327	0.46328	-1820.904966	-1820.90569	0.999276262	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	972	324	0.08201	0.16457	0.014	0.1708	0.687	1	0.79637	1	0.92204	1	NA	NA	NA	""	"PRKAR2B"	"PRKAR2B_sequences_filtered_longestORFs_mafft_mincov_prank_part1_prank"	"PRKAR2B_all_part1"	653	24	"0.158472375125"	"0.155"	"Y"	"0.0156"	3	"248, 472, 473"	"N"	"0.4699461333020021"	0	"na"	"Y"	"0.02022628095991523"	2	"248, 292"	"N"	"0.5163347414967244"	0	"na"	"N"	"0.25132710025408966"	0	"na"	"PRKAR2B_sequences_filtered_longestORFs_duplication_remainingsequences_prank"	"PRKAR2B_rem"	445	12	"0.051934715957"	"0.057"	"Y"	0.0023	1	"432"	"N"	"0.9999980988359194"	0	"na"	"N"	"0.11799096386319853"	0	"na"	"N"	"1.0"	0	"na"	"N"	"1.0"	0	"na"	""	""	"shared"
"PRRC2B"	"PRRC2B"	"PRRC2B"	"nsp12"	"PRRC2B"	"list26_COV_list4dataset2nonOrf"	"proline rich coiled-coil 2B"	"BAT2L|BAT2L1|KIAA0515|LQFBS-1"	"yes"	22	6741	2247	0.16522	0.44272	0.0595	0.3599	0.0003574	0.00529226923076923	3.9029e-05	0.00100174433333333	0.0021999	0.0313689444444444	0.607	4.55415	4	"573_C_0.978,1184_T_0.941,1236_T_0.961,1281_A_0.921"	"PRRC2B"	"ENSMLUG00000001237.2"	"ENSMLUT00000001244.2"	4	2229	96.54553611	0.202135193	0.3733	0.84743	0.86752	-14962.60934	-14958.13038	0.011345206	-14958.87192	0.223291688	NA	""	"PRRC2B"	"ENSG00000130723.18"	"ENST00000638390.1"	18	326	100	0.103200802	0.0727	0.12189	0.12189	-1593.364246	-1593.364279	0.999967001	NA	NA	NA	""	"PRRC2B"	0.129440486	1	""	NA	NA	NA	""	""	5022	1674	0.22811	0.22154	0.0382	0.1673	0.39749	1	0.58988	1	0.69977	1	NA	NA	NA	""	"PRRC2B"	"PRRC2B_sequences_filtered_longestORFs_mafft_mincov_prank_part1_prank"	"PRRC2B_all_part1"	3044	23	"na"	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"PRRC2B_sequences_filtered_longestORFs_mafft_prank"	"PRRC2B"	2626	9	"0.173459583148"	"0.158"	"Y"	0.0145	0	"na"	"N"	"0.9999989880530511"	0	"na"	"N"	"0.0791555736912109"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.20638746062598415"	0	"na"	""	""	"shared"
"PSMD8"	"PSMD8"	"PSMD8"	"M"	"PSMD8"	"list26_COV_list4dataset2nonOrf"	"proteasome 26S subunit, non-ATPase 8"	"HEL-S-91n|HIP6|HYPF|Nin1p|Rpn12|S14|p31"	"no"	24	1053	351	0.09383	0.50047	0.0581	0.6188	1	1	0.77716	1	1	1	NA	NA	NA	""	"PSMD8"	"ENSMLUG00000009902.2"	"ENSMLUT00000009898.2"	7	341	88.85630499	0.126455804	0.3519	0.68178	0.77693	-2063.089941	-2054.398826	0.000168073	-2062.954793	3.52e-05	5	"E32, A34, L28, S109, V14"	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"PSMD8"	0.983727412	1	""	NA	NA	NA	""	""	732	244	0.0832	0.29688	0.0318	0.3823	1	1	1	1	1	1	NA	NA	NA	""	"PSMD8"	"PSMD8_sequences_filtered_longestORFs_mafft_mincov_prank"	"PSMD8_all"	501	24	"0.141291057576"	"0.092"	"N"	"0.0615"	2	"88, 411"	"N"	"0.9943178708245272"	0	"na"	"N"	"0.13875385381717611"	0	"na"	"N"	"0.9212719586960403"	0	"na"	"Y"	"0.005102625845940538"	0	""	"PSMD8_sequences_filtered_longestORFs_mafft_prank"	"PSMD8"	366	12	"0.111408772558"	"0.081"	"Y"	0	5	"25, 43, 58, 64, 130"	"N"	"0.9616347107394698"	0	"na"	"Y"	"5.771337692709617e-05"	39	"3, 6, 8, 9, 10, 23, 24, 25, 26, 28, 29, 35, 36, 37, 38, 43, 50, 55, 56, 57, 58, 60, 65, 66, 68, 77, 80, 82, 83, 84, 88, 92, 93, 96, 98, 117, 130, 131, 190"	"N"	"0.2687429318443122"	0	"na"	"N"	"0.8807336725971986"	0	"na"	""	""	"shared"
"PTBP2"	"PTBP2"	"PTBP2"	"orf9b"	"PTBP2"	"list25_COV_list3dataset2orf"	"polypyrimidine tract binding protein 2"	"PTBLP|brPTB|nPTB"	"no"	24	1614	538	1e-04	0.19238	0	0.2472	1	1	1	1	0.99787	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"PTBP2"	1	1	""	NA	NA	NA	""	""	1443	481	1e-04	0.12864	0	0.1638	0.99403	1	1	1	0.99863	1	NA	NA	NA	""	"PTBP2"	"PTBP2_sequences_filtered_longestORFs_mafft_mincov_prank_part1_prank"	"PTBP2_all_part1"	871	22	"0.007644042056"	"0.015"	"Y"	"0.0100"	0	"na"	"N"	"0.9999999998981366"	0	"na"	"N"	"0.9999957093679047"	0	"na"	"Y"	"0.0023414146055088974"	0	""	"Y"	"0.000234512890837538"	0	""	"PTBP2_sequences_filtered_longestORFs_mafft_prank_part1_prank"	"PTBP2_part1"	702	12	"0.006126637877"	"0.007"	"N"	1	0	"na"	"N"	"0.9999999988476702"	0	"na"	"N"	"0.07994692970857444"	0	"na"	"N"	"0.7482635675785925"	0	"na"	"N"	"0.7475156780179659"	0	"na"	"Yes TB"	""	"shared"
"PTGES2"	"PTGES2"	"PTGES2"	"nsp7"	"PTGES2"	"list26_COV_list4dataset2nonOrf"	"prostaglandin E synthase 2"	"C9orf15|GBF-1|GBF1|PGES2|mPGES-2"	"no"	24	1134	378	0.07702	0.72054	0.0775	1.0067	1	1	0.48597	1	1	1	NA	NA	NA	""	"PTGES2"	"ENSMLUG00000013576.2"	"ENSMLUT00000013581.2"	8	375	80	0.203412788	0.4166	1.20399	1.24465	-2592.589381	-2591.41349	0.308543945	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"PTGES2"	1	1	""	NA	NA	NA	""	""	696	232	0.04953	0.29556	0.0245	0.4938	1	1	0.059658	0.49931152173913	0.99987	1	0.043	422.17375	0	"noneOver_0.9"	"PTGES2"	"PTGES2_sequences_filtered_longestORFs_mafft_mincov_prank"	"PTGES2_all"	734	21	"0.099052284958"	"0.091"	"Y"	"0.0000"	10	"223, 226, 243, 299, 351, 370, 486, 488, 610, 719"	"N"	"0.9999998492021518"	0	"na"	"N"	"0.19146004921817086"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.478069098216242"	0	"na"	"PTGES2_sequences_filtered_longestORFs_mafft_prank"	"PTGES2"	690	12	"0.055491753823"	"0.091"	"Y"	0	1	"70"	"N"	"0.9999999546357695"	0	"na"	"Y"	"0.004400481161938919"	3	"114, 202, 411"	"N"	"1.0"	0	"na"	"N"	"1.0"	0	"na"	"Recombination: Triggered by Nter variation before the M start. Between and within species. The Frag1 aln has no sense to be made because there is no common history within that aln in bats (and it is expected to crash in the PS because no common site with PRANK here).
- PS: Yes frag2 should be under PS. Aln is afftected by lots and lots of structural variants within species. I made a handcurated one with only one ID per species and we can keep that in mind if needed for later analyses.
"	""	"shared"
"PUSL1"	"PUSL1"	"PUSL1"	"orf8"	"PUSL1"	"list23_COV_list1orf"	"pseudouridylate synthase like 1"	"-"	"yes"	22	912	304	0.14275	0.85132	0.1262	0.8841	0.00048927	0.0067274625	0.00027699	0.00507815	0.0037234	0.0473736290322581	0.914	6.8565	2	"141_S_0.923,303_E_0.987"	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"PUSL1"	"ENSG00000169972.11"	"ENST00000467712.1"	18	125	94.4	0.114100887	0.3613	0.93862	0.94765	-1034.121171	-1033.620377	0.606049266	NA	NA	NA	""	"PUSL1"	0.365021161	1	""	NA	NA	NA	""	""	453	151	0.20245	0.52978	0.0976	0.482	0.63273	1	0.8921	1	1	1	NA	NA	NA	""	"PUSL1"	"PUSL1_sequences_filtered_longestORFs_mafft_mincov_prank"	"PUSL1_all"	2174	20	"0.136296404622"	"0.171"	"N"	"0.9380"	4	"161, 229, 501, 1587"	"N"	"0.9999998648163546"	0	"na"	"N"	"0.8749368182311382"	0	"na"	"N"	"1.0"	0	"na"	"Y"	"0.00038279919550335127"	1	"1587"	"PUSL1_sequences_filtered_longestORFs_mafft_prank"	"PUSL1"	733	11	"0.159830842553"	"0.171"	"Y"	0.0015	7	"127, 462, 495, 496, 515, 585, 588"	"N"	"0.9999986238163193"	0	"na"	"N"	"0.9694927663741583"	0	"na"	"Y"	"0.00012316323113359992"	0	""	"Y"	"6.000996057124083e-05"	0	""	"Most of the signal comes from the Cter that has lots and lots of variability and does not allow for a good aln."	""	"shared"
"PVR"	"PVR"	"PVR"	"orf8"	"PVR"	"list23_COV_list1orf"	"poliovirus receptor"	"CD155|HVED|NECL5|Necl-5|PVS|TAGE4"	"yes"	26	1263	421	0.55674	1.7972	0.5039	0.905	3.286e-14	6.32555e-12	2.733e-16	5.261025e-14	6.735e-14	1.2964875e-11	10.922	3.37707	20	"24_-_0.925,81_R_0.951,219_I_0.933,343_W_0.999,345_N_1.000,356_V_0.975,364_F_0.963,370_W_0.996,373_C_0.996,375_R_0.959,381_-_0.956,388_R_0.999,389_T_0.984,390_A_0.951,391_A_0.952,393_T_0.942,394_L_0.997,403_P_0.978,410_S_0.969,420_R_0.993"	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	753	251	0.6007	1.13723	0.3275	0.5451	1.6829e-07	1.295833e-05	8.8661e-07	6.826897e-05	1.1781e-06	9.07137e-05	11.142	4.14108	16	"113_I_0.971,201_P_0.972,209_V_0.994,211_V_0.912,213_T_0.948,215_L_0.909,229_-_0.976,230_A_0.984,231_V_0.919,236_P_0.997,238_A_0.924,239_-_0.926,243_S_0.954,247_E_0.926,249_T_0.955,250_R_0.999"	"PVR"	"PVR_sequences_filtered_longestORFs_mafft_mincov_prank"	"PVR_all"	1480	23	"0.585837982910"	"0.442"	"Y"	"0.0000"	41	"207, 235, 237, 332, 357, 363, 367, 388, 397, 409, 412, 451, 452, 458, 469, 470, 512, 516, 518, 526, 535, 553, 558, 566, 569, 586, 593, 596, 598, 627, 628, 632, 634, 644, 647, 658, 673, 699, 707, 711, 1158"	"Y"	"2.3760715522747607e-07"	2	"1129, 1131"	"Y"	"8.657276700697942e-09"	4	"330, 1129, 1131, 1166"	"Y"	"3.5532082577431795e-10"	3	"1129, 1131, 1166"	"Y"	"2.135661414900621e-15"	4	"1129, 1131, 1166, 1285"	"PVR_sequences_filtered_longestORFs_mafft_prank"	"PVR"	1556	9	"0.386585296754"	"0.326"	"Y"	0	33	"96, 105, 203, 204, 232, 236, 246, 248, 304, 305, 346, 350, 357, 386, 423, 430, 434, 439, 447, 449, 705, 715, 716, 717, 956, 978, 992, 993, 1006, 1222, 1323, 1361, 1367"	"N"	"0.9999995019953861"	0	"na"	"N"	"0.3687676595580579"	0	"na"	"N"	"1.0"	0	"na"	"Y"	"0.024649467035636845"	0	""	""	""	"shared"
"QSOX2"	"QSOX2"	"QSOX2"	"nsp7"	"QSOX2"	"list26_COV_list4dataset2nonOrf"	"quiescin sulfhydryl oxidase 2"	"QSCN6L1|SOXN"	"no"	24	2097	699	0.20663	0.88694	0.1456	0.7046	0.67587	1	0.6123	1	1	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"QSOX2"	"ENSG00000165661.16"	"ENST00000455222.1"	17	283	95.75971731	0.177627444	0.3308	0.91996	0.91996	-2333.494261	-2333.494261	1	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	1260	420	0.2796	0.48719	0.0958	0.3426	0.053471	0.3601675	0.11783	0.734170161290323	0.16321	1	0.944	6.84638	4	"63_N_0.901,200_P_0.924,245_S_0.919,383_D_0.965"	"QSOX2"	"QSOX2_sequences_filtered_longestORFs_mafft_mincov_prank"	"QSOX2_all"	1379	24	"0.198021545110"	"0.196"	"Y"	"0.0014"	13	"619, 621, 660, 859, 867, 966, 971, 975, 1102, 1239, 1262, 1315, 1322"	"N"	"0.9999991493690666"	0	"na"	"N"	"0.9999947352000511"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.05059006833084182"	0	"na"	"QSOX2_sequences_filtered_longestORFs_mafft_prank"	"QSOX2"	1759	10	"0.174916503505"	"0.185"	"Y"	0	46	"203, 206, 213, 246, 302, 548, 256, 307, 671, 299, 475, 484, 488, 494, 552, 563, 710, 639, 665, 666, 711, 797, 801, 802, 818, 820, 892, 1040, 1041, 1053, 1055, 1059, 1060, 1068, 1089, 1095, 1131, 1136, 1446, 1490, 1507, 1534, 1543, 1557, 1569, 1693"	"N"	"0.9999987586905691"	0	"na"	"N"	"0.46478328146480163"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.5694980045294837"	0	"na"	""	""	"shared"
"RAB10"	"RAB10"	"RAB10"	"nsp7"	"RAB10"	"list24_COV_list2nonOrf"	"RAB10, member RAS oncogene family"	"-"	"no"	24	603	201	0.01254	0.14137	0.0022	0.179	1	1	1	1	0.99981	1	NA	NA	NA	""	"RAB10"	"ENSMLUG00000009937.2"	"ENSMLUT00000009931.2"	4	201	87.56218905	0.949840879	0.0764	3.28637	11.64957	-1449.293237	-1442.149102	0.000789481	-1446.23852	0.004238195	2	"K136, S18"	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"RAB10"	0.991187256	1	""	NA	NA	NA	""	""	504	168	0.03665	0.08073	0.0029	0.0801	1	1	0.96527	1	0.99998	1	NA	NA	NA	""	"RAB10"	"RAB10_sequences_filtered_longestORFs_D179gp1_prank"	"RAB10_179-1"	298	18	"0.183203580220"	"0.167"	"N"	"0.8383"	0	"na"	"N"	"0.9998517557629133"	0	"na"	"N"	"0.9778259585062402"	0	"na"	"N"	"0.9066489037539605"	0	"na"	"N"	"0.887807800762026"	0	"na"	"RAB10_sequences_filtered_longestORFs_D230gp2_prank"	"RAB10_230-2"	252	12	"0.223251295327"	"0.241"	"N"	0.764	0	"na"	"N"	"0.9999995267941113"	0	"na"	"N"	"0.9992598280309021"	0	"na"	"N"	"1.0"	0	"na"	"N"	"1.0"	0	"na"	""	""	"shared"
"RAB14"	"RAB14"	"RAB14"	"nsp7"	"RAB14"	"list26_COV_list4dataset2nonOrf"	"RAB14, member RAS oncogene family"	"FBP|RAB-14"	"no"	24	648	216	1e-04	0.14521	0	0.1768	0.99535	1	1	1	0.99934	1	NA	NA	NA	""	"RAB14"	"ENSMLUG00000009818.2"	"ENSMLUT00000009814.2"	6	216	98.61111111	NA	0.1122	0.12105	0.12105	-969.858557	-969.859346	0.999211311	NA	NA	NA	""	"RAB14"	"ENSG00000119396.10"	"ENST00000451303.1"	6	181	83.97790055	0.056879213	4.361	118.74761	118.74786	-2021.457931	-2021.458026	0.999905005	NA	NA	NA	""	"RAB14"	1	1	""	NA	NA	NA	""	""	579	193	1e-04	0.0741	0	0.1017	1	1	1	1	0.99961	1	NA	NA	NA	""	"RAB14"	"RAB14_sequences_filtered_longestORFs_mafft_mincov_prank_part1_prank"	"RAB14_all_part1"	254	24	"0.052888426522"	"0.708"	"Y"	"0.0000"	2	"148, 150"	"N"	"0.40730452460593103"	0	"na"	"Y"	"0.00019146069674151985"	4	"148, 150, 157, 160"	"N"	"0.5096658316912588"	0	"na"	"Y"	"0.015560805410051986"	0	""	"RAB14_sequences_filtered_longestORFs_mafft_prank"	"RAB14"	215	12	"0.001000000000"	"0.000"	"N"	1	0	"na"	"N"	"0.999999999998181"	0	"na"	"N"	"0.9994603195966442"	0	"na"	"N"	"0.9990004998333987"	0	"na"	"N"	"0.9990004998333987"	0	"na"	""	""	"shared"
"RAB18"	"RAB18"	"RAB18"	"nsp7"	"RAB18"	"list26_COV_list4dataset2nonOrf"	"RAB18, member RAS oncogene family"	"RAB18LI1|WARBM3"	"no"	24	708	236	0.17802	0.30731	0.0468	0.2628	0.017166	0.106595322580645	0.030943	0.165459097222222	1	1	9.427	2.66212	2	"67_Q_0.955,83_I_0.988"	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"RAB18"	"ENSG00000099246.16"	"ENST00000611151.4"	8	183	78.1420765	NA	0.0772	50.06601	50.06601	-1098.885766	-1098.886007	0.999759029	NA	NA	NA	""	"RAB18"	0.159860625	1	""	NA	NA	NA	""	""	639	213	0.24266	0.26468	0.0494	0.2034	0.0083667	0.0920337	0.02785	0.26805625	0.0098141	0.136910125	1.061	24.99888	2	"56_Q_1.000,72_I_0.999"	"RAB18"	"RAB18_sequences_filtered_longestORFs_mafft_mincov_prank"	"RAB18_all"	605	23	"0.162891920389"	"0.203"	"Y"	"0.0000"	4	"55, 56, 254, 287"	"N"	"0.9999999772123831"	0	"na"	"N"	"0.5621434944866635"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.22313016014842982"	0	"na"	"RAB18_sequences_filtered_longestORFs_mafft_prank"	"RAB18"	438	12	"0.080104837126"	"0.155"	"Y"	0	1	"437"	"Y"	"0.018516087317630797"	1	"334"	"Y"	"4.0106557145248056e-07"	2	"191, 334"	"Y"	"0.00013302147188878514"	1	"334"	"Y"	"0.00011335342106918821"	2	"191, 334"	"PS triggered by isoforms (or dupl -would need check) "	""	"shared"
"RAB1A"	"RAB1A"	"RAB1A"	"nsp7"	"RAB1A"	"list24_COV_list2nonOrf"	"RAB1A, member RAS oncogene family"	"RAB1|YPT1"	"no"	24	621	207	0.12597	0.16359	0.0185	0.1468	1	1	1	1	1	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"RAB1A"	"ENSG00000138069.16"	"ENST00000409751.1"	9	174	82.75862069	0.499843608	0.1626	6.55767	9.93272	-1539.230194	-1538.975128	0.774865355	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	558	186	0.32499	0.07922	0.0173	0.0532	0.32736	1	0.60497	1	0.619	1	NA	NA	NA	""	"RAB1A"	"RAB1A_sequences_filtered_longestORFs_mafft_mincov_prank"	"RAB1A_all"	506	23	"0.071955603138"	"0.068"	"Y"	"0.0002"	1	"258"	"N"	"0.6733332828164793"	0	"na"	"Y"	"0.022835370766341775"	1	"7"	"N"	"1.0"	0	"na"	"Y"	"0.0015884445690762155"	1	"7"	"RAB1A_sequences_filtered_longestORFs_mafft_prank"	"RAB1A"	248	12	"0.008701779692"	"0.013"	"N"	1	0	"na"	"N"	"0.9999991876894572"	0	"na"	"N"	"0.9965697068625546"	0	"na"	"N"	"1.0"	0	"na"	"N"	"1.0"	0	"na"	""	""	"shared"
"RAB2A"	"RAB2A"	"RAB2A"	"nsp7"	"RAB2A"	"list26_COV_list4dataset2nonOrf"	"RAB2A, member RAS oncogene family"	"LHX|RAB2"	"no"	23	639	213	0.01381	0.13108	0.0022	0.1564	1	1	1	1	0.9999	1	NA	NA	NA	""	"RAB2A"	"ENSMLUG00000002855.2"	"ENSMLUT00000002854.2"	3	213	89.6713615	0.086657441	3.2719	2.06104	2.08099	-1254.284249	-1254.161503	0.884488294	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"RAB2A"	0.936556195	1	""	NA	NA	NA	""	""	561	187	0.03013	0.06406	0.0024	0.0788	1	1	1	1	1	1	NA	NA	NA	""	"RAB2A"	"RAB2A_sequences_filtered_longestORFs_D450gp2_prank"	"RAB2A_450-2"	430	23	"0.049894825996"	"0.060"	"Y"	"0.0246"	0	"na"	"N"	"0.9999999998710791"	0	"na"	"N"	"0.9898001480708969"	0	"na"	"Y"	"0.00195767056459931"	0	""	"Y"	"0.0015461303778478448"	0	""	"RAB2A_sequences_filtered_longestORFs_D110gp1_prank"	"RAB2A_110-1"	244	12	"0.010122299972"	"0.009"	"N"	1	0	"na"	"N"	"0.9999999970061708"	0	"na"	"N"	"0.9999900238903716"	0	"na"	"N"	"1.0"	0	"na"	"N"	"1.0"	0	"na"	""	""	"shared"
"RAB5C"	"RAB5C"	"RAB5C"	"nsp7"	"RAB5C"	"list26_COV_list4dataset2nonOrf"	"RAB5C, member RAS oncogene family"	"L1880|RAB5CL|RAB5L|RABL"	"no"	24	750	250	0.0396	0.28983	0.0127	0.3195	1	1	1	1	0.9999	1	NA	NA	NA	""	"RAB5C"	"ENSMLUG00000012028.2"	"ENSMLUT00000012028.2"	4	231	98.7012987	0.023643529	0.1822	0.25581	0.25581	-1154.967665	-1154.967824	0.999841013	NA	NA	NA	""	"RAB5C"	"ENSG00000108774.14"	"ENST00000393860.7"	11	217	84.79262673	0.157854272	2.3996	7.12002	7.20502	-2592.156591	-2589.267353	0.055618578	NA	NA	NA	""	"RAB5C"	0.088837574	0.897128617	""	NA	NA	NA	""	""	555	185	0.03881	0.17157	0.0083	0.2127	1	1	1	1	0.9999	1	NA	NA	NA	""	"RAB5C"	"RAB5C_sequences_filtered_longestORFs_D189gp2_prank"	"RAB5C_189-2"	414	16	"0.029945684662"	"0.037"	"Y"	"0.0061"	1	"122"	"N"	"0.4176935942643851"	0	"na"	"Y"	"0.02946882819084406"	1	"122"	"N"	"0.20576922605988013"	0	"na"	"N"	"0.050488989306910946"	0	"na"	"RAB5C_sequences_filtered_longestORFs_D182gp1_prank"	"RAB5C_182-1"	259	12	"0.044332860160"	"0.047"	"N"	0.7699	1	"142"	"N"	"0.9999998383773476"	0	"na"	"N"	"0.93761480231155"	0	"na"	"N"	"0.2317722663433577"	0	"na"	"N"	"0.838617983337132"	0	"na"	""	""	"shared"
"RAB7A"	"RAB7A"	"RAB7A"	"nsp7"	"RAB7A"	"list24_COV_list2nonOrf"	"RAB7A, member RAS oncogene family"	"PRO2706|RAB7"	"no"	24	624	208	0.01158	0.15723	0.0022	0.1928	1	1	1	1	0.99987	1	NA	NA	NA	""	"RAB7A"	"ENSMLUG00000008454.2"	"ENSMLUT00000008464.2"	3	208	94.23076923	0.389627735	0.1863	0.43618	0.43832	-1137.365631	-1137.353927	0.988364225	NA	NA	NA	""	"RAB7A"	"ENSG00000075785.12"	"ENST00000485280.1"	17	92	96.73913043	NA	0.1067	0.08982	0.08982	-389.352117	-389.352321	0.999796021	NA	NA	NA	""	"RAB7A"	0.536592405	1	""	NA	NA	NA	""	""	519	173	1e-04	0.07921	0	0.1258	1	1	1	1	0.99957	1	NA	NA	NA	""	"RAB7A"	"RAB7A_sequences_filtered_longestORFs_mafft_mincov_prank"	"RAB7A_all"	454	24	"0.044385850106"	"0.061"	"Y"	"0.0010"	2	"267, 353"	"N"	"0.9999991343710571"	0	"na"	"N"	"0.9996041823454711"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.15198096442869868"	0	"na"	"RAB7A_sequences_filtered_longestORFs_mafft_prank"	"RAB7A"	331	12	"0.006214970371"	"0.016"	"N"	1	0	"na"	"N"	"0.9999985599914817"	0	"na"	"N"	"0.9996263598542194"	0	"na"	"N"	"0.9990004998336257"	0	"na"	"N"	"0.9990004998331715"	0	"na"	""	""	"shared"
"RAB8A"	"RAB8A"	"RAB8A"	"nsp7"	"RAB8A"	"list26_COV_list4dataset2nonOrf"	"RAB8A, member RAS oncogene family"	"MEL|RAB8"	"no"	24	624	208	0.01061	0.28587	0.0043	0.4035	0.79362	1	0.79117	1	0.96637	1	NA	NA	NA	""	"RAB8A"	"ENSMLUG00000006982.2"	"ENSMLUT00000006977.2"	3	208	98.55769231	0.167179383	3.5313	1.98028	2.21968	-1315.811747	-1313.992403	0.162132075	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	459	153	0.01589	0.13078	0.0029	0.1843	0.96303	1	0.98434	1	0.99892	1	NA	NA	NA	""	"RAB8A"	"RAB8A_sequences_filtered_longestORFs_D724gp2_prank"	"RAB8A_724-2"	468	23	"0.022529444092"	"0.022"	"N"	"1.0000"	0	"na"	"N"	"0.9999994011056489"	0	"na"	"N"	"0.5659519017090746"	0	"na"	"N"	"1.0"	0	"na"	"N"	"1.0"	0	"na"	"RAB8A_sequences_filtered_longestORFs_D247gp2_prank"	"RAB8A_247-2"	390	12	"0.053497369772"	"0.049"	"Y"	0.0129	2	"200, 346"	"N"	"0.9999988784667871"	0	"na"	"N"	"0.9991451123344435"	0	"na"	"N"	"0.9990004998331715"	0	"na"	"N"	"0.9990004998336257"	0	"na"	""	""	"shared"
"RAE1"	"RAE1"	"RAE1"	"orf6"	"RAE1"	"list23_COV_list1orf"	"ribonucleic acid export 1"	"MIG14|MRNP41|Mnrp41|dJ481F12.3|dJ800J21.1"	"no"	24	1107	369	0.00791	0.40585	0.0038	0.4796	1	1	1	1	0.99892	1	NA	NA	NA	""	"RAE1"	"ENSMLUG00000011112.1"	"ENSMLUT00000011117.1"	9	369	97.56097561	0.013932194	1.0889	1.36722	1.36724	-2952.601049	-2952.601896	0.999153359	NA	NA	NA	""	"RAE1"	"ENSG00000101146.12"	"ENST00000452119.1"	19	87	100	0.006947847	0.2844	0.37107	0.37113	-493.477386	-493.511378	0.966579237	NA	NA	NA	""	"RAE1"	0.985506504	1	""	NA	NA	NA	""	""	900	300	0.00677	0.2128	0.0016	0.2377	1	1	0.97368	1	0.99955	1	NA	NA	NA	""	"RAE1"	"RAE1_sequences_filtered_longestORFs_mafft_mincov_prank"	"RAE1_all"	956	24	"0.018212170402"	"0.020"	"Y"	"0.0314"	0	"na"	"N"	"0.9999999947176548"	0	"na"	"N"	"0.7952226447680236"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.9990004998331715"	0	"na"	"RAE1_sequences_filtered_longestORFs_mafft_prank"	"RAE1"	476	12	"0.011550421850"	"0.012"	"N"	0.5495	0	"na"	"N"	"0.9999999992505764"	0	"na"	"Y"	"0.009703953190307929"	1	"84"	"N"	"1.0"	0	"na"	"N"	"0.9990004998331715"	0	"na"	""	""	"shared"
"RALA"	"RALA"	"RALA"	"nsp7"	"RALA"	"list26_COV_list4dataset2nonOrf"	"RAS like proto-oncogene A"	"RAL"	"no"	24	624	208	0.00906	0.22301	0.0023	0.2537	1	1	1	1	0.99974	1	NA	NA	NA	""	"RALA"	"ENSMLUG00000009687.2"	"ENSMLUT00000009669.2"	4	207	81.64251208	0.399885613	0.4528	1.02844	1.02844	-1276.11971	-1276.11972	0.99999	NA	NA	NA	""	"RALA"	"ENSG00000006451.7"	"ENST00000434466.1"	9	164	79.26829268	0.773783832	0.3227	2.48609	2.60629	-1281.308936	-1280.469168	0.431810692	NA	NA	NA	""	"RALA"	1	1	""	NA	NA	NA	""	""	549	183	0.01431	0.1379	0.0025	0.173	1	1	1	1	0.99987	1	NA	NA	NA	""	"RALA"	"RALA_sequences_filtered_longestORFs_mafft_mincov_prank_part2_prank"	"RALA_all_part2"	215	25	"0.096781334415"	"0.095"	"N"	"1.0000"	1	"17"	"N"	"0.9999998606133528"	0	"na"	"N"	"0.9999948267631796"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.9811793622428007"	0	"na"	"RALA_sequences_filtered_longestORFs_D112gp1_prank"	"RALA_112-1"	206	12	"0.003695573472"	"0.004"	"N"	0.7222	0	"na"	"N"	"0.9999999962080892"	0	"na"	"N"	"0.9999994631977265"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.9990004998333987"	0	"na"	"yes dupl TB"	""	"shared"
"RAP1GDS1"	"RAP1GDS1"	"RAP1GDS1"	"nsp2"	"RAP1GDS1"	"list24_COV_list2nonOrf"	"Rap1 GTPase-GDP dissociation stimulator 1"	"GDS1|SmgGDS"	"no"	24	1827	609	0.08686	0.17102	0.0147	0.1693	1	1	1	1	0.99803	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"RAP1GDS1"	"ENSG00000138698.14"	"ENST00000514139.2"	5	101	94.05940594	0.582003659	0.1136	0.16559	0.16557	-469.004579	-469.004584	0.999995	NA	NA	NA	""	"RAP1GDS1"	1	1	""	NA	NA	NA	""	""	1707	569	0.07632	0.12971	0.01	0.1312	0.52455	1	0.62067	1	0.8167	1	NA	NA	NA	""	"RAP1GDS1"	"RAP1GDS1_sequences_filtered_longestORFs_mafft_mincov_prank"	"RAP1GDS1_all"	1157	24	"0.182272268296"	"0.166"	"Y"	"0.0000"	6	"550, 653, 798, 1055, 1074, 1081"	"Y"	"9.75681486532579e-68"	1	"107"	"Y"	"1.9880263266176278e-79"	1	"107"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"RAP1GDS1_sequences_filtered_longestORFs_mafft_prank"	"RAP1GDS1"	790	12	"0.127207844325"	"0.115"	"Y"	0	0	"na"	"Y"	"5.872399224899566e-29"	1	"2"	"Y"	"2.611186477612738e-36"	1	"2"	"Y"	"1.5055192914142404e-31"	1	"2"	"Y"	"5.2137953716818936e-33"	2	"2, 461"	"NO PS. Only triggered by M/A at codon 2."	""	"shared"
"RBM28"	"RBM28"	"RBM28"	"N"	"RBM28"	"list26_COV_list4dataset2nonOrf"	"RNA binding motif protein 28"	"ANES"	"no"	22	2307	769	0.34258	0.47328	0.1046	0.3052	0.42504	0.928785310734463	0.54944	1	0.72893	1	NA	NA	NA	""	"RBM28"	"ENSMLUG00000002186.2"	"ENSMLUT00000002190.2"	9	763	91.08781127	0.235335938	0.2569	0.78998	0.79964	-5494.801233	-5488.975374	0.002950269	-5494.088549	0.001384484	4	"G9, T538, G91, L618"	"RBM28"	"ENSG00000106344.8"	"ENST00000459726.1"	8	204	79.90196078	0.18206032	0.1638	0.29879	0.29879	-920.743821	-920.743821	1	NA	NA	NA	""	"RBM28"	0.722677185	1	""	NA	NA	NA	""	""	1950	650	0.39408	0.34188	0.0821	0.2084	0.22476	0.961473333333333	0.41473	1	0.47929	1	NA	NA	NA	""	"RBM28"	"RBM28_sequences_filtered_longestORFs_mafft_mincov_prank"	"RBM28_all"	1042	22	"0.328426149580"	"0.311"	"N"	"0.4597"	13	"72, 142, 151, 293, 306, 314, 383, 683, 715, 758, 781, 791, 996"	"N"	"0.9999993242392985"	0	"na"	"N"	"0.8502052545444388"	0	"na"	"N"	"0.173600256364976"	0	"na"	"N"	"0.11158150149347275"	0	"na"	"RBM28_sequences_filtered_longestORFs_mafft_prank"	"RBM28"	1044	12	"0.273591811038"	"0.249"	"N"	0.0582	6	"102, 266, 338, 367, 720, 901"	"N"	"0.999998611995633"	0	"na"	"N"	"0.09829807686258053"	0	"na"	"Y"	"0.03597251875340349"	1	"720"	"Y"	"0.006207481629437576"	1	"720"	"yes. Good aln by Prank. "	""	"shared"
"RBM41"	"RBM41"	"RBM41"	"nsp12"	"RBM41"	"list26_COV_list4dataset2nonOrf"	"RNA binding motif protein 41"	"-"	"no"	23	1242	414	0.25091	0.211	0.0395	0.1574	1	1	1	1	1	1	NA	NA	NA	""	"RBM41"	"ENSMLUG00000005943.2"	"ENSMLUT00000005943.2"	10	414	99.27536232	0.164119253	0.1646	0.4821	0.48227	-2731.000804	-2730.808618	0.825153376	NA	NA	NA	""	"RBM41"	"ENSG00000089682.16"	"ENST00000434854.1"	19	203	90.14778325	0.152327093	0.1286	0.35954	0.36015	-1078.840722	-1077.193702	0.192623071	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	1146	382	0.22717	0.1755	0.0316	0.1393	1	1	1	1	1	1	NA	NA	NA	""	"RBM41"	"RBM41_sequences_filtered_longestORFs_mafft_mincov_prank"	"RBM41_all"	1223	24	"0.312052480947"	"0.340"	"Y"	"0.0008"	8	"37, 167, 201, 874, 879, 880, 1007, 1217"	"N"	"0.2109063097851672"	0	"na"	"N"	"0.08505208405629817"	0	"na"	"N"	"0.059725273885798714"	0	"na"	"Y"	"0.00017390524083438558"	0	""	"RBM41_sequences_filtered_longestORFs_mafft_prank"	"RBM41"	673	12	"0.223739767189"	"0.227"	"N"	0.7329	2	"602, 608"	"N"	"0.9999970189945865"	0	"na"	"N"	"0.9997120617250892"	0	"na"	"N"	"0.9990004998331715"	0	"na"	"N"	"1.0"	0	"na"	""	""	"shared"
"RBX1"	"RBX1"	"RBX1"	"orf10"	"RBX1"	"list25_COV_list3dataset2orf"	"ring-box 1"	"BA554C12.1|RNF75|ROC1"	"no"	24	327	109	1e-04	0.16056	0	0.164	1	1	1	1	0.99971	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	261	87	1e-04	0.07561	0	0.0733	1	1	1	1	0.99989	1	NA	NA	NA	""	"RBX1"	"RBX1_sequences_filtered_longestORFs_mafft_mincov_prank_part2_prank"	"RBX1_all_part2"	567	24	"0.119128948301"	"0.152"	"Y"	"0.0209"	0	"na"	"N"	"0.9999997240120518"	0	"na"	"N"	"0.9998308519294604"	0	"na"	"Y"	"0.00825447336109025"	1	"450"	"Y"	"0.0003245730277967795"	2	"423, 450"	"RBX1_sequences_filtered_longestORFs_mafft_prank"	"RBX1"	148	12	"0.262676108294"	"0.243"	"N"	0.2864	4	"17, 59, 66, 129"	"N"	"0.9999998085004519"	0	"na"	"N"	"0.9997255824184248"	0	"na"	"N"	"1.0"	0	"na"	"N"	"1.0"	0	"na"	""	""	"shared"
"RDX"	"RDX"	"RDX"	"nsp13"	"RDX"	"list26_COV_list4dataset2nonOrf"	"radixin"	"DFNB24"	"no"	24	1818	606	0.04733	0.23036	0.0125	0.2643	1	1	1	1	0.99971	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"RDX"	0.664925023	1	""	NA	NA	NA	""	""	1602	534	0.0578	0.1471	0.0088	0.1527	1	1	1	1	0.9999	1	NA	NA	NA	""	"RDX"	"RDX_sequences_filtered_longestORFs_mafft_mincov_prank_part1_prank"	"RDX_all_part1"	2586	24	"na"	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"RDX_bat_select_mafft_prank"	"RDX"	677	11	"0.0708302878717671"	"0.065"	"Y"	0.0012	3	"2, 348, 608"	"N"	"0.999998452843843"	0	"na"	"Y"	"0.00870082277450124"	2	"348, 601"	"N"	"1.0"	0	"na"	"N"	"0.9464851479532084"	0	"na"	""	""	"shared"
"REEP5"	"REEP5"	"REEP5"	"M"	"REEP5"	"list24_COV_list2nonOrf"	"receptor accessory protein 5"	"C5orf18|D5S346|DP1|TB2|YOP1|Yip2e"	"no"	24	570	190	0.05899	0.29277	0.0195	0.3303	1	1	1	1	1	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"REEP5"	"ENSG00000129625.12"	"ENST00000504247.1"	15	100	96	0.148600334	0.1496	0.35671	0.36439	-565.263494	-565.198813	0.937366436	NA	NA	NA	""	"REEP5"	1	1	""	NA	NA	NA	""	""	441	147	0.06432	0.17395	0.0127	0.1969	0.93106	1	0.86352	1	0.99626	1	NA	NA	NA	""	"REEP5"	"REEP5_sequences_filtered_longestORFs_mafft_mincov_prank_part1_prank"	"REEP5_all_part1"	1006	24	"0.086498435715"	"0.107"	"N"	"1.0000"	2	"866, 877"	"N"	"0.9999991875705408"	0	"na"	"N"	"0.7813142126809386"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.696978998466959"	0	"na"	"REEP5_sequences_filtered_longestORFs_duplication_remainingsequences_prank"	"REEP5_rem"	284	7	"0.309153558643"	"0.255"	"N"	0.9701	3	"79, 81, 96"	"N"	"0.9999999417607358"	0	"na"	"N"	"0.86557876645096"	0	"na"	"N"	"0.7174873228543663"	0	"na"	"N"	"0.3937653915324635"	0	"na"	""	""	"shared"
"REEP6"	"REEP6"	"REEP6"	"M"	"REEP6"	"list26_COV_list4dataset2nonOrf"	"receptor accessory protein 6"	"C19orf32|DP1L1|REEP6.1|REEP6.2|RP77|TB2L1|Yip2f"	"no"	24	555	185	0.19045	0.58601	0.1047	0.5499	1	1	1	1	0.99316	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"REEP6"	"ENSG00000115255.10"	"ENST00000395484.4"	13	140	96.42857143	0.350200437	0.1831	0.57981	0.58542	-928.791184	-928.544205	0.781157098	NA	NA	NA	""	"REEP6"	1	1	""	NA	NA	NA	""	""	324	108	0.27398	0.30085	0.0593	0.2165	0.23693	0.983861290322581	0.47531	1	0.49332	1	NA	NA	NA	""	"REEP6"	"REEP5_sequences_filtered_longestORFs_mafft_mincov_prank_part2_prank"	"REEP5_all_part2"	580	16	"1.007695000550"	"1.111"	"Y"	"0.0001"	12	"48, 62, 73, 109, 222, 401, 416, 428, 484, 491, 496, 555"	"Y"	"0.0004223018320237546"	1	"222"	"Y"	"0.002160428267496892"	0	""	"Y"	"0.00033985211189276206"	1	"222"	"Y"	"0.00032198680226961615"	3	"132, 222, 416"	"REEP6_LA_bat_select_mafft_prank"	"REEP6"	382	10	"0.295176226245928"	"0.237"	"N"	0.6966	1	"378"	"N"	"0.675870221654513"	0	"na"	"N"	"0.198620091514709"	0	"na"	"N"	"0.6616622828278411"	0	"na"	"N"	"0.31505753690349364"	0	"na"	""	""	"shared"
"RETREG3"	"RETREG3"	"FAM134C"	"orf9c"	"FAM134C"	"list24_COV_list2nonOrf"	"reticulophagy regulator family member 3"	"-"	"no"	24	1401	467	0.18477	0.3476	0.0493	0.2669	0.41476	0.917716091954023	0.5193	1	0.71832	1	NA	NA	NA	""	"RETREG3"	"ENSMLUG00000001002.2"	"ENSMLUT00000001011.2"	13	467	81.37044968	0.187634062	0.2437	0.83137	0.84208	-3170.863884	-3168.40824	0.085807917	NA	NA	NA	""	"RETREG3"	"ENSG00000141699.10"	"ENST00000590541.1"	19	82	95.12195122	0.197804078	0.2055	0.45293	0.45293	-499.872999	-499.873027	0.999972	NA	NA	NA	""	"FAM134C"	0.383568347	1	""	NA	NA	NA	""	""	1164	388	0.17208	0.21804	0.0299	0.1739	1	1	1	1	0.99988	1	NA	NA	NA	""	"RETREG3"	"RETREG3_sequences_filtered_longestORFs_mafft_mincov_prank"	"RETREG3_all"	500	24	"0.184997088890"	"0.185"	"Y"	"0.0084"	2	"233, 412"	"N"	"0.9624418484439029"	0	"na"	"N"	"0.3644791055063258"	0	"na"	"N"	"0.8555591903710621"	0	"na"	"N"	"0.2928777478112756"	0	"na"	"RETREG3_sequences_filtered_longestORFs_mafft_prank"	"RETREG3"	567	12	"0.191546856009"	"0.204"	"N"	0.8222	2	"225, 478"	"N"	"0.9999998216717517"	0	"na"	"N"	"0.29974396289270483"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.16880686976312853"	0	"na"	"allows annotation"	""	"shared"
"RHOA"	"RHOA"	"RHOA"	"nsp7"	"RHOA"	"list26_COV_list4dataset2nonOrf"	"ras homolog family member A"	"ARH12|ARHA|RHO12|RHOH12"	"no"	23	582	194	0.04509	0.25785	0.0122	0.2715	1	1	1	1	1	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"RHOA"	"ENSG00000067560.10"	"ENST00000445425.4"	18	129	88.37209302	0.071970158	2.0946	107.0399	106.9229	-1606.628616	-1601.617051	0.006660472	-1602.054288	0.349719687	NA	""	"RHOA"	0.997743245	1	""	NA	NA	NA	""	""	504	168	0.0242	0.20048	0.0056	0.2296	1	1	1	1	1	1	NA	NA	NA	""	"RHOA"	"RHOA_sequences_filtered_longestORFs_D615gp1_prank"	"RHOA_615-1"	343	15	"0.137136178182"	"0.137"	"N"	"1.0000"	0	"na"	"N"	"0.999999994000973"	0	"na"	"N"	"0.9999972407217098"	0	"na"	"N"	"1.0"	0	"na"	"N"	"1.0"	0	"na"	"RHOA_sequences_filtered_longestORFs_D151gp1_prank"	"RHOA_151-1"	200	9	"0.001000000000"	"0.000"	"N"	1	0	"na"	"N"	"0.999999999994543"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.9980019986673803"	0	"na"	"N"	"0.9990004998333987"	0	"na"	""	""	"shared"
"RIPK1"	"RIPK1"	"RIPK1"	"nsp12"	"RIPK1"	"list24_COV_list2nonOrf"	"receptor interacting serine/threonine kinase 1"	"RIP|RIP-1|RIP1"	"no"	24	2016	672	0.38791	0.79006	0.182	0.4692	0.031589	0.162156866666667	0.030341	0.165459097222222	0.10033	0.56012	17.918	1.58393	1	"664_H_0.951"	"RIPK1"	"ENSMLUG00000016163.2"	"ENSMLUT00000016166.2"	11	669	94.76831091	0.230770476	0.5873	1.61018	1.63436	-6898.757894	-6891.727408	0.000884502	-6897.079258	0.001069215	1	"L551"	"RIPK1"	"ENSG00000137275.13"	"ENST00000380409.2"	15	672	99.10714286	0.277738169	0.2016	0.62393	0.6255	-5051.481263	-5051.29152	0.82717169	NA	NA	NA	""	"RIPK1"	0.805490382	1	""	NA	NA	NA	""	""	1521	507	0.44562	0.52472	0.1298	0.2913	0.020117	0.184405833333333	0.04123	0.369152325581395	0.067245	0.663828846153846	8.033	2.75059	0	"noneOver_0.9"	"RIPK1"	"RIPK1_sequences_filtered_longestORFs_quickclean_mafft_prank"	"RIPK1"	804	24	"0.43700247549172"	"0.412"	"N"	"0.0863"	20	"55, 95, 103, 277, 348, 377, 404, 565, 574, 581, 584, 586, 613, 617, 667, 690, 695, 707, 725, 797"	"Y"	"0.0460095197916455"	0	""	"Y"	"0.00120342633832725"	1	"797"	"Y"	"0.024551066100545648"	1	"797"	"Y"	"0.0002102948425097665"	1	"797"	"RIPK1_sequences_filtered_longestORFs_mafft_prank"	"RIPK1"	822	12	"0.352982795589"	"0.331"	"Y"	0.0075	15	"16, 127, 230, 276, 281, 288, 372, 402, 482, 484, 490, 633, 638, 697, 821"	"N"	"0.5725600367528054"	0	"na"	"N"	"0.07959362938950036"	0	"na"	"N"	"0.13439124424530172"	0	"na"	"Y"	"0.006402927316412248"	1	"818"	"PS "	""	"shared"
"RNF41"	"RNF41"	"RNF41"	"nsp15"	"RNF41"	"list26_COV_list4dataset2nonOrf"	"ring finger protein 41"	"FLRF|NRDP1|SBBI03"	"no"	24	954	318	0.00561	0.24274	0.0015	0.2718	1	1	0.99375	1	0.9998	1	NA	NA	NA	""	"RNF41"	"ENSMLUG00000006057.2"	"ENSMLUT00000006056.2"	14	318	98.11320755	0.096264505	0.5611	2.00581	2.53274	-3299.790746	-3312.670484	2.55e-06	-3299.446508	2.71e-07	3	"C120, I194, R178"	"RNF41"	"ENSG00000181852.17"	"ENST00000615206.4"	17	318	99.05660377	NA	0.1463	0.19289	0.1929	-1584.778166	-1584.779342	0.998824691	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	747	249	1e-04	0.1218	0	0.1501	1	1	1	1	1	1	NA	NA	NA	""	"RNF41"	"RNF41_sequences_filtered_longestORFs_mafft_mincov_prank"	"RNF41_all"	480	23	"0.003104031507"	"0.003"	"N"	"0.2850"	0	"na"	"N"	"0.9999999999974989"	0	"na"	"N"	"0.9999999403173678"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.9990004998336257"	0	"na"	"RNF41_sequences_filtered_longestORFs_mafft_prank"	"RNF41"	317	12	"0.010419376844"	"0.010"	"N"	1	0	"na"	"N"	"0.9999999999888587"	0	"na"	"N"	"0.999977440892537"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.9990004998333987"	0	"na"	""	""	"shared"
"RPL36"	"RPL36"	"RPL36"	"N"	"RPL36"	"list26_COV_list4dataset2nonOrf"	"ribosomal protein L36"	"L36"	"no"	24	318	106	0.01125	0.55677	0.0114	1.0159	1	1	1	1	0.99933	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	216	72	1e-04	0.38112	1e-04	0.5947	1	1	1	1	1	1	NA	NA	NA	""	"RPL36"	"RPL36_sequences_filtered_longestORFs_mafft_mincov_prank"	"RPL36_all"	628	24	"0.483461312002"	"0.362"	"Y"	"0.0001"	14	"337, 361, 371, 394, 417, 418, 431, 432, 582, 585, 596, 606, 607, 615"	"N"	"0.9999993193635006"	0	"na"	"N"	"0.5593643172171061"	0	"na"	"Y"	"2.728305563944152e-08"	5	"582, 585, 606, 607, 620"	"Y"	"1.8456858262039173e-10"	6	"230, 582, 585, 606, 607, 620"	"RPL36_sequences_filtered_longestORFs_mafft_prank"	"RPL36"	276	12	"0.237378633047"	"0.146"	"N"	1	0	"na"	"N"	"0.9999998049668383"	0	"na"	"N"	"0.3601113013498369"	0	"na"	"N"	"1.0"	0	"na"	"Y"	"0.01942877625150621"	0	""	""	""	"shared"
"RRP9"	"RRP9"	"RRP9"	"N"	"RRP9"	"list26_COV_list4dataset2nonOrf"	"ribosomal RNA processing 9, U3 small nucleolar RNA binding protein"	"RNU3IP2|U3-55K"	"no"	24	1431	477	0.11615	0.64947	0.0732	0.6301	0.73716	1	0.9087	1	1	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"RRP9"	"ENSG00000114767.6"	"ENST00000232888.6"	15	476	98.1092437	0.092429478	0.2269	0.48016	0.48015	-3052.516617	-3052.516695	0.999922003	NA	NA	NA	""	"RRP9"	1	1	""	NA	NA	NA	""	""	984	328	0.109	0.36934	0.0421	0.3859	1	1	1	1	1	1	NA	NA	NA	""	"RRP9"	"RRP9_sequences_filtered_longestORFs_mafft_mincov_prank"	"RRP9_all"	584	24	"0.155682509754"	"0.107"	"N"	"0.6394"	6	"38, 40, 65, 162, 207, 329"	"N"	"0.9999991275330271"	0	"na"	"N"	"0.6244806248771296"	0	"na"	"N"	"1.0"	0	"na"	"Y"	"0.03568588666049016"	1	"126"	"RRP9_sequences_filtered_longestORFs_mafft_prank"	"RRP9"	566	11	"0.057771262846"	"0.052"	"N"	1	3	"87, 457, 557"	"N"	"0.9999999895417204"	0	"na"	"Y"	"0.006302127209825691"	2	"88, 523"	"N"	"1.0"	0	"na"	"Y"	"0.007335717892413876"	0	""	""	""	"shared"
"RTN4"	"RTN4"	"RTN4"	"M"	"RTN4"	"list26_COV_list4dataset2nonOrf"	"reticulon 4"	"ASY|NI220/250|NOGO|NSP|NSP-CL|Nbla00271|Nbla10545|RTN-X|RTN4-A|RTN4-B1|RTN4-B2|RTN4-C"	"no"	25	3588	1196	0.39144	0.49586	0.1138	0.2907	1	1	1	1	1	1	NA	NA	NA	""	"RTN4"	"ENSMLUG00000009620.2"	"ENSMLUT00000009615.2"	3	1182	93.82402707	0.35406443	0.2724	0.57599	1.48161	-6918.969966	-6896.923627	2.66e-10	-6918.554509	4.79e-11	3	"Q169, R170, P167"	"RTN4"	"ENSG00000115310.17"	"ENST00000402434.6"	11	346	94.79768786	0.191128322	0.2098	0.53405	0.53248	-2201.323838	-2201.097352	0.797330505	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	2940	980	0.48069	0.34429	0.0888	0.1848	1	1	1	1	1	1	NA	NA	NA	""	"RTN4"	"RTN4_sequences_filtered_longestORFs_mafft_mincov_prank"	"RTN4_all"	8139	25	"0.171867113055"	"0.312"	"Y"	"0.0000"	7	"239, 564, 2805, 5381, 6195, 8068, 8111"	"N"	"0.9999997229961466"	0	"na"	"N"	"0.9999601599127923"	0	"na"	"N"	"0.0713612695564276"	0	"na"	"Y"	"0.04221414181437675"	0	""	"RTN4_sequences_filtered_longestORFs_mafft_prank"	"RTN4"	2805	12	"0.125832250975"	"0.407"	"Y"	0.0174	12	"1855, 1915, 1917, 1948, 1969, 1982, 2231, 2430, 2440, 2508, 2515, 2804"	"N"	"0.9999991902524111"	0	"na"	"N"	"0.998503285710714"	0	"na"	"N"	"0.6281351051895494"	0	"na"	"N"	"0.15945396804603182"	0	"na"	""	""	"shared"
"SAAL1"	"SAAL1"	"SAAL1"	"M"	"SAAL1"	"list26_COV_list4dataset2nonOrf"	"serum amyloid A like 1"	"SPACIA1"	"yes"	24	1431	477	0.28675	0.45035	0.0865	0.3016	9.2123e-06	0.000272825807692308	2.6072e-05	0.00071698	5.4487e-05	0.00161365346153846	3.263	4.79472	6	"14_C_0.998,15_D_0.996,17_Q_0.949,57_S_0.939,376_T_0.908,455_H_0.981"	"SAAL1"	"ENSMLUG00000008022.2"	"ENSMLUT00000008033.2"	9	474	97.0464135	0.171414604	0.3324	0.7726	0.77317	-3561.95974	-3561.937062	0.977577213	NA	NA	NA	""	"SAAL1"	"ENSG00000166788.9"	"ENST00000530180.1"	17	209	86.12440191	0.247077178	0.1884	0.41042	0.41683	-1145.791328	-1143.177301	0.073239016	NA	NA	NA	""	"SAAL1"	1	1	""	NA	NA	NA	""	""	1224	408	0.27904	0.26897	0.0511	0.1832	0.44278	1	0.66234	1	0.74608	1	NA	NA	NA	""	"SAAL1"	"SAAL1_sequences_filtered_longestORFs_mafft_mincov_prank"	"SAAL1_all"	906	24	"0.290676205004"	"0.301"	"Y"	"0.0002"	4	"84, 201, 226, 466"	"N"	"0.20683626125030372"	0	"na"	"Y"	"0.02973495952426878"	6	"79, 366, 466, 552, 556, 700"	"Y"	"0.036443214389920243"	0	""	"Y"	"0.0024713270633736194"	0	""	"SAAL1_sequences_filtered_longestORFs_mafft_prank"	"SAAL1"	507	12	"0.261629641069"	"0.266"	"Y"	0	7	"119, 156, 195, 330, 488, 499, 500"	"N"	"0.2584666678037798"	0	"na"	"N"	"0.06451407067002299"	0	"na"	"N"	"0.09965909171569372"	0	"na"	"N"	"0.349238573021875"	0	"na"	""	""	"shared"
"SBNO1"	"SBNO1"	"SBNO1"	"nsp12"	"SBNO1"	"list24_COV_list2nonOrf"	"strawberry notch homolog 1"	"MOP3|Sno"	"no"	24	4188	1396	0.07513	0.35738	0.0296	0.3938	1	1	1	1	1	1	NA	NA	NA	""	"SBNO1"	"ENSMLUG00000017159.2"	"ENSMLUT00000017165.2"	11	1393	91.74443647	0.020893622	0.515	1.06225	1.06226	-10339.1447	-10339.14578	0.998917586	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"SBNO1"	1	1	""	NA	NA	NA	""	""	3594	1198	0.08783	0.23818	0.0235	0.2676	1	1	1	1	1	1	NA	NA	NA	""	"SBNO1"	"SBNO1_sequences_filtered_longestORFs_mafft_mincov_prank"	"SBNO1_all"	3019	22	"0.069039630102"	"0.064"	"Y"	"0.0000"	9	"131, 845, 1072, 2514, 2807, 2948, 2949, 2984, 2985"	"N"	"0.9999996739734874"	0	"na"	"Y"	"0.01503334418429866"	1	"2514"	"N"	"0.8105842459708948"	0	"na"	"N"	"1.0"	0	"na"	"SBNO1_sequences_filtered_longestORFs_mafft_prank"	"SBNO1"	1580	12	"0.026378112791"	"0.026"	"Y"	0	1	"1212"	"N"	"0.9999998961866422"	0	"na"	"Y"	"0.0005303875917709041"	3	"252, 856, 862"	"N"	"1.0"	0	"na"	"N"	"0.9990004998331715"	0	"na"	""	""	"shared"
"SCAP"	"SCAP"	"SCAP"	"orf9c"	"SCAP"	"list24_COV_list2nonOrf"	"SREBF chaperone"	"-"	"no"	22	3840	1280	0.07872	0.4931	0.0419	0.5329	0.33908	0.791186666666667	0.06311	0.27300393258427	0.69263	1	1.209	1.9665	2	"600_H_0.920,904_T_0.911"	"SCAP"	"ENSMLUG00000004086.2"	"ENSMLUT00000004092.2"	9	1281	94.84777518	0.108448467	0.3923	1.23585	1.26031	-10360.59232	-10358.03438	0.07746423	NA	NA	NA	""	"SCAP"	"ENSG00000114650.18"	"ENST00000428413.5"	4	353	98.01699717	0.435790934	0.0736	0.18447	0.18947	-1736.169015	-1735.761127	0.665053361	NA	NA	NA	""	"SCAP"	1	1	""	NA	NA	NA	""	""	2823	941	0.08702	0.22967	0.022	0.2531	0.99471	1	1	1	0.99999	1	NA	NA	NA	""	"SCAP"	"SCAP_sequences_filtered_longestORFs_mafft_mincov_prank"	"SCAP_all"	1756	24	"0.103990024565"	"0.082"	"N"	"0.6729"	0	"na"	"N"	"0.9999999590691013"	0	"na"	"Y"	"0.00582198304793135"	1	"1256"	"N"	"1.0"	0	"na"	"Y"	"7.581270092171557e-08"	1	"1256"	"SCAP_sequences_filtered_longestORFs_mafft_prank"	"SCAP"	1286	10	"0.084236433526"	"0.061"	"N"	0.0636	4	"687, 934, 1044, 1074"	"N"	"0.9999995101171698"	0	"na"	"Y"	"0.0033378470176263285"	1	"863"	"N"	"1.0"	0	"na"	"N"	"0.11281567351170993"	0	"na"	""	""	"shared"
"SCARB1"	"SCARB1"	"SCARB1"	"nsp7"	"SCARB1"	"list26_COV_list4dataset2nonOrf"	"scavenger receptor class B member 1"	"CD36L1|CLA-1|CLA1|HDLQTL6|SR-BI|SRB1"	"no"	25	1530	510	0.10383	0.62207	0.0784	0.7554	1	1	1	1	1	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"SCARB1"	"ENSG00000073060.15"	"ENST00000545493.1"	14	146	100	0.221176368	0.1874	0.49354	0.49355	-910.195166	-910.195401	0.999765028	NA	NA	NA	""	"SCARB1"	0.06378625	0.750735805	""	NA	NA	NA	""	""	1059	353	0.12908	0.34857	0.0509	0.3941	1	1	1	1	1	1	NA	NA	NA	""	"SCARB1"	"SCARB1_sequences_filtered_longestORFs_mafft_mincov_prank_part2_prank"	"SCARB1_all_part2"	1623	24	"0.094947443872"	"0.131"	"Y"	"0.0000"	11	"549, 607, 630, 703, 733, 911, 965, 993, 1432, 1531, 1622"	"N"	"0.9999999983037924"	0	"na"	"N"	"0.42297612986890076"	0	"na"	"Y"	"7.551887340080195e-27"	1	"1531"	"na"	"na"	0	"na"	"SCARB1_sequences_filtered_longestORFs_mafft_prank"	"SCARB1"	763	10	"0.218091439138"	"0.155"	"Y"	0	19	"5, 7, 132, 133, 137, 157, 176, 236, 277, 417, 476, 509, 592, 674, 688, 724, 740, 741, 763"	"N"	"0.9999998503026403"	0	"na"	"N"	"0.4515726499701246"	0	"na"	"N"	"1.0"	0	"na"	"Y"	"0.0002460440433622239"	1	"763"	"PS. Splicing variants"	""	"shared"
"SCCPDH"	"SCCPDH"	"SCCPDH"	"nsp7"	"SCCPDH"	"list24_COV_list2nonOrf"	"saccharopine dehydrogenase (putative)"	"CGI-49|NET11"	"no"	24	1290	430	0.26038	0.57846	0.1053	0.4043	1	1	1	1	1	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"SCCPDH"	"ENSG00000143653.9"	"ENST00000366510.3"	15	430	97.6744186	0.196343201	0.1627	0.45905	0.45905	-2886.510879	-2886.510885	0.999994	NA	NA	NA	""	"SCCPDH"	0.002019556	0.09129021	""	NA	NA	NA	""	""	999	333	0.29684	0.36519	0.074	0.2492	1	1	1	1	1	1	NA	NA	NA	""	"SCCPDH"	"SCCPDH_sequences_filtered_longestORFs_mafft_mincov_prank"	"SCCPDH_all"	717	23	"0.297146699972"	"0.323"	"Y"	"0.0242"	4	"203, 437, 632, 635"	"N"	"0.16718066834449946"	0	"na"	"N"	"0.05798336825737528"	0	"na"	"Y"	"0.03951796106177764"	1	"590"	"Y"	"0.015732919159708345"	1	"590"	"SCCPDH_sequences_filtered_longestORFs_mafft_prank"	"SCCPDH"	654	12	"0.281129406592"	"0.291"	"N"	0.1315	11	"46, 70, 87, 228, 229, 231, 238, 327, 379, 594, 644"	"N"	"0.0747269312417341"	0	"na"	"Y"	"0.005045637026761042"	1	"367"	"Y"	"0.047028569511397056"	0	""	"Y"	"0.0063709925831932045"	1	"367"	"PS ok. Splice variants"	""	"shared"
"SDF2"	"SDF2"	"SDF2"	"orf8"	"SDF2"	"list25_COV_list3dataset2orf"	"stromal cell derived factor 2"	"-"	"no"	23	636	212	0.13507	0.3131	0.0364	0.2694	1	1	1	1	1	1	NA	NA	NA	""	"SDF2"	"ENSMLUG00000012419.2"	"ENSMLUT00000012419.2"	15	212	98.58490566	0.06852197	0.335	0.90704	0.90706	-1790.437725	-1790.438975	0.998750781	NA	NA	NA	""	"SDF2"	"ENSG00000132581.9"	"ENST00000591903.1"	19	105	88.57142857	0.073449063	4.3067	9.69242	9.69891	-726.542628	-726.543552	0.999076427	NA	NA	NA	""	"SDF2"	0.997743245	1	""	NA	NA	NA	""	""	522	174	0.10167	0.24504	0.0225	0.2215	1	1	0.96895	1	1	1	NA	NA	NA	""	"SDF2"	"SDF2_sequences_filtered_longestORFs_mafft_mincov_prank"	"SDF2_all"	364	23	"0.091229165614"	"0.089"	"N"	"0.7862"	0	"na"	"N"	"0.9999997541511068"	0	"na"	"N"	"0.9999998942125841"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.9990004998331715"	0	"na"	"SDF2_bat_select_mafft_prank"	"SDF2"	246	12	"0.082797829312181"	"0.080"	"N"	0.2145	0	"na"	"N"	"0.999999439606811"	0	"na"	"N"	"0.999999993020992"	0	"na"	"N"	"1.0"	0	"na"	"N"	"1.0"	0	"na"	""	""	"shared"
"SELENOS"	"SELENOS"	"VIMP"	"nsp7"	"VIMP"	"list26_COV_list4dataset2nonOrf"	"selenoprotein S protein-coding"	"AD-015|ADO15|SBBI8|SELS|SEPS1|VIMP"	"no"	24	567	189	0.21832	0.68129	0.1108	0.5076	0.93424	1	0.91359	1	0.99621	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"SELENOS"	"ENSG00000131871.14"	"ENST00000528346.1"	9	218	83.02752294	0.295972578	0.1231	0.34109	0.34109	-1105.646929	-1105.646929	1	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	408	136	0.1532	0.50802	0.0684	0.4462	0.65661	1	0.78342	1	0.90578	1	NA	NA	NA	""	"SELENOS"	"SELENOS_sequences_filtered_longestORFs_mafft_mincov_prank"	"SELENOS_all"	367	24	"0.207287174753623"	"0.196"	"Y"	"0"	1	"90"	"N"	"0.999999228305"	0	"na"	"N"	"0.986116909613"	0	"na"	"N"	"1"	0	"na"	"N"	"0.692117181689"	0	"na"	"SELENOS_bat_select_mafft_prank"	"SELENOS"	218	8	"0.1693975661318"	"0.172"	"N"	0.8176	5	"71, 72, 85, 128, 173"	"N"	"0.999999579118228"	0	"na"	"N"	"0.389714156459387"	0	"na"	"N"	"0.9970044955034437"	0	"na"	"N"	"0.2133118712228997"	0	"na"	""	""	"shared"
"SEPSECS"	"SEPSECS"	"SEPSECS"	"nsp8"	"SEPSECS"	"list24_COV_list2nonOrf"	"Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase"	"LP|PCH2D|SLA|SLA/LP"	"yes"	24	1506	502	0.23138	0.39192	0.0699	0.3022	0.00014539	0.0027987575	0.00073465	0.0104755648148148	0.00073013	0.0140550025	5.009	3.57509	6	"246_D_0.971,375_M_1.000,383_H_0.956,385_D_0.950,386_E_0.925,456_K_0.990"	"SEPSECS"	"ENSMLUG00000005883.2"	"ENSMLUT00000005885.2"	11	505	92.07920792	0.157833305	0.327	0.84904	0.84915	-3816.572052	-3816.423878	0.862281065	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	1296	432	0.24565	0.28571	0.0539	0.2196	8.3292e-06	0.000458106	4.8623e-05	0.002339981875	4.9379e-05	0.002715845	1.667	8.61509	5	"325_M_1.000,333_H_0.980,345_A_0.902,394_K_0.996,428_Y_0.910"	"SEPSECS"	"SEPSECS_sequences_filtered_longestORFs_mafft_mincov_prank"	"SEPSECS_all"	1204	24	"0.200383584131"	"0.191"	"Y"	"0.0012"	4	"411, 792, 871, 1131"	"Y"	"0.04699410636855563"	1	"871"	"Y"	"0.000675790377354786"	1	"871"	"Y"	"0.022573017543302893"	0	""	"Y"	"0.002544044860029952"	1	"871"	"SEPSECS_sequences_filtered_longestORFs_mafft_prank"	"SEPSECS"	642	12	"0.207760285718"	"0.221"	"Y"	0.0113	0	"na"	"N"	"0.4067707665111908"	0	"na"	"Y"	"0.00326458340100601"	2	"577, 585"	"N"	"0.4269877306527835"	0	"na"	"N"	"0.0707218996108505"	0	"na"	""	""	"shared"
"SIGMAR1"	"SIGMAR1"	"SIGMAR1"	"nsp6"	"SIGMAR1"	"list26_COV_list4dataset2nonOrf"	"sigma non-opioid intracellular receptor 1"	"ALS16|DSMA2|OPRS1|SIG-1R|SR-BP|SR-BP1|SRBP|hSigmaR1|sigma1R"	"no"	24	672	224	0.05548	0.42023	0.0297	0.5354	0.38838	0.874422807017544	0.596	1	0.67815	1	NA	NA	NA	""	"SIGMAR1"	"ENSMLUG00000003061.1"	"ENSMLUT00000003059.1"	9	224	98.66071429	0.085786955	0.2738	0.68602	0.68531	-1513.500222	-1513.071044	0.651044033	NA	NA	NA	""	"SIGMAR1"	"ENSG00000147955.16"	"ENST00000477726.1"	16	193	87.56476684	0.045269245	0.2398	0.42429	0.42002	-1002.547639	-1002.375629	0.841970753	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	429	143	0.0585	0.29391	0.0203	0.3471	1	1	1	1	1	1	NA	NA	NA	""	"SIGMAR1"	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	"SIGMAR1_sequences_filtered_longestORFs_mafft_prank"	"SIGMAR1"	463	11	"0.063555782622"	"0.062"	"N"	1	0	"na"	"N"	"0.9999998523637823"	0	"na"	"Y"	"0.03935837746698778"	3	"28, 43, 296"	"N"	"1.0"	0	"na"	"N"	"0.3163202908753499"	0	"na"	""	""	"onlybats"
"SIL1"	"SIL1"	"SIL1"	"orf8"	"SIL1"	"list23_COV_list1orf"	"SIL1 nucleotide exchange factor"	"BAP|MSS|ULG5"	"no"	24	1386	462	0.15942	0.59934	0.0829	0.52	0.12745	0.434232300884956	1	1	1	1	NA	NA	NA	""	"SIL1"	"ENSMLUG00000005198.2"	"ENSMLUT00000005199.2"	11	385	98.44155844	0.116118369	0.3877	1.00231	1.00231	-3151.512186	-3151.512306	0.999880007	NA	NA	NA	""	"SIL1"	"ENSG00000120725.12"	"ENST00000505353.1"	19	94	90.42553191	0.221006576	0.2776	0.74645	0.74672	-692.585908	-692.585983	0.999925003	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	1059	353	0.20076	0.29004	0.047	0.2343	1	1	1	1	0.57402	1	NA	NA	NA	""	"SIL1"	"SIL1_sequences_filtered_longestORFs_mafft_mincov_prank"	"SIL1_all"	586	24	"0.187714729747"	"0.164"	"N"	"0.5261"	5	"98, 119, 143, 208, 560"	"N"	"0.9999991549406264"	0	"na"	"N"	"0.2610615228717177"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.5210027286033118"	0	"na"	"SIL1_sequences_filtered_longestORFs_mafft_prank"	"SIL1"	670	12	"0.168133221490"	"0.160"	"Y"	0	5	"212, 241, 273, 568, 647"	"N"	"0.8329986992390037"	0	"na"	"N"	"0.10828949711717219"	0	"na"	"N"	"0.3426656803484229"	0	"na"	"N"	"0.05535435177850455"	0	"na"	""	""	"shared"
"SIRT5"	"SIRT5"	"SIRT5"	"nsp14"	"SIRT5"	"list24_COV_list2nonOrf"	"sirtuin 5"	"SIR2L5"	"yes"	24	933	311	0.27368	0.6275	0.1152	0.421	2.9107e-06	0.0001400774375	8.4157e-06	0.000398629	1.6309e-05	0.000697662777777778	1.673	7.58579	4	"22_P_0.989,26_R_0.992,46_F_0.978,303_C_1.000"	"SIRT5"	"ENSMLUG00000014620.2"	"ENSMLUT00000014625.2"	10	311	99.03536977	0.237579341	0.3416	0.9244	0.92967	-2562.976409	-2561.669417	0.270632897	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	675	225	0.3326	0.34329	0.0735	0.221	0.0014798	0.0221197307692308	0.0060589	0.087456875	0.0067793	0.10701306	1.111	11.38468	2	"17_P_0.990,33_F_0.987"	"SIRT5"	"SIRT5_sequences_filtered_longestORFs_mafft_mincov_prank"	"SIRT5_all"	1468	24	"0.258709335100"	"0.258"	"N"	"0.9680"	6	"21, 38, 42, 78, 912, 1095"	"Y"	"0.004669553010602517"	1	"1095"	"Y"	"4.899242027843421e-05"	3	"42, 78, 1095"	"Y"	"0.002159237778258251"	2	"42, 1095"	"Y"	"4.0711497970288204e-05"	3	"42, 78, 1095"	"SIRT5_sequences_filtered_longestORFs_mafft_prank"	"SIRT5"	845	12	"0.237387191711"	"0.279"	"Y"	0.0217	3	"109, 146, 637"	"N"	"0.999997756691088"	0	"na"	"N"	"0.9791150997954938"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.9990004998331715"	0	"na"	""	""	"shared"
"SLC25A21"	"SLC25A21"	"SLC25A21"	"M"	"SLC25A21"	"list26_COV_list4dataset2nonOrf"	"solute carrier family 25 member 21"	"ODC|ODC1"	"yes"	24	900	300	0.36182	0.33146	0.0714	0.1974	0.00044818	0.00639071481481482	0.0020029	0.0233671666666667	0.0021205	0.0313689444444444	2.169	6.95047	2	"66_M_0.999,151_V_0.984"	"SLC25A21"	"ENSMLUG00000011418.2"	"ENSMLUT00000011420.2"	8	241	96.68049793	0.18652784	0.2086	0.43093	0.43097	-1467.466963	-1467.465732	0.998769757	NA	NA	NA	""	"SLC25A21"	"ENSG00000183032.11"	"ENST00000331299.5"	12	300	84	0.201973086	0.052	0.14097	0.14303	-1245.898917	-1244.559684	0.262046581	NA	NA	NA	""	"SLC25A21"	0.023477256	0.440128319	""	NA	NA	NA	""	""	807	269	0.31758	0.21859	0.0441	0.139	0.052178	0.35872375	0.10182	0.7000125	0.1512	1	0.699	7.1217	1	"124_V_0.911"	"SLC25A21"	"SLC25A21_sequences_filtered_longestORFs_mafft_mincov_prank"	"SLC25A21_all"	574	24	"0.292486365788"	"0.285"	"N"	"1.0000"	1	"394"	"Y"	"0.01860047700992424"	1	"194"	"Y"	"0.004167232064733253"	1	"194"	"Y"	"0.016772745526491814"	1	"194"	"Y"	"0.009931934561606084"	1	"194"	"SLC25A21_sequences_filtered_longestORFs_mafft_prank"	"SLC25A21"	547	12	"0.215093302523"	"0.201"	"N"	1	1	"265"	"N"	"0.9999977171495311"	0	"na"	"N"	"0.40225889818633837"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.9694755730760753"	0	"na"	""	""	"shared"
"SLC27A2"	"SLC27A2"	"SLC27A2"	"nsp2"	"SLC27A2"	"list24_COV_list2nonOrf"	"solute carrier family 27 member 2"	"ACSVL1|FACVL1|FATP2|HsT17226|VLACS|VLCS|hFACVL1"	"no"	24	1863	621	0.30326	0.57184	0.1143	0.3768	0.0085308	0.06568716	0.013131	0.0936191666666667	0.02786	0.228214893617021	1.006	4.57613	2	"415_V_0.954,471_H_0.985"	"SLC27A2"	"ENSMLUG00000005760.2"	"ENSMLUT00000005763.2"	8	562	94.66192171	0.238231542	0.38	1.16873	1.19228	-4871.401646	-4860.608444	2.05e-05	-4867.625233	0.000179575	4	"M177, A66, S190, L191"	"SLC27A2"	"ENSG00000140284.10"	"ENST00000544960.1"	11	386	99.22279793	0.273820253	0.1152	0.35661	0.35882	-2334.118749	-2333.392009	0.483482577	NA	NA	NA	""	"SLC27A2"	0.975987433	1	""	NA	NA	NA	""	""	1398	466	0.29917	0.41096	0.0826	0.276	1	1	1	1	1	1	NA	NA	NA	""	"SLC27A2"	"SLC27A2_sequences_filtered_longestORFs_mafft_mincov_prank"	"SLC27A2_all"	699	24	"0.317116282607"	"0.315"	"N"	"0.7063"	12	"83, 99, 105, 305, 393, 413, 449, 471, 527, 529, 637, 680"	"Y"	"0.0018422547501865886"	1	"305"	"Y"	"4.588381649609601e-05"	3	"305, 306, 527"	"Y"	"0.0012633352896771774"	1	"305"	"Y"	"3.120288498361901e-05"	4	"305, 306, 471, 527"	"SLC27A2_sequences_filtered_longestORFs_mafft_prank"	"SLC27A2"	727	12	"0.385009529186"	"0.376"	"Y"	5e-04	23	"26, 31, 40, 53, 79, 125, 196, 217, 247, 249, 250, 262, 281, 460, 471, 476, 499, 503, 567, 600, 610, 685, 699"	"Y"	"0.00037576903711733885"	1	"125"	"Y"	"6.522716428873516e-07"	20	"31, 40, 125, 201, 236, 247, 249, 250, 251, 255, 281, 335, 372, 460, 499, 503, 538, 567, 583, 619"	"Y"	"8.231147755842365e-05"	1	"125"	"Y"	"5.562767025688191e-07"	3	"40, 125, 249"	"yes PS"	""	"shared"
"SLC30A6"	"SLC30A6"	"SLC30A6"	"orf9c"	"SLC30A6"	"list26_COV_list4dataset2nonOrf"	"solute carrier family 30 member 6"	"MST103|MSTP103|ZNT6"	"no"	24	1506	502	0.10083	0.265	0.027	0.2674	0.99887	1	0.99051	1	1	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"SLC30A6"	"ENSG00000152683.14"	"ENST00000440718.5"	17	178	100	0.193019452	0.1015	0.16291	0.17605	-894.734632	-894.148265	0.556344818	NA	NA	NA	""	"SLC30A6"	1	1	""	NA	NA	NA	""	""	1356	452	0.12835	0.21114	0.0261	0.203	1	1	0.99716	1	1	1	NA	NA	NA	""	"SLC30A6"	"SLC30A6_sequences_filtered_longestORFs_mafft_mincov_prank"	"SLC30A6_all"	985	24	"na"	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"SLC30A6_sequences_filtered_longestORFs_mafft_prank"	"SLC30A6"	630	12	"0.095903435060"	"0.098"	"N"	0.5871	1	"137"	"N"	"0.9999993722715014"	0	"na"	"N"	"0.9999999439819491"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.9990004998331715"	0	"na"	""	""	"shared"
"SLC30A7"	"SLC30A7"	"SLC30A7"	"M"	"SLC30A7"	"list26_COV_list4dataset2nonOrf"	"solute carrier family 30 member 7"	"ZNT7|ZnT-7|ZnTL2"	"no"	24	1131	377	0.07294	0.25557	0.0186	0.2553	1	1	1	1	1	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"SLC30A7"	"ENSG00000162695.11"	"ENST00000370111.4"	18	87	90.8045977	0.051964134	0.1617	0.20741	0.20741	-410.970434	-410.970485	0.999949001	NA	NA	NA	""	"SLC30A7"	0.486651162	1	""	NA	NA	NA	""	""	975	325	0.09588	0.1955	0.0184	0.1921	1	1	1	1	1	1	NA	NA	NA	""	"SLC30A7"	"SLC30A7_sequences_filtered_longestORFs_mafft_mincov_prank"	"SLC30A7_all"	545	24	"0.066592670400"	"0.064"	"Y"	"0.0014"	2	"177, 222"	"N"	"0.9999974619068248"	0	"na"	"N"	"0.2984454068419767"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.9980019986669264"	0	"na"	"SLC30A7_sequences_filtered_longestORFs_mafft_prank"	"SLC30A7"	571	11	"0.062338889596"	"0.070"	"N"	0.9806	2	"99, 316"	"N"	"0.9642172717055939"	0	"na"	"Y"	"0.002494839297655659"	1	"467"	"N"	"1.0"	0	"na"	"N"	"0.05276010294187835"	0	"na"	""	""	"shared"
"SLC30A9"	"SLC30A9"	"SLC30A9"	"M"	"SLC30A9"	"list26_COV_list4dataset2nonOrf"	"solute carrier family 30 member 9"	"BILAPES|C4orf1|GAC63|HUEL|ZNT9"	"no"	24	1710	570	0.18206	0.30255	0.045	0.2471	0.83684	1	0.93433	1	0.97891	1	NA	NA	NA	""	"SLC30A9"	"ENSMLUG00000002605.2"	"ENSMLUT00000002607.2"	5	568	95.77464789	0.206334706	0.1818	0.40627	0.41181	-3264.022594	-3262.675495	0.259993409	NA	NA	NA	""	"SLC30A9"	"ENSG00000014824.13"	"ENST00000513699.5"	18	120	83.33333333	0.558165283	0.1582	0.60259	0.60259	-761.801825	-761.801825	1	NA	NA	NA	""	"SLC30A9"	0.036645318	0.559873801	""	NA	NA	NA	""	""	1488	496	0.20868	0.2108	0.0352	0.1685	0.94112	1	0.98931	1	0.99741	1	NA	NA	NA	""	"SLC30A9"	"SLC30A9_sequences_filtered_longestORFs_mafft_mincov_prank"	"SLC30A9_all"	755	24	"0.149571338056"	"0.120"	"N"	"0.3725"	6	"32, 68, 75, 357, 401, 555"	"N"	"0.9999974259705072"	0	"na"	"N"	"0.9999999375395439"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.9970044955027636"	0	"na"	"SLC30A9_sequences_filtered_longestORFs_mafft_prank"	"SLC30A9"	604	12	"0.194459441780"	"0.172"	"Y"	0.0462	3	"73, 119, 406"	"N"	"0.39689306361734966"	0	"na"	"Y"	"0.0002480848189910309"	10	"33, 55, 63, 100, 102, 125, 267, 325, 406, 439"	"N"	"0.053183876599911716"	0	"na"	"Y"	"0.04084380996513176"	1	"406"	""	""	"shared"
"SLC44A2"	"SLC44A2"	"SLC44A2"	"E"	"SLC44A2"	"list24_COV_list2nonOrf"	"solute carrier family 44 member 2"	"CTL2|PP1292"	"no"	24	2127	709	0.05217	0.49832	0.0306	0.586	1	1	0.50379	1	1	1	NA	NA	NA	""	"SLC44A2"	"ENSMLUG00000006644.2"	"ENSMLUT00000006652.2"	14	706	84.70254958	0.094531946	0.3716	1.00538	1.01985	-5241.309467	-5233.432311	0.00037931	-5239.946596	0.000306775	1	"G126"	"SLC44A2"	"ENSG00000129353.14"	"ENST00000586549.1"	18	148	97.97297297	0.020166154	0.1963	0.36902	0.37317	-858.571302	-858.061344	0.6005208	NA	NA	NA	""	"SLC44A2"	0.001390998	0.070168603	""	NA	NA	NA	""	""	1590	530	0.06982	0.29745	0.0231	0.3303	1	1	1	1	1	1	NA	NA	NA	""	"SLC44A2"	"SLC44A2_sequences_filtered_longestORFs_mafft_mincov_prank"	"SLC44A2_all"	1219	24	"na"	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"SLC44A2_sequences_filtered_longestORFs_mafft_prank"	"SLC44A2"	1264	12	"0.114209694102"	"0.110"	"Y"	0	8	"308, 312, 377, 579, 581, 585, 972, 982"	"Y"	"4.816663466237386e-45"	3	"972, 982, 984"	"Y"	"3.1935157674114988e-59"	3	"972, 982, 984"	"Y"	"4.758968983193939e-65"	3	"308, 972, 982"	"Y"	"5.018372006645229e-60"	3	"308, 972, 982"	"Would consider the FL instead of recomb. PS yes"	""	"shared"
"SLC9A3R1"	"SLC9A3R1"	"SLC9A3R1"	"orf9b"	"SLC9A3R1"	"list25_COV_list3dataset2orf"	"SLC9A3 regulator 1"	"EBP50|NHERF|NHERF-1|NHERF1|NPHLOP2"	"no"	23	1077	359	0.09675	0.48167	0.0594	0.6134	0.55212	1	0.24235	0.657075704225352	0.8662	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"SLC9A3R1"	1	1	""	NA	NA	NA	""	""	675	225	0.09107	0.23244	0.0252	0.2771	0.95163	1	1	1	1	1	NA	NA	NA	""	"SLC9A3R1"	"SLC9A3R1_sequences_filtered_longestORFs_mafft_mincov_prank"	"SLC9A3R1_all"	448	23	"0.178234732419"	"0.101"	"N"	"0.7234"	4	"64, 181, 191, 365"	"N"	"0.9999993284375231"	0	"na"	"N"	"0.9972514474835665"	0	"na"	"N"	"1.0"	0	"na"	"N"	"1.0"	0	"na"	"SLC9A3R1_sequences_filtered_longestORFs_mafft_prank"	"SLC9A3R1"	374	12	"0.130757231892"	"0.099"	"Y"	0	6	"119, 135, 136, 181, 282, 374"	"N"	"0.9999993029603202"	0	"na"	"Y"	"0.010308287959785774"	1	"282"	"N"	"1.0"	0	"na"	"Y"	"0.004566537590817452"	1	"282"	""	""	"shared"
"SLU7"	"SLU7"	"SLU7"	"nsp12"	"SLU7"	"list24_COV_list2nonOrf"	"SLU7 homolog, splicing factor"	"9G8|hSlu7"	"no"	24	1770	590	0.06299	0.26477	0.0183	0.2913	0.16871	0.5227068	0.14566	0.471252941176471	0.42115	1	NA	NA	NA	""	"SLU7"	"ENSMLUG00000003091.2"	"ENSMLUT00000003095.2"	8	587	93.6967632	0.052285107	0.3882	0.72181	0.72909	-3777.489826	-3775.221268	0.103461264	NA	NA	NA	""	"SLU7"	"ENSG00000164609.9"	"ENST00000520664.1"	19	101	100	0.026989183	0.148	0.28531	0.28252	-552.051744	-550.971531	0.3395232	NA	NA	NA	""	"SLU7"	0.98511652	1	""	NA	NA	NA	""	""	1587	529	0.08503	0.19183	0.0159	0.1867	0.054259	0.3601675	0.10063	0.7000125	0.15738	1	0.87	4.90547	1	"498_I_0.966"	"SLU7"	"SLU7_sequences_filtered_longestORFs_mafft_mincov_prank"	"SLU7_all"	658	24	"0.078443951323"	"0.069"	"N"	"0.9364"	2	"393, 576"	"N"	"0.4957027238701016"	0	"na"	"Y"	"1.6099547138282536e-05"	2	"66, 626"	"N"	"0.056812437906525494"	0	"na"	"Y"	"0.0008884785966213045"	2	"66, 626"	"SLU7_sequences_filtered_longestORFs_mafft_prank"	"SLU7"	629	12	"0.085159487610"	"0.073"	"N"	1	1	"136"	"N"	"0.9999985890654847"	0	"na"	"Y"	"5.791404197879968e-07"	23	"45, 61, 136, 140, 144, 158, 188, 196, 201, 491, 493, 505, 511, 513, 515, 516, 521, 530, 538, 564, 587, 597, 600"	"N"	"1.0"	0	"na"	"N"	"0.7046880897184571"	0	"na"	""	""	"shared"
"SMOC1"	"SMOC1"	"SMOC1"	"orf8"	"SMOC1"	"list25_COV_list3dataset2orf"	"SPARC related modular calcium binding 1"	"OAS"	"no"	22	1308	436	0.0953	0.42631	0.0405	0.4253	1	1	0.9833	1	1	1	NA	NA	NA	""	"SMOC1"	"ENSMLUG00000011966.2"	"ENSMLUT00000011968.2"	10	421	98.09976247	0.042088961	0.2562	0.50629	0.50745	-2637.844924	-2637.807862	0.963616389	NA	NA	NA	""	"SMOC1"	"ENSG00000198732.10"	"ENST00000381280.4"	17	435	98.62068966	0.093384735	0.1563	0.40881	0.40871	-2715.53357	-2715.532979	0.999409175	NA	NA	NA	""	"SMOC1"	1	1	""	NA	NA	NA	""	""	1011	337	0.10432	0.25769	0.0273	0.2617	0.77188	1	0.92916	1	0.95673	1	NA	NA	NA	""	"SMOC1"	"SMOC1_sequences_filtered_longestORFs_mafft_mincov_prank"	"SMOC1_all"	1158	24	"0.098002371610"	"0.087"	"Y"	"0.0000"	2	"150, 1135"	"N"	"0.7558380802197857"	0	"na"	"Y"	"0.00012900450325755493"	5	"148, 150, 340, 753, 989"	"N"	"0.8411376148448129"	0	"na"	"N"	"0.06815300690157228"	0	"na"	"SMOC1_sequences_filtered_longestORFs_mafft_prank"	"SMOC1"	700	12	"0.053224388859"	"0.055"	"N"	1	0	"na"	"N"	"0.9999999988494892"	0	"na"	"N"	"0.12892934950160578"	0	"na"	"N"	"0.9801986733063274"	0	"na"	"N"	"0.522045776761206"	0	"na"	""	""	"shared"
"SNIP1"	"SNIP1"	"SNIP1"	"N"	"SNIP1"	"list26_COV_list4dataset2nonOrf"	"Smad nuclear interacting protein 1"	"PML1|PMRED"	"no"	24	1194	398	0.16858	0.42404	0.0573	0.3397	0.045868	0.215355853658537	0.089309	0.337097696078431	0.13727	0.694036538461539	3.401	3.00912	4	"57_T_0.938,61_G_0.922,153_T_0.951,221_A_0.938"	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"SNIP1"	"ENSG00000163877.10"	"ENST00000468040.2"	8	69	84.05797101	0.432387306	1.736	57.02687	47.24559	-750.072181	-749.727467	0.708422933	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	849	283	0.13566	0.21434	0.0284	0.209	0.32741	1	0.56139	1	0.64496	1	NA	NA	NA	""	"SNIP1"	"SNIP1_sequences_filtered_longestORFs_mafft_mincov_prank"	"SNIP1_all"	638	24	"0.173217897527"	"0.170"	"N"	"0.9336"	9	"158, 193, 374, 383, 416, 423, 444, 462, 606"	"N"	"0.999997989455753"	0	"na"	"N"	"0.9999105327517296"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.9579113900673513"	0	"na"	"SNIP1_sequences_filtered_longestORFs_mafft_prank"	"SNIP1"	430	12	"0.120126641213"	"0.118"	"N"	0.6703	1	"167"	"N"	"0.9999999406377373"	0	"na"	"N"	"0.5714013295616718"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.489681548585542"	0	"na"	""	""	"shared"
"SPART"	"SPART"	"SPG20"	"nsp9"	"SPG20"	"list24_COV_list2nonOrf"	"spartin"	"SPG20|TAHCCP1"	"no"	24	2001	667	0.10045	0.46066	0.0459	0.4567	0.21719	0.601569424460432	0.23827	0.650595390070922	0.56517	1	NA	NA	NA	""	"SPART"	"ENSMLUG00000012067.2"	"ENSMLUT00000012066.2"	10	625	95.04	0.141161772	1.9595	1.80094	1.81677	-5615.301761	-5613.401915	0.149591655	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"SPG20"	1	1	""	NA	NA	NA	""	""	1722	574	0.14587	0.31945	0.0431	0.2957	0.10234	0.547234722222222	0.16323	0.910776086956522	0.25922	1	NA	NA	NA	""	"SPART"	"SPART_sequences_filtered_longestORFs_mafft_mincov_prank"	"SPART_all"	704	24	"0.127242185779"	"0.129"	"N"	"1.0000"	4	"161, 203, 373, 395"	"N"	"0.999997824901221"	0	"na"	"N"	"0.770163666199085"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.44574867266496354"	0	"na"	"SPART_sequences_filtered_longestORFs_mafft_prank"	"SPART"	817	12	"0.134754866524"	"0.134"	"N"	0.5048	9	"2, 66, 167, 363, 383, 599, 664, 728, 767"	"N"	"0.9999987601675867"	0	"na"	"Y"	"0.0042226296605877315"	4	"122, 383, 728, 767"	"N"	"1.0"	0	"na"	"N"	"0.9930244429327221"	0	"na"	""	""	"shared"
"SRP19"	"SRP19"	"SRP19"	"nsp8"	"SRP19"	"list24_COV_list2nonOrf"	"signal recognition particle 19"	"-"	"no"	24	435	145	0.07161	0.21106	0.018	0.251	0.85759	1	0.97637	1	0.98377	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"SRP19"	1	1	""	NA	NA	NA	""	""	381	127	0.14093	0.09824	0.0137	0.0975	1	1	1	1	0.99998	1	NA	NA	NA	""	"SRP19"	"SRP19_sequences_filtered_longestORFs_mafft_mincov_prank"	"SRP19_all"	997	24	"0.246470105804"	"0.356"	"Y"	"0.0000"	9	"219, 232, 433, 435, 452, 490, 493, 498, 557"	"N"	"0.9999993984813036"	0	"na"	"N"	"0.8240632557492455"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.20351816809027615"	0	"na"	"SRP19_sequences_filtered_longestORFs_mafft_prank"	"SRP19"	382	11	"0.304060283095"	"0.309"	"N"	1	4	"128, 133, 235, 312"	"N"	"0.9999993469480019"	0	"na"	"N"	"0.7188032909860891"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.6262535236576515"	0	"na"	""	""	"shared"
"SRP54"	"SRP54"	"SRP54"	"nsp8"	"SRP54"	"list24_COV_list2nonOrf"	"signal recognition particle 54"	"-"	"no"	24	1515	505	1e-04	0.1979	0	0.2624	1	1	1	1	0.99785	1	NA	NA	NA	""	"SRP54"	"ENSMLUG00000008958.2"	"ENSMLUT00000008994.2"	10	505	60.59405941	0.017058519	0.2085	50.34695	50.34695	-2571.565569	-2571.566848	0.998721818	NA	NA	NA	""	"SRP54"	"ENSG00000100883.11"	"ENST00000630962.1"	18	54	94.44444444	0.176513031	0.2524	0.88567	1.07571	-330.698886	-327.498447	0.040744313	-330.479792	0.014611731	3	"L32, C36, T37"	"SRP54"	0.995212721	1	""	NA	NA	NA	""	""	1395	465	1e-04	0.11791	0	0.1664	1	1	1	1	0.99856	1	NA	NA	NA	""	"SRP54"	"SRP54_sequences_filtered_longestORFs_mafft_mincov_prank"	"SRP54_all"	734	24	"0.004569972829"	"0.004"	"N"	"0.4180"	0	"na"	"N"	"0.9999999999345164"	0	"na"	"N"	"0.9999985695186524"	0	"na"	"N"	"0.9990004998331715"	0	"na"	"N"	"0.9801986733067731"	0	"na"	"SRP54_sequences_filtered_longestORFs_mafft_prank"	"SRP54"	514	12	"0.001692026331"	"0.002"	"N"	1	0	"na"	"N"	"0.9999999921756171"	0	"na"	"N"	"0.999999957015917"	0	"na"	"N"	"0.9990004998336257"	0	"na"	"N"	"0.9990004998331715"	0	"na"	""	""	"shared"
"SRP72"	"SRP72"	"SRP72"	"nsp8"	"SRP72"	"list24_COV_list2nonOrf"	"signal recognition particle 72"	"BMFF|BMFS1|HEL103"	"no"	24	2016	672	0.10809	0.29053	0.0293	0.2714	1	1	1	1	0.99947	1	NA	NA	NA	""	"SRP72"	"ENSMLUG00000007344.2"	"ENSMLUT00000007361.2"	11	676	97.18934911	0.050821197	0.2715	0.50612	0.50653	-4309.948669	-4308.540031	0.244476033	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"SRP72"	0.622236978	1	""	NA	NA	NA	""	""	1767	589	0.11538	0.20629	0.0229	0.1988	1	1	1	1	0.99971	1	NA	NA	NA	""	"SRP72"	"SRP72_sequences_filtered_longestORFs_mafft_mincov_prank"	"SRP72_all"	1139	23	"0.106194110530"	"0.113"	"Y"	"0.0000"	2	"771, 885"	"N"	"0.9623151432908147"	0	"na"	"N"	"0.096522337886414"	0	"na"	"N"	"0.18768317070702073"	0	"na"	"na"	"na"	0	"na"	"SRP72_sequences_filtered_longestORFs_mafft_prank"	"SRP72"	710	12	"0.068652587280"	"0.067"	"N"	0.9841	0	"na"	"N"	"0.6279854210644857"	0	"na"	"Y"	"5.701113701438703e-05"	5	"225, 394, 477, 569, 658"	"N"	"0.4529380127763897"	0	"na"	"N"	"0.051560469245106696"	0	"na"	""	""	"shared"
"STC2"	"STC2"	"STC2"	"orf8"	"STC2"	"list23_COV_list1orf"	"stanniocalcin 2"	"STC-2|STCRP"	"no"	23	909	303	0.17486	0.54238	0.0883	0.505	1	1	1	1	1	1	NA	NA	NA	""	"STC2"	"ENSMLUG00000016389.2"	"ENSMLUT00000016385.2"	10	303	98.67986799	0.204277098	0.585	1.68281	1.69703	-3126.652494	-3126.533313	0.887647122	NA	NA	NA	""	"STC2"	"ENSG00000113739.10"	"ENST00000518455.1"	19	53	100	0.174638631	0.1251	0.21928	0.21954	-271.119848	-270.942741	0.837690147	NA	NA	NA	""	"STC2"	0.650541589	1	""	NA	NA	NA	""	""	624	208	0.2661	0.35986	0.0757	0.2844	1	1	0.99992	1	1	1	NA	NA	NA	""	"STC2"	"STC2_sequences_filtered_longestORFs_mafft_mincov_prank"	"STC2_all"	317	24	"0.163241047367"	"0.131"	"N"	"1.0000"	0	"na"	"N"	"0.9999976125915359"	0	"na"	"N"	"0.9998393244630842"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.9990004998331715"	0	"na"	"STC2_sequences_filtered_longestORFs_mafft_prank"	"STC2"	464	11	"0.136088221159"	"0.132"	"N"	1	3	"383, 396, 402"	"N"	"0.9999998138109905"	0	"na"	"N"	"0.9999950043472564"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.9920319148367972"	0	"na"	""	""	"shared"
"STOM"	"STOM"	"STOM"	"M"	"STOM"	"list26_COV_list4dataset2nonOrf"	"stomatin"	"BND7|EPB7|EPB72"	"no"	24	867	289	0.16126	0.34963	0.0454	0.2814	0.011191	0.0812931132075472	0.034571	0.179862635135135	0.036725	0.27517875	0.656	8.03423	2	"8_A_0.993,268_V_0.930"	"STOM"	"ENSMLUG00000000077.2"	"ENSMLUT00000000077.2"	15	280	85	0.143064561	0.5232	1.77166	1.77816	-2767.552917	-2752.97994	4.69e-07	-2759.929493	0.00019289	4	"I19, S12, S166, D14"	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"STOM"	0.049087394	0.653548123	""	NA	NA	NA	""	""	711	237	0.19334	0.203	0.0305	0.1579	0.28055	1	0.44112	1	0.55867	1	NA	NA	NA	""	"STOM"	"STOM_sequences_filtered_longestORFs_mafft_mincov_prank_part1_prank"	"STOM_all_part1"	600	24	"0.215952729448"	"0.216"	"Y"	"0.0000"	6	"26, 31, 122, 363, 365, 534"	"N"	"0.2333523733982205"	0	"na"	"Y"	"0.006072382696255782"	2	"26, 93"	"N"	"0.15107180883632135"	0	"na"	"Y"	"0.0034790361219914244"	2	"26, 93"	"STOM_sequences_filtered_longestORFs_mafft_prank"	"STOM"	311	12	"0.174826037559"	"0.182"	"N"	0.1021	5	"8, 15, 48, 55, 70"	"N"	"0.6102022672127836"	0	"na"	"Y"	"7.793291706831177e-06"	10	"7, 8, 17, 47, 50, 62, 70, 83, 202, 311"	"N"	"0.657704195267903"	0	"na"	"N"	"0.06959935353327155"	0	"na"	""	""	"shared"
"STOML2"	"STOML2"	"STOML2"	"orf3b"	"STOML2"	"list23_COV_list1orf"	"stomatin like 2"	"HSPC108|SLP-2"	"no"	22	1071	357	0.09191	0.34197	0.0287	0.3118	1	1	1	1	1	1	NA	NA	NA	""	"STOML2"	"ENSMLUG00000006166.2"	"ENSMLUT00000006174.2"	12	357	99.15966387	0.068343149	0.3235	0.75741	0.75764	-2702.938036	-2702.932391	0.994370903	NA	NA	NA	""	"STOML2"	"ENSG00000165283.15"	"ENST00000619795.4"	18	311	99.03536977	0.075839176	0.1482	0.26471	0.26471	-1729.466179	-1729.466189	0.99999	NA	NA	NA	""	"STOML2"	0.998045592	1	""	NA	NA	NA	""	""	807	269	0.18347	0.20681	0.0295	0.1606	1	1	1	1	1	1	NA	NA	NA	""	"STOML2"	"STOML2_sequences_filtered_longestORFs_mafft_mincov_prank"	"STOML2_all"	628	24	"0.103458535556"	"0.101"	"N"	"1.0000"	1	"318"	"N"	"0.9999990309684256"	0	"na"	"N"	"0.3767316233019632"	0	"na"	"N"	"0.9464851479532084"	0	"na"	"N"	"0.3109882962958908"	0	"na"	"STOML2_sequences_filtered_longestORFs_mafft_prank"	"STOML2"	356	12	"0.071134004860"	"0.074"	"N"	0.998	1	"21"	"N"	"0.9999989277008645"	0	"na"	"N"	"0.11249452518709809"	0	"na"	"N"	"1.0"	0	"na"	"N"	"1.0"	0	"na"	""	""	"shared"
"SUN2"	"SUN2"	"SUN2"	"orf3a"	"SUN2"	"list25_COV_list3dataset2orf"	"Sad1 and UNC84 domain containing 2"	"UNC84B"	"no"	24	2241	747	0.13437	0.69299	0.0913	0.6793	1	1	1	1	1	1	NA	NA	NA	""	"SUN2"	"ENSMLUG00000003774.2"	"ENSMLUT00000003780.2"	10	756	93.12169312	0.211219405	0.3524	1.34381	1.36231	-6792.477488	-6791.727373	0.472312234	NA	NA	NA	""	"SUN2"	"ENSG00000100242.15"	"ENST00000405510.5"	17	718	95.68245125	0.13547888	0.2157	0.53883	0.53883	-4701.790563	-4701.790571	0.999992	NA	NA	NA	""	"SUN2"	1	1	""	NA	NA	NA	""	""	1560	520	0.15132	0.27627	0.0417	0.2753	0.94003	1	0.99049	1	1	1	NA	NA	NA	""	"SUN2"	"SUN2_sequences_filtered_longestORFs_mafft_mincov_prank"	"SUN2_all"	1705	24	"0.152096786573"	"0.130"	"N"	"0.9854"	14	"784, 1149, 1155, 1166, 1296, 1298, 1310, 1332, 1358, 1363, 1405, 1579, 1594, 1602"	"N"	"0.9999996579918519"	0	"na"	"N"	"0.14204123141551406"	0	"na"	"N"	"0.9990004998331715"	0	"na"	"N"	"0.25233442195527483"	0	"na"	"SUN2_sequences_filtered_longestORFs_mafft_prank"	"SUN2"	950	12	"0.130189836997"	"0.120"	"Y"	0.0148	10	"171, 178, 228, 296, 297, 491, 546, 569, 613, 757"	"N"	"0.9999999386345754"	0	"na"	"N"	"0.10281740478528173"	0	"na"	"N"	"0.6900439415580961"	0	"na"	"Y"	"0.020241911445811743"	0	""	"Quite variable "	""	"shared"
"TAPT1"	"TAPT1"	"TAPT1"	"orf9c"	"TAPT1"	"list24_COV_list2nonOrf"	"transmembrane anterior posterior transformation 1"	"CMVFR|OCLSBG"	"no"	24	1704	568	0.1727	0.3442	0.048	0.278	0.21717	0.601569424460432	0.35473	0.812922916666667	0.46634	1	NA	NA	NA	""	"TAPT1"	"ENSMLUG00000009395.2"	"ENSMLUT00000009399.2"	10	501	98.20359281	0.039818834	0.5346	0.97227	0.97318	-3846.27272	-3845.726577	0.579179403	NA	NA	NA	""	"TAPT1"	"ENSG00000169762.16"	"ENST00000513833.1"	19	51	94.11764706	0.050566703	0.0519	0.12196	0.20008	-225.402719	-221.92609	0.030911438	-225.388139	0.008504187	NA	""	"TAPT1"	1	1	""	NA	NA	NA	""	""	1419	473	0.11404	0.22831	0.0235	0.2063	1	1	1	1	1	1	NA	NA	NA	""	"TAPT1"	"TAPT1_sequences_filtered_longestORFs_mafft_mincov_prank"	"TAPT1_all"	1355	24	"0.059510938125"	"0.135"	"Y"	"0.0453"	2	"410, 414"	"N"	"0.9999992852647491"	0	"na"	"Y"	"1.311118094882085e-05"	8	"1097, 1240, 1241, 1245, 1259, 1263, 1273, 1276"	"N"	"0.8017166802898278"	0	"na"	"N"	"0.39455371037148623"	0	"na"	"TAPT1_sequences_filtered_longestORFs_mafft_prank"	"TAPT1"	847	12	"0.053518355661"	"0.077"	"N"	1	1	"101"	"N"	"0.9999999048982363"	0	"na"	"Y"	"0.0022989368127261907"	2	"684, 795"	"N"	"1.0"	0	"na"	"N"	"0.7032801219764382"	0	"na"	""	""	"shared"
"TARS2"	"TARS2"	"TARS2"	"M"	"TARS2"	"list26_COV_list4dataset2nonOrf"	"threonyl-tRNA synthetase 2, mitochondrial"	"COXPD21|TARSL1|thrRS"	"no"	24	2160	720	0.30484	0.52026	0.0988	0.3242	0.034329	0.171645	0.078453	0.305647222222222	0.13216	0.686583333333333	1.215	4.31287	2	"173_I_0.958,638_R_0.901"	"TARS2"	"ENSMLUG00000013123.2"	"ENSMLUT00000013127.2"	4	722	99.58448753	0.129341991	0.2712	0.32527	0.32527	-3826.701492	-3826.701494	0.999998	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"TARS2"	1	1	""	NA	NA	NA	""	""	1644	548	0.31786	0.29867	0.058	0.1825	0.8519	1	0.94738	1	0.98258	1	NA	NA	NA	""	"TARS2"	"TARS2_sequences_filtered_longestORFs_mafft_mincov_prank"	"TARS2_all"	1199	22	"0.256722988523"	"0.272"	"Y"	"0.0003"	15	"231, 319, 459, 469, 509, 556, 623, 680, 727, 929, 930, 973, 1020, 1026, 1124"	"N"	"0.9999989787471107"	0	"na"	"N"	"0.6227803328213158"	0	"na"	"N"	"0.9940179640527202"	0	"na"	"N"	"0.5521144043074049"	0	"na"	"TARS2_bat_same_mafft_prank"	"TARS2"	1893	11	"0.134537221746324"	"0.164"	"N"	1	6	"121, 571, 1151, 1732, 1832, 1833"	"N"	"0.999998829519203"	0	"na"	"N"	"0.999999998618478"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.4479829971847956"	0	"na"	""	""	"shared"
"TBCA"	"TBCA"	"TBCA"	"nsp11"	"TBCA"	"list26_COV_list4dataset2nonOrf"	"tubulin folding cofactor A"	"-"	"no"	24	327	109	0.25534	0.36767	0.0685	0.2681	1	1	1	1	1	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	264	88	0.22215	0.28046	0.048	0.2161	1	1	1	1	1	1	NA	NA	NA	""	"TBCA"	"TBCA_sequences_filtered_longestORFs_mafft_mincov_prank"	"TBCA_all"	508	24	"0.337281001315"	"0.401"	"Y"	"0.0001"	5	"6, 49, 232, 242, 448"	"N"	"0.9547514305065781"	0	"na"	"N"	"0.3724648352353087"	0	"na"	"N"	"0.2546156820248195"	0	"na"	"N"	"0.08874395194919735"	0	"na"	"TBCA_bat_same_mafft_prank"	"TBCA"	190	12	"0.137521294837412"	"0.242"	"Y"	0	1	"112"	"N"	"0.99999970048434"	0	"na"	"N"	"0.993597058314342"	0	"na"	"Y"	"5.8900579536612135e-09"	3	"2, 3, 4"	"na"	"na"	0	"na"	""	""	"shared"
"TBK1"	"TBK1"	"TBK1"	"nsp13"	"TBK1"	"list26_COV_list4dataset2nonOrf"	"TANK binding kinase 1"	"FTDALS4|IIAE8|NAK|T2K"	"no"	24	2190	730	0.09206	0.30576	0.0308	0.3344	0.2918	0.706559748427673	0.45169	0.961245027624309	0.68512	1	NA	NA	NA	""	"TBK1"	"ENSMLUG00000009717.2"	"ENSMLUT00000009747.2"	11	730	99.31506849	0.132077656	0.2028	0.56124	0.56429	-4901.954784	-4900.946517	0.364850718	NA	NA	NA	""	"TBK1"	"ENSG00000183735.9"	"ENST00000539810.1"	18	48	100	NA	0.198	0.1811	0.1811	-221.309111	-221.309323	0.999788022	NA	NA	NA	""	"TBK1"	1	1	""	NA	NA	NA	""	""	1941	647	0.09834	0.20818	0.0224	0.2276	0.11095	0.562049342105263	0.21216	1	0.3253	1	NA	NA	NA	""	"TBK1"	"TBK1_sequences_filtered_longestORFs_mafft_mincov_prank"	"TBK1_all"	1010	24	"0.071557832345"	"0.054"	"Y"	"0.0000"	6	"589, 599, 637, 697, 702, 735"	"N"	"0.9998866560273815"	0	"na"	"Y"	"0.0074795279294670725"	1	"441"	"N"	"1.0"	0	"na"	"N"	"0.2644772612998432"	0	"na"	"TBK1_sequences_filtered_longestORFs_mafft_prank"	"TBK1"	760	12	"0.160775310865"	"0.123"	"Y"	0	4	"283, 289, 635, 682"	"Y"	"0.01649150184328647"	1	"19"	"Y"	"1.5887590517440409e-06"	3	"19, 283, 406"	"Y"	"0.035154593024559"	0	""	"Y"	"1.450771742364061e-07"	3	"19, 283, 406"	"ok for PS. First site only due to alternative start site (splicing)"	""	"shared"
"TBKBP1"	"TBKBP1"	"TBKBP1"	"nsp13"	"TBKBP1"	"list26_COV_list4dataset2nonOrf"	"TBK1 binding protein 1"	"ProSAPiP2|SINTBAD"	"no"	24	1851	617	0.06496	0.63331	0.0555	0.855	1	1	0.99446	1	1	1	NA	NA	NA	""	"TBKBP1"	"ENSMLUG00000014537.2"	"ENSMLUT00000014538.2"	8	385	93.76623377	0.087125125	0.4561	0.86161	0.86161	-2663.440804	-2663.440799	0.999995	NA	NA	NA	""	"TBKBP1"	"ENSG00000198933.9"	"ENST00000622396.1"	14	223	98.65470852	0.126745863	0.1225	0.21815	0.21824	-1170.30195	-1170.296198	0.994264511	NA	NA	NA	""	"TBKBP1"	0.544718639	1	""	NA	NA	NA	""	""	1167	389	0.06461	0.26627	0.0229	0.3542	0.87415	1	0.98754	1	1	1	NA	NA	NA	""	"TBKBP1"	"TBKBP1_sequences_filtered_longestORFs_mafft_mincov_prank"	"TBKBP1_all"	1961	21	"0.085497667869"	"0.061"	"Y"	"0.0000"	7	"210, 1584, 1586, 1592, 1640, 1643, 1932"	"N"	"0.9999992271617233"	0	"na"	"Y"	"0.007205789252335191"	4	"58, 1586, 1643, 1647"	"N"	"0.0626620047421258"	0	"na"	"N"	"0.05698313113194283"	0	"na"	"TBKBP1_sequences_filtered_longestORFs_mafft_prank"	"TBKBP1"	787	12	"0.050225800517"	"0.055"	"N"	0.9686	0	"na"	"N"	"0.9999998864691471"	0	"na"	"N"	"0.9313942790654101"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.9970044955027636"	0	"na"	""	""	"shared"
"TCF12"	"TCF12"	"TCF12"	"nsp12"	"TCF12"	"list26_COV_list4dataset2nonOrf"	"transcription factor 12"	"CRS3|HEB|HTF4|HsT17266|TCF-12|bHLHb20|p64"	"no"	23	2121	707	0.09329	0.23129	0.0205	0.2194	1	1	1	1	1	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"TCF12"	"ENSG00000140262.17"	"ENST00000560948.1"	19	44	93.18181818	0.195051608	0.0652	50.1049	50.10237	-293.114675	-291.985703	0.323365505	NA	NA	NA	""	"TCF12"	0.867226426	1	""	NA	NA	NA	""	""	1911	637	0.1229	0.17108	0.0194	0.1579	1	1	0.99581	1	1	1	NA	NA	NA	""	"TCF12"	"TCF12_sequences_filtered_longestORFs_mafft_mincov_prank"	"TCF12_all"	1784	23	"0.089163951675"	"0.087"	"N"	"1.0000"	1	"1456"	"N"	"0.5717787679723109"	0	"na"	"Y"	"0.0005495687132345552"	2	"939, 1456"	"N"	"0.35879646540608207"	0	"na"	"na"	"na"	0	"na"	"TCF12_sequences_filtered_longestORFs_mafft_prank"	"TCF12"	1743	12	"0.090814965700"	"0.085"	"N"	0.1396	4	"1526, 1611, 1689, 1690"	"N"	"0.999997598744967"	0	"na"	"N"	"0.08447404722561117"	0	"na"	"N"	"1.0"	0	"na"	"N"	"1.0"	0	"na"	""	""	"shared"
"THTPA"	"THTPA"	"THTPA"	"orf10"	"THTPA"	"list25_COV_list3dataset2orf"	"thiamine triphosphatase"	"THTP|THTPASE"	"no"	24	693	231	0.40061	0.60108	0.1372	0.3424	1	1	1	1	1	1	NA	NA	NA	""	"THTPA"	"ENSMLUG00000016741.2"	"ENSMLUT00000016739.2"	15	231	98.7012987	0.307948843	0.3508	1.57567	1.57684	-2692.924316	-2692.665785	0.772185093	NA	NA	NA	""	"THTPA"	"ENSG00000259431.5"	"ENST00000556545.1"	19	60	95	0.332747784	0.2145	0.75211	0.74901	-446.76741	-446.742424	0.975323566	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	570	190	0.46354	0.38389	0.0937	0.202	0.37349	1	0.64589	1	0.68145	1	NA	NA	NA	""	"THTPA"	"THTPA_sequences_filtered_longestORFs_mafft_mincov_prank"	"THTPA_all"	373	24	"0.443083285519"	"0.477"	"N"	"0.1223"	4	"163, 210, 292, 342"	"N"	"0.9766896697822607"	0	"na"	"N"	"0.9686115036684789"	0	"na"	"N"	"0.4533911773339794"	0	"na"	"N"	"0.2813938470598014"	0	"na"	"THTPA_sequences_filtered_longestORFs_mafft_prank"	"THTPA"	279	12	"0.399843538338"	"0.416"	"N"	1	4	"64, 66, 129, 276"	"N"	"0.9999959784148735"	0	"na"	"N"	"0.9987236270706843"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.9870841350203666"	0	"na"	""	""	"shared"
"TIMM10"	"TIMM10"	"TIMM10"	"nsp4"	"TIMM10"	"list24_COV_list2nonOrf"	"translocase of inner mitochondrial membrane 10"	"TIM10|TIM10A|TIMM10A"	"no"	24	273	91	1e-04	0.21377	0	0.3674	1	1	1	1	0.9995	1	NA	NA	NA	""	"TIMM10"	"ENSMLUG00000007883.1"	"ENSMLUT00000007868.1"	15	91	96.7032967	0.014279045	0.3297	0.54196	0.54197	-562.40929	-562.409426	0.999864009	NA	NA	NA	""	"TIMM10"	"ENSG00000134809.8"	"ENST00000525158.1"	19	91	96.7032967	0.341568474	0.1794	0.51918	0.53555	-583.570719	-583.285201	0.751624812	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	231	77	1e-04	0.04889	0	0.1466	1	1	1	1	0.99976	1	NA	NA	NA	""	"TIMM10"	"TIMM10_sequences_filtered_longestORFs_mafft_mincov_prank"	"TIMM10_all"	155	24	"0.144848899100"	"0.092"	"N"	"0.8126"	0	"na"	"N"	"0.9999990566677655"	0	"na"	"N"	"0.9999284525655219"	0	"na"	"N"	"0.1148647419259746"	0	"na"	"N"	"0.6596802704842788"	0	"na"	"TIMM10_sequences_filtered_longestORFs_mafft_prank"	"TIMM10"	156	12	"0.025368776757"	"0.022"	"N"	1	0	"na"	"N"	"0.9999980569046563"	0	"na"	"N"	"0.999396690041851"	0	"na"	"Y"	"0.0017963472167066177"	0	""	"N"	"1.0"	0	"na"	""	""	"shared"
"TIMM10B"	"TIMM10B"	"TIMM10B"	"nsp4"	"TIMM10B"	"list24_COV_list2nonOrf"	"translocase of inner mitochondrial membrane 10B"	"FXC1|TIM10B|Tim9b"	"no"	24	318	106	0.18622	0.25396	0.04	0.2149	1	1	0.98893	1	1	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"TIMM10B"	0.993324497	1	""	NA	NA	NA	""	""	243	81	0.13293	0.21534	0.0283	0.2132	1	1	1	1	1	1	NA	NA	NA	""	"TIMM10B"	"TIMM10B_sequences_filtered_longestORFs_mafft_mincov_prank_part1_prank"	"TIMM10B_all_part1"	247	24	"0.256599587009"	"0.177"	"N"	"0.8037"	1	"117"	"N"	"0.8704886074406261"	0	"na"	"N"	"0.6434962756108793"	0	"na"	"N"	"0.9920319148370227"	0	"na"	"N"	"0.38558253897972294"	0	"na"	"TIMM10B_sequences_filtered_longestORFs_mafft_prank"	"TIMM10B"	217	12	"0.203079808533"	"0.260"	"N"	1	3	"14, 67, 164"	"N"	"0.9999997065308865"	0	"na"	"N"	"0.9610584460379168"	0	"na"	"N"	"0.9493288668429777"	0	"na"	"N"	"0.3961350858554927"	0	"na"	""	""	"shared"
"TIMM29"	"TIMM29"	"C19orf52"	"nsp4"	"C19orf52"	"list24_COV_list2nonOrf"	"translocase of inner mitochondrial membrane 29"	"C19orf52|TIM29 "	"no"	20	783	261	0.09802	0.57547	0.0767	0.7829	0.025969	0.1483075	0.048206	0.220944166666667	0.22976	0.972061538461538	1.492	5.48993	2	"20_A_0.923,21_V_0.908"	"TIMM29"	"ENSMLUG00000011121.2"	"ENSMLUT00000011135.2"	7	228	93.85964912	0.123761455	0.5815	1.05185	1.06124	-1672.344087	-1671.95654	0.678719734	NA	NA	NA	""	"TIMM29"	"ENSG00000142444.6"	"ENST00000588807.1"	18	27	88.88888889	0.191128523	0.821	1.03241	1.03327	-179.186532	-179.186761	0.999771026	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	390	130	0.09538	0.45258	0.0517	0.5422	0.089563	0.499735579710145	0.23265	1	1	1	0.749	23.42706	1	"8_V_0.916"	"TIMM29"	"TIMM29_sequences_filtered_longestORFs_mafft_mincov_prank"	"TIMM29_all"	403	23	"0.170189955167"	"0.095"	"N"	"0.9804"	5	"93, 99, 282, 350, 364"	"N"	"0.9999998265998479"	0	"na"	"N"	"0.9999930817487553"	0	"na"	"Y"	"8.484710991059769e-09"	0	""	"N"	"0.393371822958025"	0	"na"	"TIMM29_sequences_filtered_longestORFs_mafft_prank"	"TIMM29"	282	12	"0.108850147192"	"0.078"	"N"	0.8387	2	"62, 270"	"N"	"0.9999996952501997"	0	"na"	"N"	"0.9999316309689258"	0	"na"	"Y"	"0.023237219430594515"	0	""	"N"	"1.0"	0	"na"	""	""	"shared"
"TIMM8B"	"TIMM8B"	"TIMM8B"	"orf10"	"TIMM8B"	"list25_COV_list3dataset2orf"	"translocase of inner mitochondrial membrane 8 homolog B"	"DDP2|TIM8B"	"no"	23	252	84	0.0408	0.44668	0.0215	0.5263	1	1	1	1	1	1	NA	NA	NA	""	"TIMM8B"	"ENSMLUG00000012225.1"	"ENSMLUT00000012226.1"	12	84	96.42857143	0.153186519	0.4987	1.23336	1.23336	-763.084152	-763.084359	0.999793021	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"TIMM8B"	0.992182485	1	""	NA	NA	NA	""	""	192	64	0.02394	0.23213	0.007	0.294	1	1	1	1	1	1	NA	NA	NA	""	"TIMM8B"	"TIMM8B_sequences_filtered_longestORFs_mafft_mincov_prank"	"TIMM8B_all"	207	22	"0.090266411477"	"0.136"	"Y"	"0.0011"	1	"85"	"N"	"0.9999999866154213"	0	"na"	"N"	"0.9955822853216804"	0	"na"	"Y"	"0.019565254802910916"	0	""	"Y"	"0.00012279429512095677"	1	"85"	"TIMM8B_sequences_filtered_longestORFs_mafft_prank"	"TIMM8B"	113	12	"0.034615966404"	"0.039"	"N"	1	0	"na"	"N"	"0.9999999999095053"	0	"na"	"N"	"0.9999998429372122"	0	"na"	"N"	"1.0"	0	"na"	"N"	"1.0"	0	"na"	""	""	"shared"
"TIMM9"	"TIMM9"	"TIMM9"	"nsp4"	"TIMM9"	"list24_COV_list2nonOrf"	"translocase of inner mitochondrial membrane 9"	"TIM9|TIM9A"	"no"	22	270	90	1e-04	0.08744	0	0.149	1	1	1	1	0.99973	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"TIMM9"	"ENSG00000100575.13"	"ENST00000555097.1"	17	44	100	NA	0.1194	0.07839	0.07839	-186.634969	-186.635077	0.999892006	NA	NA	NA	""	"TIMM9"	0.979349576	1	""	NA	NA	NA	""	""	258	86	1e-04	0.06635	0	0.114	1	1	1	1	0.9998	1	NA	NA	NA	""	"TIMM9"	"TIMM9_sequences_filtered_longestORFs_mafft_mincov_prank"	"TIMM9_all"	289	21	"0.126085640961"	"0.264"	"N"	"1.0000"	3	"73, 125, 196"	"N"	"0.9999999788851712"	0	"na"	"N"	"0.9566142032001991"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.7385990963704006"	0	"na"	"TIMM9_sequences_filtered_longestORFs_mafft_prank"	"TIMM9"	89	12	"0.136125645835"	"0.107"	"N"	1	0	"na"	"N"	"0.9999998509868075"	0	"na"	"N"	"0.9978432465154056"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.9990004998333987"	0	"na"	""	""	"shared"
"TLE1"	"TLE1"	"TLE1"	"nsp13"	"TLE1"	"list26_COV_list4dataset2nonOrf"	"transducin like enhancer of split 1"	"ESG|ESG1|GRG1"	"no"	24	2343	781	0.00794	0.34901	0.0031	0.3879	1	1	1	1	0.99854	1	NA	NA	NA	""	"TLE1"	"ENSMLUG00000003088.2"	"ENSMLUT00000003094.2"	4	771	98.70298314	0.022314958	0.3974	0.45031	0.45031	-4298.583177	-4298.583652	0.999525113	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"TLE1"	0.96270875	1	""	NA	NA	NA	""	""	1749	583	0.01766	0.12851	0.0025	0.1406	1	1	1	1	0.99981	1	NA	NA	NA	""	"TLE1"	"TLE1_sequences_filtered_longestORFs_mafft_mincov_prank_part5_prank"	"TLE1_all_part5"	2038	24	"na"	"na"	"Y"	"0.0000"	5	"703, 704, 831, 1725, 1865"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"TLE1_sequences_filtered_longestORFs_mafft_prank_part4_prank"	"TLE1_part4"	1349	12	"0.021379127643"	"0.021"	"Y"	0.0096	0	"na"	"N"	"0.999999737427095"	0	"na"	"N"	"0.10001183858193749"	0	"na"	"Y"	"5.373667079033846e-06"	0	""	"na"	"na"	0	"na"	"ok for dupl"	""	"shared"
"TLE3"	"TLE3"	"TLE3"	"nsp13"	"TLE3"	"list26_COV_list4dataset2nonOrf"	"transducin like enhancer of split 3"	"ESG|ESG3|GRG3|HsT18976"	"no"	23	2319	773	0.00491	0.33086	0.0023	0.4634	1	1	1	1	0.99863	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"TLE3"	"ENSG00000140332.15"	"ENST00000627388.2"	3	773	99.61190168	0.011459711	0.0814	0.0779	0.0779	-3328.83834	-3328.838424	0.999916004	NA	NA	NA	""	"TLE3"	1	1	""	NA	NA	NA	""	""	1653	551	1e-04	0.12647	0	0.1908	0.99194	1	1	1	0.99811	1	NA	NA	NA	""	"TLE3"	"TLE3_sequences_filtered_longestORFs_D1242gp2_prank"	"TLE3_1242-2"	5562	25	"na"	"na"	"Y"	"0.0000"	9	"1195, 2212, 3825, 4772, 5086, 5243, 5327, 5363, 5425"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"TLE3_sequences_filtered_longestORFs_D556gp2_prank"	"TLE3_556-2"	1952	12	"0.013531340208"	"0.012"	"N"	1	2	"211, 1011"	"N"	"0.9999999944566298"	0	"na"	"N"	"0.9999999965148163"	0	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	""	""	"shared"
"TLE5"	"TLE5"	"AES"	"nsp13"	"AES"	"list26_COV_list4dataset2nonOrf"	"amino-terminal enhancer of split"	"AES-1|AES-2|ESP1|GRG|GRG5|Grg-5|TLE5"	"no"	23	795	265	0.03715	0.65866	0.034	0.9163	1	1	1	1	1	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"AES"	1	1	""	NA	NA	NA	""	""	528	176	0.03919	0.35186	0.0199	0.5084	0.33912	1	0.61225	1	1	1	NA	NA	NA	""	"TLE5"	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	"TLE5_sequences_filtered_longestORFs_D98gp1_prank"	"TLE5_98-1"	283	12	"0.002111890609"	"0.002"	"N"	1	0	"na"	"N"	"0.9999999994261088"	0	"na"	"N"	"0.9999997057343968"	0	"na"	"N"	"0.9990004998333987"	0	"na"	"N"	"0.9930244429331737"	0	"na"	""	""	"onlybats"
"TM2D3"	"TM2D3"	"TM2D3"	"orf8"	"TM2D3"	"list25_COV_list3dataset2orf"	"TM2 domain containing 3"	"BLP2"	"no"	24	744	248	0.15463	0.57108	0.0762	0.493	0.81998	1	0.86452	1	0.97514	1	NA	NA	NA	""	"TM2D3"	"ENSMLUG00000012867.2"	"ENSMLUT00000012868.2"	7	168	77.97619048	0.125987331	1.0628	1.78587	1.78588	-1241.214775	-1241.214837	0.999938002	NA	NA	NA	""	"TM2D3"	"ENSG00000184277.12"	"ENST00000558677.5"	6	21	90.47619048	0.392413606	0.0737	0.16384	0.16383	-93.941226	-93.941223	0.999997	NA	NA	NA	""	"TM2D3"	0.987384863	1	""	NA	NA	NA	""	""	570	190	0.15692	0.3176	0.0442	0.2817	0.19703	0.89243	0.32898	1	0.43578	1	NA	NA	NA	""	"TM2D3"	"TM2D3_sequences_filtered_longestORFs_mafft_mincov_prank"	"TM2D3_all"	693	24	"0.163507807652"	"0.163"	"N"	"0.1993"	2	"22, 408"	"N"	"0.6684045586679997"	0	"na"	"Y"	"3.430580758022897e-05"	10	"3, 4, 7, 12, 13, 22, 335, 345, 399, 408"	"N"	"0.4061632932980087"	0	"na"	"N"	"0.2253726555394879"	0	"na"	"TM2D3_sequences_filtered_longestORFs_mafft_prank"	"TM2D3"	437	12	"0.072524501738"	"0.095"	"N"	1	2	"51, 168"	"N"	"0.9999999844217201"	0	"na"	"N"	"0.4403563462071517"	0	"na"	"Y"	"0.00020489764422076452"	0	""	"N"	"0.4404316545061274"	0	"na"	""	""	"shared"
"TMED5"	"TMED5"	"TMED5"	"orf9c"	"TMED5"	"list26_COV_list4dataset2nonOrf"	"transmembrane p24 trafficking protein 5"	"CGI-100|p24g2|p28"	"no"	24	690	230	0.20601	0.25994	0.0403	0.1956	1	1	1	1	1	1	NA	NA	NA	""	"TMED5"	"ENSMLUG00000005855.2"	"ENSMLUT00000005854.2"	12	230	96.95652174	0.171524106	0.3374	0.7916	0.79264	-1789.058873	-1788.027614	0.356557772	NA	NA	NA	""	"TMED5"	"ENSG00000117500.12"	"ENST00000370280.1"	18	163	98.1595092	0.121305926	0.1413	0.23614	0.23614	-862.837429	-862.837432	0.999997	NA	NA	NA	""	"TMED5"	1	1	""	NA	NA	NA	""	""	618	206	0.24636	0.23169	0.0404	0.1639	1	1	1	1	0.99995	1	NA	NA	NA	""	"TMED5"	"TMED5_sequences_filtered_longestORFs_mafft_mincov_prank"	"TMED5_all"	828	24	"0.142041245855"	"0.246"	"N"	"1.0000"	0	"na"	"N"	"0.9999896184062906"	0	"na"	"N"	"0.9996814693702539"	0	"na"	"N"	"0.9960079893440856"	0	"na"	"N"	"0.9821610323582721"	0	"na"	"TMED5_sequences_filtered_longestORFs_mafft_prank"	"TMED5"	484	11	"0.215128279257"	"0.216"	"Y"	0.0379	3	"81, 92, 149"	"N"	"0.9809204583363237"	0	"na"	"Y"	"0.016520072309041865"	16	"77, 79, 81, 92, 93, 94, 98, 103, 118, 119, 149, 378, 379, 418, 430, 443"	"N"	"0.7725952321070743"	0	"na"	"N"	"0.6107912690656443"	0	"na"	""	""	"shared"
"TMEM39B"	"TMEM39B"	"TMEM39B"	"orf9c"	"TMEM39B"	"list24_COV_list2nonOrf"	"transmembrane protein 39B"	"-"	"no"	24	1479	493	0.02611	0.35618	0.0127	0.4876	0.79256	1	0.01562	0.103684482758621	0.54675	1	2.802	1.11455	1	"27_S_0.931"	"TMEM39B"	"ENSMLUG00000001098.2"	"ENSMLUT00000001096.2"	14	493	97.76876268	0.045827183	0.2491	0.73561	0.75068	-3638.443569	-3637.831116	0.542019663	NA	NA	NA	""	"TMEM39B"	"ENSG00000121775.17"	"ENST00000441402.5"	15	194	97.42268041	0.284776497	0.1299	0.34659	0.35253	-1148.165807	-1146.539157	0.196587039	NA	NA	NA	""	"TMEM39B"	0.801578622	1	""	NA	NA	NA	""	""	1119	373	0.04573	0.15903	0.0097	0.2125	0.050521	0.353647	0.013311	0.1507275	0.033776	0.382463529411765	1.547	3.9348	1	"16_S_0.950"	"TMEM39B"	"TMEM39B_sequences_filtered_longestORFs_mafft_mincov_prank"	"TMEM39B_all"	1232	24	"0.031066125277"	"0.042"	"Y"	"0.0000"	3	"51, 277, 300"	"N"	"0.999999462436025"	0	"na"	"Y"	"0.0012595106626096717"	2	"302, 512"	"Y"	"4.1185887075334635e-06"	3	"51, 176, 221"	"Y"	"5.997038937209627e-09"	5	"51, 176, 221, 276, 302"	"TMEM39B_bat_same_mafft_prank"	"TMEM39B"	880	12	"0.0272350070390354"	"0.041"	"Y"	0	3	"217, 331, 332"	"N"	"0.999999995285634"	0	"na"	"N"	"0.999708222630975"	0	"na"	"Y"	"1.5181774326767543e-06"	2	"169, 216"	"na"	"na"	0	"na"	""	""	"shared"
"TMEM97"	"TMEM97"	"TMEM97"	"orf9c"	"TMEM97"	"list24_COV_list2nonOrf"	"transmembrane protein 97"	"MAC30"	"no"	24	531	177	0.17626	0.56778	0.0801	0.4544	1	1	1	1	1	1	NA	NA	NA	""	"TMEM97"	"ENSMLUG00000008705.2"	"ENSMLUT00000008690.2"	5	177	96.04519774	0.308861546	0.3549	0.91347	0.92408	-1313.650608	-1313.522072	0.879381904	NA	NA	NA	""	"TMEM97"	"ENSG00000109084.13"	"ENST00000336687.6"	19	70	90	0.127951045	0.3597	0.49482	0.49517	-404.504572	-404.521939	0.982782937	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	414	138	0.22013	0.38439	0.0621	0.2823	1	1	0.99968	1	1	1	NA	NA	NA	""	"TMEM97"	"TMEM97_sequences_filtered_longestORFs_mafft_mincov_prank"	"TMEM97_all"	1035	24	"0.167819929316"	"0.322"	"Y"	"0.0000"	8	"392, 458, 796, 808, 873, 881, 882, 1033"	"N"	"0.9999997544607897"	0	"na"	"N"	"0.9999947415289641"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.9980019986669264"	0	"na"	"TMEM97_sequences_filtered_longestORFs_mafft_prank"	"TMEM97"	236	12	"0.420879156212"	"0.471"	"N"	0.9586	11	"5, 29, 31, 42, 104, 107, 120, 157, 179, 188, 205"	"N"	"0.7340928477677238"	0	"na"	"N"	"0.34471649535720056"	0	"na"	"N"	"0.31254713161813774"	0	"na"	"N"	"0.12681829056798818"	0	"na"	""	""	"shared"
"TOMM70"	"TOMM70"	"TOMM70A"	"orf9b"	"TOMM70A"	"list25_COV_list3dataset2orf"	"translocase of outer mitochondrial membrane 70"	"TOMM70A|Tom70"	"no"	24	1827	609	0.05298	0.33556	0.0185	0.3495	1	1	0.62948	1	1	1	NA	NA	NA	""	"TOMM70"	"ENSMLUG00000004351.2"	"ENSMLUT00000004349.2"	7	625	82.56	0.033943485	0.4243	0.49252	0.49252	-3102.802866	-3102.803279	0.999587085	NA	NA	NA	""	"TOMM70"	"ENSG00000154174.7"	"ENST00000284320.5"	17	609	99.50738916	0.051737723	0.143	0.27585	0.27572	-3384.838087	-3384.292878	0.579720609	NA	NA	NA	""	"TOMM70A"	1	1	""	NA	NA	NA	""	""	1458	486	0.03332	0.18164	0.0067	0.2014	1	1	0.69563	1	1	1	NA	NA	NA	""	"TOMM70"	"TOMM70_sequences_filtered_longestORFs_mafft_mincov_prank"	"TOMM70_all"	641	24	"0.059415639954"	"0.054"	"N"	"1.0000"	0	"na"	"N"	"0.9875869801535943"	0	"na"	"Y"	"0.0343600371989326"	1	"62"	"N"	"0.8162782414252596"	0	"na"	"N"	"1.0"	0	"na"	"TOMM70_sequences_filtered_longestORFs_mafft_prank"	"TOMM70"	723	11	"0.029882210583"	"0.030"	"N"	1	0	"na"	"N"	"0.9999995844483192"	0	"na"	"N"	"0.9999999321098608"	0	"na"	"N"	"1.0"	0	"na"	"N"	"1.0"	0	"na"	""	""	"shared"
"TOR1A"	"TOR1A"	"TOR1A"	"orf8"	"TOR1A"	"list25_COV_list3dataset2orf"	"torsin family 1 member A"	"DQ2|DYT1"	"no"	24	999	333	0.07967	0.44641	0.0385	0.4838	1	1	1	1	1	1	NA	NA	NA	""	"TOR1A"	"ENSMLUG00000006890.2"	"ENSMLUT00000006884.2"	5	371	76.28032345	0.139303891	0.8003	1.48619	1.64303	-2351.61907	-2341.490297	3.99e-05	-2344.046035	0.023768091	3	"S65, S75, N83"	"TOR1A"	"ENSG00000136827.11"	"ENST00000351698.4"	14	333	91.89189189	0.121829084	0.2238	0.34598	0.34943	-1839.341021	-1835.394373	0.019319352	-1838.736927	0.009722163	2	"S57, E59"	"TOR1A"	1	1	""	NA	NA	NA	""	""	759	253	0.12827	0.29153	0.0347	0.2703	0.21479	0.929147752808989	0.40056	1	0.46022	1	NA	NA	NA	""	"TOR1A"	"TOR1A_sequences_filtered_longestORFs_mafft_mincov_prank_part1_prank"	"TOR1A_all_part1"	507	23	"0.099632009810"	"0.101"	"Y"	"0.0196"	3	"56, 408, 486"	"N"	"0.8947941317286731"	0	"na"	"N"	"0.09775517975045724"	0	"na"	"N"	"0.74081822068192"	0	"na"	"N"	"0.055299025094692394"	0	"na"	"TOR1A_sequences_filtered_longestORFs_duplication_remainingsequences_prank"	"TOR1A_rem"	604	12	"0.066585977696"	"0.080"	"N"	0.5671	2	"121, 365"	"N"	"0.9999999594665504"	0	"na"	"N"	"0.9355750222791034"	0	"na"	"N"	"1.0"	0	"na"	"Y"	"0.02670244886475937"	0	""	"dupl ok"	""	"shared"
"TOR1AIP1"	"TOR1AIP1"	"TOR1AIP1"	"nsp7"	"TOR1AIP1"	"list26_COV_list4dataset2nonOrf"	"torsin 1A interacting protein 1"	"LAP1|LAP1B|LGMD2Y"	"yes"	24	1761	587	0.51702	0.62903	0.1643	0.3177	0.00082508	0.0105885266666667	0.0023145	0.0253382027027027	0.0037125	0.0473736290322581	3.658	4.14571	7	"49_L_0.917,139_P_0.969,163_P_0.970,270_R_0.993,324_R_0.907,340_C_0.914,440_R_0.965"	"TOR1AIP1"	"ENSMLUG00000006221.2"	"ENSMLUT00000006225.2"	3	598	93.47826087	0.359822155	0.3745	0.66845	0.70424	-3591.897486	-3589.380923	0.080736622	NA	NA	NA	""	"TOR1AIP1"	"ENSG00000143337.18"	"ENST00000447964.1"	15	295	97.96610169	0.275693739	0.1852	0.49253	0.50872	-1980.718382	-1979.3108	0.244734336	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	1326	442	0.6327	0.46197	0.1321	0.2088	0.00033621	0.00761416764705882	0.00090021	0.021661303125	0.0016147	0.03885371875	18.37	2.87933	7	"24_P_0.955,72_P_0.990,88_P_0.990,120_Y_0.945,149_T_0.942,239_I_0.943,349_F_0.950"	"TOR1AIP1"	"TOR1AIP1_sequences_filtered_longestORFs_mafft_mincov_prank"	"TOR1AIP1_all"	1425	24	"0.577187484977"	"0.581"	"Y"	"0.0005"	27	"144, 184, 187, 237, 239, 385, 409, 430, 457, 731, 734, 838, 848, 853, 857, 980, 1040, 1056, 1058, 1060, 1061, 1077, 1078, 1084, 1086, 1096, 1107"	"Y"	"1.2484315979276648e-11"	1	"1040"	"Y"	"2.502738548107742e-12"	2	"848, 1040"	"Y"	"1.7539158731449243e-10"	3	"848, 1040, 1182"	"Y"	"4.7170863106397096e-14"	5	"838, 848, 1040, 1093, 1182"	"TOR1AIP1_sequences_filtered_longestORFs_mafft_prank"	"TOR1AIP1"	743	12	"0.558329321702"	"0.531"	"Y"	0	0	"na"	"Y"	"0.0018966215330895428"	1	"509"	"Y"	"0.00023452293549997097"	2	"509, 515"	"Y"	"0.00014848895196983343"	2	"509, 515"	"Y"	"7.610360616693669e-06"	4	"317, 501, 509, 515"	"PS yes"	""	"shared"
"TRIM59"	"TRIM59"	"TRIM59"	"orf3a"	"TRIM59"	"list23_COV_list1orf"	"tripartite motif containing 59"	"IFT80L|MRF1|RNF104|TRIM57|TSBF1"	"no"	22	1212	404	0.41501	0.51665	0.1273	0.3068	0.069322	0.286978172043011	0.13013	0.431896982758621	0.19086	0.886554166666667	9.802	2.27273	1	"162_H_0.953"	"TRIM59"	"ENSMLUG00000026537.1"	"ENSMLUT00000029823.1"	15	403	99.00744417	0.265264911	0.2441	1.15001	1.15339	-3946.982058	-3944.94036	0.129808109	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	1074	358	0.4239	0.38412	0.095	0.2242	0.75049	1	0.87123	1	0.95092	1	NA	NA	NA	""	"TRIM59"	"TRIM59_sequences_filtered_longestORFs_mafft_mincov_prank"	"TRIM59_all"	2041	23	"0.306210926693"	"0.294"	"Y"	"0.0010"	8	"522, 527, 555, 561, 607, 1946, 1997, 2022"	"N"	"0.22440658792179846"	0	"na"	"Y"	"0.029867764315102553"	2	"522, 562"	"N"	"0.2553806759881334"	0	"na"	"Y"	"0.031335614024921986"	0	""	"TRIM59_sequences_filtered_longestORFs_mafft_prank"	"TRIM59"	439	12	"0.316982231988"	"0.274"	"N"	0.955	4	"239, 256, 354, 380"	"N"	"0.9999949480425412"	0	"na"	"N"	"0.05724083315647518"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.08492387601959336"	0	"na"	""	""	"shared"
"TRMT1"	"TRMT1"	"TRMT1"	"nsp5_C145A"	"TRMT1"	"list24_COV_list2nonOrf"	"tRNA methyltransferase 1"	"TRM1"	"yes"	23	1995	665	0.32049	1.20036	0.2581	0.8055	6.4958e-06	0.000208406916666667	3.8427e-08	3.69859875e-06	5.857e-07	3.75824166666667e-05	0.631	16.61671	3	"2_S_0.997,3_H_0.995,5_R_0.976"	"TRMT1"	"ENSMLUG00000012809.2"	"ENSMLUT00000012821.2"	7	672	93.00595238	0.200525465	0.3188	0.95425	0.96418	-4876.393271	-4874.829685	0.209383873	NA	NA	NA	""	"TRMT1"	"ENSG00000104907.12"	"ENST00000437766.5"	4	660	96.21212121	0.244542375	0.2106	0.37666	0.38396	-3617.799544	-3616.444316	0.257888489	NA	NA	NA	""	"TRMT1"	1	1	""	NA	NA	NA	""	""	1263	421	0.36782	0.71903	0.1682	0.4573	7.0108e-13	1.349579e-10	5.3878e-13	1.0371515e-10	4.8468e-12	9.33009e-10	0.799	38.7804	3	"2_S_1.000,3_H_1.000,4_R_0.999"	"TRMT1"	"TRMT1_sequences_filtered_longestORFs_mafft_mincov_prank"	"TRMT1_all"	1068	23	"0.221247278753"	"0.201"	"Y"	"0.0002"	0	"na"	"N"	"0.9999999638539527"	0	"na"	"Y"	"0.004488704483443964"	4	"369, 969, 990, 1047"	"N"	"0.7025771933778344"	0	"na"	"Y"	"2.653621909059236e-05"	0	""	"TRMT1_sequences_filtered_longestORFs_mafft_prank"	"TRMT1"	704	12	"0.212290337739"	"0.192"	"Y"	0	12	"2, 3, 24, 37, 54, 253, 254, 289, 324, 529, 652, 686"	"N"	"0.9999996975075649"	0	"na"	"N"	"0.526395175937924"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.9920319148372483"	0	"na"	""	""	"shared"
"TUBGCP2"	"TUBGCP2"	"TUBGCP2"	"M"	"TUBGCP2"	"list26_COV_list4dataset2nonOrf"	"tubulin gamma complex associated protein 2"	"ALP4|GCP-2|GCP2|Grip103|SPBC97|SPC97|Spc97p|h103p|hGCP2|hSpc97"	"no"	24	2796	932	0.04985	0.71657	0.049	0.9833	0.27049	0.68064477124183	0.45191	0.961245027624309	1	1	NA	NA	NA	""	"TUBGCP2"	"ENSMLUG00000005342.2"	"ENSMLUT00000005349.2"	8	909	92.29922992	0.075141747	0.4609	0.97117	0.97118	-6124.705355	-6124.707071	0.998285471	NA	NA	NA	""	"TUBGCP2"	"ENSG00000130640.13"	"ENST00000368563.6"	14	903	97.89590255	0.084994374	0.2728	0.63111	0.63111	-6250.382718	-6250.382727	0.999991	NA	NA	NA	""	"TUBGCP2"	0.982777377	1	""	NA	NA	NA	""	""	1845	615	0.04666	0.29126	0.02	0.4283	1	1	1	1	1	1	NA	NA	NA	""	"TUBGCP2"	"TUBGCP2_sequences_filtered_longestORFs_mafft_mincov_prank"	"TUBGCP2_all"	1664	24	"0.070451478024"	"0.061"	"Y"	"0.0000"	5	"444, 445, 1331, 1463, 1613"	"N"	"0.9999999509855128"	0	"na"	"Y"	"0.00013629384562998488"	2	"238, 1550"	"Y"	"9.844623464290293e-05"	0	""	"Y"	"0.0064608137605138396"	1	"238"	"TUBGCP2_sequences_filtered_longestORFs_mafft_prank"	"TUBGCP2"	1035	12	"0.055037331258"	"0.044"	"N"	0.8328	1	"954"	"N"	"0.9999999146402879"	0	"na"	"N"	"0.9999999871270121"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.9910403787728692"	0	"na"	""	""	"shared"
"TUBGCP3"	"TUBGCP3"	"TUBGCP3"	"M"	"TUBGCP3"	"list26_COV_list4dataset2nonOrf"	"tubulin gamma complex associated protein 3"	"104p|ALP6|GCP3|Grip104|SPBC98|Spc98|Spc98p"	"no"	24	2724	908	0.06191	0.48631	0.0295	0.4765	1	1	1	1	1	1	NA	NA	NA	""	"TUBGCP3"	"ENSMLUG00000003007.2"	"ENSMLUT00000003016.2"	3	907	99.44873208	0.060376747	0.3149	0.32284	0.32287	-4783.799705	-4783.798937	0.999232295	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"TUBGCP3"	1	1	""	NA	NA	NA	""	""	2145	715	0.08588	0.30473	0.0254	0.2959	0.99403	1	0.94154	1	1	1	NA	NA	NA	""	"TUBGCP3"	"TUBGCP3_sequences_filtered_longestORFs_mafft_mincov_prank"	"TUBGCP3_all"	1850	24	"0.059328763974"	"0.060"	"Y"	"0.0094"	8	"400, 668, 696, 781, 803, 1013, 1453, 1672"	"N"	"0.9999996171337266"	0	"na"	"N"	"0.6866955291166233"	0	"na"	"N"	"1.0"	0	"na"	"N"	"1.0"	0	"na"	"TUBGCP3_sequences_filtered_longestORFs_mafft_prank"	"TUBGCP3"	1156	12	"0.073030126757"	"0.072"	"N"	1	2	"387, 430"	"N"	"0.33879849700735243"	0	"na"	"Y"	"1.2025913118475392e-07"	3	"387, 464, 490"	"N"	"0.5147880584569597"	0	"na"	"Y"	"0.018949078056685893"	1	"387"	""	""	"shared"
"TYSND1"	"TYSND1"	"TYSND1"	"nsp12"	"TYSND1"	"list24_COV_list2nonOrf"	"trypsin domain containing 1"	"NET41"	"no"	24	1701	567	0.19443	0.82089	0.1392	0.716	1	1	1	1	1	1	NA	NA	NA	""	"TYSND1"	"ENSMLUG00000024592.1"	"ENSMLUT00000029504.1"	7	501	94.21157685	0.250696654	0.4319	1.40747	1.54659	-4264.492143	-4259.43093	0.006337867	-4263.3958	0.004862878	NA	""	"TYSND1"	"ENSG00000156521.13"	"ENST00000287078.6"	15	567	95.23809524	0.264137739	0.2301	0.68808	0.68879	-4116.047002	-4116.042735	0.995742091	NA	NA	NA	""	"TYSND1"	0.97075562	1	""	NA	NA	NA	""	""	921	307	0.29466	0.41853	0.0862	0.2927	0.75011	1	0.94656	1	0.9368	1	NA	NA	NA	""	"TYSND1"	"TYSND1_sequences_filtered_longestORFs_mafft_mincov_prank"	"TYSND1_all"	2653	21	"na"	"na"	"N"	"0.8539"	9	"178, 192, 195, 255, 528, 532, 652, 1640, 2313"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"TYSND1_bat_select_mafft_prank"	"TYSND1"	676	8	"0.21586721789783"	"0.184"	"N"	0.2118	5	"54, 93, 95, 124, 205"	"N"	"0.999998961509475"	0	"na"	"Y"	"0.00164138799933957"	1	"95"	"N"	"1.0"	0	"na"	"Y"	"1.0838402897292556e-06"	2	"95, 317"	""	""	"shared"
"UBAP2"	"UBAP2"	"UBAP2"	"nsp12"	"UBAP2"	"list24_COV_list2nonOrf"	"ubiquitin associated protein 2"	"UBAP-2"	"no"	24	3384	1128	0.37831	0.50461	0.1092	0.2886	0.015438	0.0990605	0.02833	0.165258333333333	0.061103	0.398722966101695	1.884	3.66493	2	"25_M_0.958,469_T_0.905"	"UBAP2"	"ENSMLUG00000006809.2"	"ENSMLUT00000006834.2"	8	1130	95.13274336	0.179086694	0.1872	0.49318	0.49317	-7073.846561	-7073.846562	0.999999	NA	NA	NA	""	"UBAP2"	"ENSG00000137073.21"	"ENST00000379239.8"	17	359	98.05013928	0.238570131	0.1826	0.42619	0.42767	-2270.060113	-2269.804598	0.774517519	NA	NA	NA	""	"UBAP2"	1	1	""	NA	NA	NA	""	""	2850	950	0.48524	0.31756	0.0793	0.1634	1	1	0.99885	1	1	1	NA	NA	NA	""	"UBAP2"	"UBAP2_sequences_filtered_longestORFs_mafft_mincov_prank"	"UBAP2_all"	2044	24	"0.314627701475"	"0.319"	"N"	"0.0883"	13	"569, 1183, 1189, 1271, 1390, 1449, 1457, 1584, 1656, 1668, 1673, 1674, 1861"	"Y"	"0.04356681576239805"	0	""	"Y"	"0.00019803234787945596"	2	"570, 1664"	"Y"	"0.010224177708430196"	0	""	"Y"	"6.585863546181317e-05"	0	""	"UBAP2_sequences_filtered_longestORFs_mafft_prank"	"UBAP2"	1504	12	"0.237830734331"	"0.242"	"N"	1	0	"na"	"N"	"0.9999996078168666"	0	"na"	"N"	"0.9998839629323042"	0	"na"	"N"	"0.9980019986687417"	0	"na"	"N"	"1.0"	0	"na"	""	""	"shared"
"UBAP2L"	"UBAP2L"	"UBAP2L"	"nsp12"	"UBAP2L"	"list26_COV_list4dataset2nonOrf"	"ubiquitin associated protein 2 like"	"NICE-4|NICE4"	"no"	20	3264	1088	0.05012	0.1409	0.0065	0.1304	1	1	1	1	0.99967	1	NA	NA	NA	""	"UBAP2L"	"ENSMLUG00000012931.2"	"ENSMLUT00000012940.2"	11	1088	98.4375	0.059892632	0.2704	0.52839	0.52839	-7053.772669	-7053.773041	0.999628069	NA	NA	NA	""	"UBAP2L"	"ENSG00000143569.18"	"ENST00000428931.5"	9	1088	99.72426471	0.023452657	0.0273	0.03667	0.03668	-4683.160524	-4683.161165	0.999359205	NA	NA	NA	""	"UBAP2L"	1	1	""	NA	NA	NA	""	""	2865	955	0.06899	0.09125	0.0058	0.0835	1	1	1	1	0.9999	1	NA	NA	NA	""	"UBAP2L"	"UBAP2L_sequences_filtered_longestORFs_mafft_mincov_prank"	"UBAP2L_all"	4315	24	"na"	"na"	"Y"	"0.0000"	4	"113, 249, 484, 876"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"UBAP2L_sequences_filtered_longestORFs_mafft_prank"	"UBAP2L"	3418	12	"na"	"na"	"Y"	0	3	"271, 476, 3110"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"could be cut at nt 5346 to reanalyze the 5-ter. Crashed because aln too long I think"	"UBAP2L. Could not cut in the end. Many slice variants. Decided to keep whole and re-run. If too long, quit"	"shared"
"UBXN8"	"UBXN8"	"UBXN8"	"orf9c"	"UBXN8"	"list24_COV_list2nonOrf"	"UBX domain protein 8"	"D8S2298E|REP8|UBXD6"	"no"	24	813	271	0.50084	0.84159	0.2194	0.438	0.028106	0.152405774647887	0.053229	0.23829261627907	0.092445	0.5392625	3.737	3.57202	1	"186_-_0.936"	"UBXN8"	"ENSMLUG00000016846.2"	"ENSMLUT00000016850.2"	6	276	97.46376812	0.274309794	0.2437	0.48252	0.48252	-1701.535277	-1701.535285	0.999992	NA	NA	NA	""	"UBXN8"	"ENSG00000104691.14"	"ENST00000518059.5"	16	94	91.4893617	0.304674755	0.1752	0.52166	0.52167	-582.550308	-582.550748	0.999560097	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	663	221	0.62671	0.63926	0.1834	0.2926	0.0023872	0.0314288333333333	0.0071576	0.0918558666666667	0.0099571	0.136910125	2.326	6.34799	2	"160_-_0.982,161_-_0.963"	"UBXN8"	"UBXN8_sequences_filtered_longestORFs_mafft_mincov_prank"	"UBXN8_all"	699	23	"0.372707393059"	"0.357"	"Y"	"0.0023"	8	"318, 405, 446, 473, 505, 509, 513, 627"	"N"	"0.9999984149270688"	0	"na"	"N"	"0.9999874088127017"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.9733612415242943"	0	"na"	"UBXN8_sequences_filtered_longestORFs_mafft_prank"	"UBXN8"	305	12	"0.404541986019"	"0.393"	"N"	1	1	"142"	"N"	"0.8595500425717232"	0	"na"	"N"	"0.570834465560978"	0	"na"	"N"	"0.8253068684916764"	0	"na"	"N"	"0.48772673462580574"	0	"na"	""	""	"shared"
"UGGT2"	"UGGT2"	"UGGT2"	"orf8"	"UGGT2"	"list25_COV_list3dataset2orf"	"UDP-glucose glycoprotein glucosyltransferase 2"	"HUGT2|UGCGL2|UGT2"	"yes"	23	4551	1517	0.35533	0.48303	0.1111	0.3127	0.00010251	0.00207717631578947	0.0001047	0.00223941666666667	0.00054498	0.0110430157894737	8.35	2.43106	3	"640_M_0.913,665_R_0.967,1106_R_0.967"	"UGGT2"	"ENSMLUG00000013792.2"	"ENSMLUT00000013809.2"	7	1468	97.68392371	0.218251257	0.4634	0.69338	0.70762	-9586.277286	-9585.18169	0.334340281	NA	NA	NA	""	"UGGT2"	"ENSG00000102595.19"	"ENST00000638479.1"	16	280	98.57142857	0.198271962	0.1231	0.29704	0.30399	-1640.324902	-1637.365534	0.051851677	NA	NA	NA	""	"UGGT2"	1.89e-05	0.003004396	"UDP-glucose glycoprotein glucosyltransferase 2"	NA	NA	NA	""	"UDP-glucose:glycoprotein glucosyltransferase (UGT) is a soluble protein of the endoplasmic reticulum (ER) that selectively reglucosylates unfolded glycoproteins, thus providing quality control for protein transport out of the ER."	3948	1316	0.35856	0.34621	0.0812	0.2264	0.46686	1	0.6154	1	0.7956	1	NA	NA	NA	""	"UGGT2"	"UGGT2_sequences_filtered_longestORFs_mafft_mincov_prank"	"UGGT2_all"	2127	22	"0.368713980825"	"0.315"	"N"	"0.6342"	19	"251, 252, 284, 310, 315, 355, 360, 399, 425, 453, 495, 509, 587, 764, 765, 1026, 1088, 1190, 1559"	"Y"	"0.020000998743095837"	47	"59, 316, 334, 392, 399, 417, 425, 462, 495, 496, 509, 580, 582, 595, 628, 633, 672, 683, 697, 706, 707, 764, 769, 801, 836, 839, 843, 899, 917, 936, 964, 988, 995, 998, 1018, 1044, 1088, 1114, 1190, 1203, 1212, 1230, 1330, 1345, 1348, 1358, 1363"	"Y"	"0.0007007729591462683"	14	"334, 509, 582, 672, 697, 764, 769, 964, 988, 1044, 1114, 1190, 1330, 1345"	"Y"	"0.00892409818605493"	0	""	"Y"	"3.4209745443492555e-05"	3	"697, 1044, 1190"	"UGGT2_sequences_filtered_longestORFs_mafft_prank"	"UGGT2"	1721	12	"0.271849324024"	"0.248"	"Y"	0.015	15	"154, 156, 623, 677, 691, 738, 780, 876, 915, 932, 1051, 1174, 1301, 1329, 1349"	"N"	"0.9999994895407719"	0	"na"	"N"	"0.4009484925650369"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.3686159363035691"	0	"na"	""	""	"shared"
"UPF1"	"UPF1"	"UPF1"	"N"	"UPF1"	"list26_COV_list4dataset2nonOrf"	"UPF1, RNA helicase and ATPase"	"HUPF1|NORF1|RENT1|pNORF1|smg-2"	"no"	24	3390	1130	0.00093	0.54693	8e-04	0.8847	1	1	1	1	0.99397	1	NA	NA	NA	""	"UPF1"	"ENSMLUG00000012122.2"	"ENSMLUT00000012134.2"	3	1119	98.39142091	0.001231162	0.2225	0.20224	0.20225	-5134.073382	-5134.074101	0.999281258	NA	NA	NA	""	"UPF1"	"ENSG00000005007.12"	"ENST00000599848.5"	12	1130	90.08849558	0.062638737	0.1437	0.42917	0.40573	-5850.36909	-5756.191655	1.26e-41	-5819.088195	3.41e-29	11	"A65, A67, A69, A70, A71, Q73, L74, D75, A76, G61, P62"	"UPF1"	1	1	""	NA	NA	NA	""	""	2289	763	1e-04	0.23447	0	0.3784	1	1	1	1	0.99607	1	NA	NA	NA	""	"UPF1"	"UPF1_sequences_filtered_longestORFs_mafft_mincov_prank"	"UPF1_all"	1740	24	"na"	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"na"	"na"	0	"na"	"UPF1_sequences_filtered_longestORFs_mafft_prank"	"UPF1"	1268	12	"0.005967468791"	"0.004"	"N"	1	0	"na"	"N"	"0.9999999999008651"	0	"na"	"N"	"0.9999900181399214"	0	"na"	"N"	"0.9940179640545284"	0	"na"	"N"	"0.9940179640545284"	0	"na"	""	""	"shared"
"USP13"	"USP13"	"USP13"	"nsp13"	"USP13"	"list26_COV_list4dataset2nonOrf"	"ubiquitin specific peptidase 13"	"ISOT3|IsoT-3"	"no"	24	2592	864	0.05031	0.54252	0.0277	0.5498	1	1	1	1	1	1	NA	NA	NA	""	"USP13"	"ENSMLUG00000013714.2"	"ENSMLUT00000013725.2"	6	852	84.50704225	0.051623599	0.3758	0.57302	0.58116	-4583.477402	-4578.42332	0.006383224	-4581.966746	0.007765153	1	"T131"	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"USP13"	1	1	""	NA	NA	NA	""	""	1896	632	0.06944	0.30839	0.0215	0.31	1	1	1	1	1	1	NA	NA	NA	""	"USP13"	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	"USP13_sequences_filtered_longestORFs_mafft_prank"	"USP13"	957	12	"0.037174112882"	"0.037"	"N"	1	2	"374, 873"	"N"	"0.9999987827948775"	0	"na"	"Y"	"0.0190013570231371"	2	"586, 706"	"N"	"1.0"	0	"na"	"N"	"0.99900049983408"	0	"na"	""	""	"onlybats"
"USP54"	"USP54"	"USP54"	"nsp12"	"USP54"	"list24_COV_list2nonOrf"	"ubiquitin specific peptidase 54"	"C10orf29|bA137L10.3|bA137L10.4"	"yes"	22	5058	1686	0.42393	0.34784	0.0824	0.1943	0.0024524	0.0252063552631579	0.010016	0.0803366666666667	0.010077	0.10485527027027	0.23	10.3092	1	"1491_M_0.992"	"USP54"	"ENSMLUG00000012728.2"	"ENSMLUT00000012728.2"	12	1587	87.71266541	0.26879749	0.2314	0.96202	0.96413	-12307.94479	-12306.97869	0.38056511	NA	NA	NA	""	"USP54"	"ENSG00000166348.18"	"ENST00000422491.6"	13	726	98.48484848	0.723739102	0.1146	0.36231	0.36547	-4514.93199	-4511.186064	0.023613753	-4514.93199	0.006197878	1	"M531"	"USP54"	0.970088998	1	""	NA	NA	NA	""	""	4584	1528	0.41709	0.27595	0.0652	0.1563	0.35892	1	0.64101	1	0.65645	1	NA	NA	NA	""	"USP54"	"USP54_sequences_filtered_longestORFs_mafft_mincov_prank"	"USP54_all"	2486	24	"0.386068465868"	"0.385"	"N"	"0.6967"	22	"464, 1198, 1478, 1525, 1562, 1591, 1627, 1635, 1688, 1712, 1765, 1784, 1862, 1875, 1988, 1989, 1996, 2118, 2234, 2341, 2347, 2410"	"Y"	"4.585969349940591e-12"	2	"1478, 2234"	"Y"	"1.025159258712707e-12"	2	"1478, 2234"	"Y"	"6.791054347170535e-13"	2	"1478, 2234"	"na"	"na"	0	"na"	"USP54_sequences_filtered_longestORFs_mafft_prank"	"USP54"	2053	11	"0.366806019369"	"0.362"	"Y"	0.0301	11	"845, 1129, 1160, 1290, 1291, 1405, 1412, 1732, 1823, 1939, 1985"	"N"	"0.9997345689145414"	0	"na"	"N"	"0.15291027386116157"	0	"na"	"N"	"0.5927396589958697"	0	"na"	"N"	"0.31192266203294183"	0	"na"	""	""	"shared"
"VPS11"	"VPS11"	"VPS11"	"orf3a"	"VPS11"	"list23_COV_list1orf"	"VPS11, CORVET/HOPS core subunit"	"END1|HLD12|PEP5|RNF108|hVPS11"	"no"	24	2826	942	0.04236	0.3332	0.0151	0.3575	0.99681	1	0.10871	0.391152803738318	1	1	NA	NA	NA	""	"VPS11"	"ENSMLUG00000004793.2"	"ENSMLUT00000004798.2"	13	943	98.83351007	0.055926261	0.3084	0.82222	0.824	-7277.956573	-7277.724273	0.792708275	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"VPS11"	0.402188916	1	""	NA	NA	NA	""	""	2307	769	0.03257	0.20794	0.0079	0.2425	0.80883	1	0.15067	0.878908333333333	0.97115	1	NA	NA	NA	""	"VPS11"	"VPS11_sequences_filtered_longestORFs_mafft_mincov_prank"	"VPS11_all"	1500	24	"0.048270606305"	"0.042"	"N"	"0.5166"	5	"440, 528, 682, 787, 854"	"N"	"0.9999985946152136"	0	"na"	"Y"	"0.0008361633364003558"	3	"789, 854, 1373"	"N"	"1.0"	0	"na"	"N"	"1.0"	0	"na"	"VPS11_sequences_filtered_longestORFs_mafft_prank"	"VPS11"	1166	12	"0.078603582166"	"0.072"	"N"	0.0824	5	"27, 304, 314, 591, 596"	"N"	"0.9999993365374775"	0	"na"	"Y"	"0.012111394464395"	4	"21, 63, 342, 596"	"N"	"1.0"	0	"na"	"N"	"0.5117085777865054"	0	"na"	""	""	"shared"
"VPS39"	"VPS39"	"VPS39"	"orf3a"	"VPS39"	"list25_COV_list3dataset2orf"	"VPS39, HOPS complex subunit"	"TLP|VAM6|hVam6p"	"yes"	24	2664	888	0.07692	0.33728	0.0244	0.3168	0.0053557	0.0458209888888889	0.0029118	0.0294919871794872	0.021125	0.180736111111111	0.32	6.7796	2	"58_S_0.965,616_S_0.922"	"VPS39"	"ENSMLUG00000000645.2"	"ENSMLUT00000000653.2"	11	888	93.01801802	0.049487979	0.3105	0.7106	0.71289	-6078.198643	-6078.048493	0.86057888	NA	NA	NA	""	"VPS39"	"ENSG00000166887.15"	"ENST00000318006.9"	17	876	97.26027397	0.02655803	0.1281	0.27595	0.27723	-4843.388677	-4843.241397	0.863052289	NA	NA	NA	""	"VPS39"	0.711489244	1	""	NA	NA	NA	""	""	2259	753	0.08385	0.2275	0.0175	0.2092	0.011857	0.120130131578947	0.019509	0.202999054054054	0.042734	0.439436973684211	0.243	9.68284	1	"42_S_0.966"	"VPS39"	"VPS39_sequences_filtered_longestORFs_mafft_mincov_prank"	"VPS39_all"	1501	23	"0.046946875948"	"0.052"	"Y"	"0.0000"	6	"68, 135, 146, 169, 225, 706"	"Y"	"7.272055658525019e-16"	1	"146"	"Y"	"2.5399423605918594e-30"	1	"146"	"Y"	"2.7057022431548876e-16"	1	"146"	"Y"	"1.5006105308565566e-22"	1	"146"	"VPS39_sequences_filtered_longestORFs_mafft_prank"	"VPS39"	1042	12	"0.056596878456"	"0.060"	"Y"	0	4	"79, 115, 930, 933"	"Y"	"0.0036263867910577537"	1	"115"	"Y"	"3.2872363224224216e-11"	3	"115, 464, 723"	"Y"	"0.002538961855010523"	1	"115"	"Y"	"1.5934882242290877e-05"	1	"115"	"position 115 due to internal splice variant"	""	"shared"
"WASHC4"	"WASHC4"	"KIAA1033"	"nsp2"	"KIAA1033"	"list24_COV_list2nonOrf"	"WASH complex subunit 4"	"KIAA1033|MRT43|SWIP"	"no"	24	3525	1175	0.05497	0.24576	0.0145	0.2639	1	1	1	1	1	1	NA	NA	NA	""	"WASHC4"	"ENSMLUG00000007308.2"	"ENSMLUT00000007385.2"	9	1174	94.46337308	0.033211761	0.2526	0.43697	0.43697	-6679.499731	-6679.500143	0.999588085	NA	NA	NA	""	"WASHC4"	"ENSG00000136051.13"	"ENST00000620430.4"	16	1175	95.74468085	0.032295069	0.1108	0.18987	0.18987	-5740.674872	-5740.67551	0.999362203	NA	NA	NA	""	"KIAA1033"	0.649735307	1	""	NA	NA	NA	""	""	3150	1050	0.04959	0.16797	0.0092	0.1849	1	1	1	1	1	1	NA	NA	NA	""	"WASHC4"	"WASHC4_sequences_filtered_longestORFs_mafft_mincov_prank"	"WASHC4_all"	1602	23	"0.054671143559"	"0.054"	"Y"	"0.0000"	32	"191, 361, 416, 453, 483, 510, 541, 571, 577, 602, 606, 763, 798, 802, 909, 818, 846, 850, 885, 891, 941, 1013, 1027, 1077, 1185, 1211, 1220, 1404, 1432, 1439, 1445, 1447"	"N"	"0.9934604233737435"	0	"na"	"Y"	"0.00020410173498656788"	3	"891, 1447, 1448"	"N"	"0.835270211411029"	0	"na"	"N"	"0.18787094775098143"	0	"na"	"WASHC4_sequences_filtered_longestORFs_mafft_prank"	"WASHC4"	1291	12	"0.047673831087"	"0.043"	"Y"	2e-04	1	"37"	"N"	"0.9999992783153051"	0	"na"	"Y"	"9.046577638308179e-07"	16	"37, 242, 245, 389, 506, 578, 630, 1073, 1084, 1152, 1176, 1207, 1208, 1267, 1275, 1278"	"N"	"0.9990004998331715"	0	"na"	"N"	"0.5127330190420621"	0	"na"	""	""	"shared"
"WFS1"	"WFS1"	"WFS1"	"orf9c"	"WFS1"	"list26_COV_list4dataset2nonOrf"	"wolframin ER transmembrane glycoprotein"	"CTRCT41|WFRS|WFS|WFSL"	"no"	24	2676	892	0.05634	0.83163	0.0831	1.4742	0.20548	0.577443795620438	0.020523	0.129530409836066	0.56458	1	1.077	1.68628	3	"57_A_0.966,116_N_0.914,117_T_0.922"	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"WFS1"	"ENSG00000109501.13"	"ENST00000506362.1"	15	251	97.21115538	0.114656782	0.2466	0.63994	0.64766	-1677.785695	-1675.78902	0.135786022	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	1647	549	0.0819	0.34708	0.0459	0.5602	0.34967	1	0.4132	1	0.65158	1	NA	NA	NA	""	"WFS1"	"WFS1_sequences_filtered_longestORFs_mafft_mincov_prank"	"WFS1_all"	1072	24	"0.081575261516"	"0.056"	"N"	"0.2613"	6	"78, 118, 486, 768, 806, 1004"	"N"	"0.9999996897186547"	0	"na"	"Y"	"9.570229689317189e-07"	5	"101, 118, 125, 230, 772"	"N"	"0.39971639333834935"	0	"na"	"Y"	"2.184769995878869e-06"	2	"118, 230"	"WFS1_sequences_filtered_longestORFs_mafft_prank"	"WFS1"	1109	11	"0.115587068116"	"0.087"	"Y"	0.0287	10	"166, 217, 483, 542, 647, 749, 768, 790, 888, 893"	"N"	"0.9999992486685281"	0	"na"	"Y"	"0.03804197055110089"	1	"166"	"N"	"1.0"	0	"na"	"N"	"0.5449833692075639"	0	"na"	""	""	"shared"
"YIF1A"	"YIF1A"	"YIF1A"	"M"	"YIF1A"	"list26_COV_list4dataset2nonOrf"	"Yip1 interacting factor homolog A, membrane trafficking protein"	"54TM|FinGER7|YIF1|YIF1P"	"no"	24	882	294	0.12933	0.36727	0.0442	0.3414	0.096034	0.366070198019802	0.2503	0.664589655172414	0.34712	1	0.448	10.38547	1	"43_P_0.926"	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"YIF1A"	"ENSG00000174851.15"	"ENST00000528575.1"	19	160	85	0.165053289	0.1698	0.2852	0.31847	-784.604746	-783.79045	0.442951055	NA	NA	NA	""	"YIF1A"	1	1	""	NA	NA	NA	""	""	690	230	0.14733	0.2433	0.0324	0.2198	0.60503	1	0.82915	1	0.89112	1	NA	NA	NA	""	"YIF1A"	"YIF1A_sequences_filtered_longestORFs_mafft_mincov_prank_part1_prank"	"YIF1A_all_part1"	1223	24	"0.122099669920"	"0.108"	"N"	"1.0000"	1	"190"	"N"	"0.9999998503785831"	0	"na"	"N"	"0.9986341687072853"	0	"na"	"N"	"0.7276027884144418"	0	"na"	"N"	"0.2608003778811103"	0	"na"	"YIF1A_sequences_filtered_longestORFs_mafft_prank_part2_prank"	"YIF1A_part2"	307	12	"0.092980087519"	"0.083"	"N"	1	0	"na"	"N"	"0.9999994430788052"	0	"na"	"N"	"0.9999999928145371"	0	"na"	"N"	"1.0"	0	"na"	"N"	"1.0"	0	"na"	"dupl yes"	""	"shared"
"ZC3H18"	"ZC3H18"	"ZC3H18"	"E"	"ZC3H18"	"list26_COV_list4dataset2nonOrf"	"zinc finger CCCH-type containing 18"	"NHN1"	"no"	24	2967	989	0.1117	0.58973	0.0604	0.5411	1	1	1	1	1	1	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	"ZC3H18"	"ENSG00000158545.15"	"ENST00000565583.1"	18	197	95.93908629	0.085936944	0.247	0.56059	0.56201	-1285.422209	-1285.384522	0.963014317	NA	NA	NA	""	"ZC3H18"	0.871831956	1	""	NA	NA	NA	""	""	1926	642	0.14281	0.26642	0.0343	0.2403	0.20603	0.90234375	0.17233	0.934465492957747	0.4399	1	NA	NA	NA	""	"ZC3H18"	"ZC3H18_sequences_filtered_longestORFs_mafft_mincov_prank"	"ZC3H18_all"	1100	24	"0.087671644891"	"0.083"	"N"	"0.6012"	3	"722, 782, 981"	"N"	"0.9999993848816375"	0	"na"	"Y"	"0.015299480271226013"	0	""	"N"	"1.0"	0	"na"	"N"	"1.0"	0	"na"	"ZC3H18_sequences_filtered_longestORFs_mafft_prank"	"ZC3H18"	1226	11	"0.200106682861"	"0.187"	"Y"	0.0016	4	"54, 654, 771, 1080"	"N"	"0.9999991996195169"	0	"na"	"N"	"0.5258352764131282"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.05596661089965757"	0	"na"	""	""	"shared"
"ZC3H7A"	"ZC3H7A"	"ZC3H7A"	"nsp12"	"ZC3H7A"	"list24_COV_list2nonOrf"	"zinc finger CCCH-type containing 7A"	"HSPC055|ZC3H7|ZC3HDC7"	"no"	24	2919	973	0.0703	0.28797	0.0222	0.3162	1	1	1	1	1	1	NA	NA	NA	""	"ZC3H7A"	"ENSMLUG00000016057.2"	"ENSMLUT00000016063.2"	14	972	96.39917695	0.145913877	0.2854	0.92464	0.92703	-7996.266014	-7992.041236	0.014628582	-7992.243575	0.524683178	NA	""	"ZC3H7A"	"ENSG00000122299.11"	"ENST00000574995.1"	17	60	100	0.08310466	0.1663	0.20635	0.20635	-306.624008	-306.624037	0.999971	NA	NA	NA	""	"ZC3H7A"	1	1	""	NA	NA	NA	""	""	2544	848	0.07866	0.16398	0.0145	0.1849	1	1	1	1	1	1	NA	NA	NA	""	"ZC3H7A"	"ZC3H7A_sequences_filtered_longestORFs_mafft_mincov_prank"	"ZC3H7A_all"	1242	24	"0.100883053669"	"0.091"	"Y"	"0.0003"	8	"35, 150, 272, 389, 423, 540, 614, 1033"	"N"	"0.9999988073966796"	0	"na"	"N"	"0.9433840075471273"	0	"na"	"N"	"1.0"	0	"na"	"N"	"1.0"	0	"na"	"ZC3H7A_sequences_filtered_longestORFs_mafft_prank"	"ZC3H7A"	1018	12	"0.207349246144"	"0.173"	"N"	0.9537	6	"194, 313, 318, 464, 606, 884"	"N"	"0.9999992934629285"	0	"na"	"Y"	"0.04687509899081552"	6	"92, 183, 216, 299, 318, 464"	"N"	"0.9314618921276734"	0	"na"	"N"	"0.3305491224578773"	0	"na"	""	""	"shared"
"ZDHHC5"	"ZDHHC5"	"ZDHHC5"	"S"	"ZDHHC5"	"list24_COV_list2nonOrf"	"zinc finger DHHC-type containing 5"	"DHHC5|ZNF375"	"no"	24	2148	716	0.12268	0.2455	0.0259	0.2108	1	1	1	1	1	1	NA	NA	NA	""	"ZDHHC5"	"ENSMLUG00000007907.2"	"ENSMLUT00000007912.2"	13	716	97.48603352	0.064428918	0.2339	0.56354	0.56388	-4860.870289	-4859.602846	0.281550627	NA	NA	NA	""	"ZDHHC5"	"ENSG00000156599.10"	"ENST00000529447.1"	14	300	99	0.080413163	0.1002	0.16659	0.16651	-1522.725007	-1522.654007	0.931461892	NA	NA	NA	""	"ZDHHC5"	1	1	""	NA	NA	NA	""	""	1848	616	0.12365	0.18502	0.0202	0.1636	0.99805	1	0.9804	1	1	1	NA	NA	NA	""	"ZDHHC5"	"ZDHHC5_sequences_filtered_longestORFs_mafft_mincov_prank"	"ZDHHC5_all"	823	24	"0.078488206473"	"0.075"	"Y"	"0.0351"	2	"597, 742"	"N"	"0.9848981471344455"	0	"na"	"Y"	"0.013502502486699652"	2	"404, 597"	"N"	"1.0"	0	"na"	"N"	"0.49213608756256844"	0	"na"	"ZDHHC5_sequences_filtered_longestORFs_mafft_prank"	"ZDHHC5"	768	12	"0.080123114130"	"0.080"	"N"	1	1	"95"	"N"	"0.8751057533143412"	0	"na"	"Y"	"0.00028950851490339055"	3	"95, 387, 688"	"N"	"1.0"	0	"na"	"N"	"0.26820598310847715"	0	"na"	""	""	"shared"
"ZNF318"	"ZNF318"	"ZNF318"	"nsp12"	"ZNF318"	"list24_COV_list2nonOrf"	"zinc finger protein 318"	"HRIHFB2436|TZF|ZFP318"	"no"	24	6855	2285	0.29861	0.4399	0.0859	0.2878	0.026812	0.1483075	0.038536	0.19268	0.091187	0.5392625	0.872	4.01109	2	"1482_V_0.972,1911_P_0.901"	"ZNF318"	"ENSMLUG00000009010.2"	"ENSMLUT00000009012.2"	8	2177	89.98621957	0.282912504	0.2315	0.69261	0.69462	-14715.78766	-14714.17339	0.199036312	NA	NA	NA	""	"ZNF318"	"ENSG00000171467.15"	"ENST00000361428.2"	11	2280	94.60526316	0.268984219	0.0914	0.29951	0.38485	-12518.15852	-12328.25031	3.34e-83	-12516.52556	7.01e-84	32	"R66, R67, S71, P73, R74, R55, R76, R77, V78, S81, R86, R87, S29, A36, R37, R38, S39, S40, P41, S46, S49, S50, R51, T52, P53, A54, V1481, R56, R58, S59, S61, H63"	"ZNF318"	0.013754741	0.318245251	""	NA	NA	NA	""	""	5829	1943	0.35013	0.33866	0.0731	0.2088	0.0047949	0.0559405	0.013839	0.152229	0.020265	0.251678225806452	0.378	7.65838	3	"1214_V_0.988,1505_A_0.931,1609_P_0.941"	"ZNF318"	"ZNF318_sequences_filtered_longestORFs_mafft_mincov_prank"	"ZNF318_all"	2496	24	"0.335852925463"	"0.343"	"Y"	"0.0000"	32	"38, 75, 78, 104, 174, 392, 443, 703, 799, 1177, 1372, 1492, 1636, 1646, 1647, 1663, 1814, 1897, 1929, 1946, 1995, 2088, 2098, 2166, 2181, 2243, 2249, 2250, 2287, 2356, 2372, 2483"	"Y"	"0.0010039629225922107"	0	""	"Y"	"1.3246467997073662e-05"	2	"1636, 2098"	"Y"	"7.829709942783089e-05"	2	"1636, 2098"	"Y"	"1.1348614329410036e-06"	6	"1636, 1817, 1929, 1954, 2098, 2243"	"ZNF318_sequences_filtered_longestORFs_mafft_prank"	"ZNF318"	2395	11	"0.361499795329"	"0.353"	"N"	0.1184	0	"na"	"N"	"0.8750270725798085"	0	"na"	"N"	"0.5452621832627409"	0	"na"	"N"	"0.6505090947231271"	0	"na"	"N"	"0.11567161588366141"	0	"na"	""	""	"shared"
"ZNF503"	"ZNF503"	"ZNF503"	"nsp9"	"ZNF503"	"list26_COV_list4dataset2nonOrf"	"zinc finger protein 503"	"NOLZ-1|NOLZ1|Nlz2"	"no"	24	1962	654	0.02521	0.4826	0.0172	0.6813	1	1	1	1	1	1	NA	NA	NA	""	"ZNF503"	"ENSMLUG00000012474.2"	"ENSMLUT00000012475.2"	8	645	87.28682171	0.031926297	0.3166	0.63753	0.63754	-3729.002853	-3729.00402	0.998833681	NA	NA	NA	""	"ZNF503"	"ENSG00000165655.16"	"ENST00000372524.4"	13	647	95.98145286	0.067052231	0.166	0.29355	0.29706	-3368.350648	-3368.028261	0.724417786	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	1050	350	0.02597	0.21013	0.0078	0.2986	1	1	1	1	0.99979	1	NA	NA	NA	""	"ZNF503"	"ZNF503_sequences_filtered_longestORFs_mafft_mincov_prank"	"ZNF503_all"	802	21	"0.049882463869"	"0.026"	"N"	"1.0000"	1	"87"	"N"	"0.9999980745506383"	0	"na"	"Y"	"0.024559140884415645"	1	"177"	"N"	"1.0"	0	"na"	"N"	"0.6206425292935231"	0	"na"	"ZNF503_sequences_filtered_longestORFs_mafft_prank"	"ZNF503"	682	9	"0.036470300914"	"0.033"	"N"	1	0	"na"	"N"	"0.9999987418249204"	0	"na"	"N"	"0.7780311233967817"	0	"na"	"N"	"1.0"	0	"na"	"N"	"1.0"	0	"na"	""	""	"shared"
"ZYG11B"	"ZYG11B"	"ZYG11B"	"orf10"	"ZYG11B"	"list25_COV_list3dataset2orf"	"zyg-11 family member B, cell cycle regulator"	"ZYG11"	"no"	24	2238	746	0.03689	0.26145	0.0101	0.2741	0.19666	0.565030597014925	0.012781	0.0936191666666667	0.4345	1	2.423	1.81431	0	"noneOver_0.9"	"ZYG11B"	"ENSMLUG00000024400.1"	"ENSMLUT00000027975.1"	9	384	94.27083333	0.0353737	0.2124	0.36098	0.36142	-2070.412641	-2069.648561	0.465762235	NA	NA	NA	""	""	""	""	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	""	""	NA	NA	""	NA	NA	NA	""	""	2007	669	0.05058	0.19347	0.0099	0.195	0.043798	0.3372446	0.0076933	0.0955458225806452	0.12764	0.963556862745098	2.124	2.7985	0	"noneOver_0.9"	"ZYG11B"	"ZYG11B_sequences_filtered_longestORFs_mafft_mincov_prank"	"ZYG11B_all"	1128	24	"0.023655415579"	"0.025"	"Y"	"0.0000"	1	"998"	"N"	"0.9999975270769591"	0	"na"	"Y"	"0.020268109682591493"	4	"896, 990, 993, 998"	"N"	"1.0"	0	"na"	"N"	"0.6757041139607441"	0	"na"	"ZYG11B_sequences_filtered_longestORFs_mafft_prank"	"ZYG11B"	854	12	"0.019630434764"	"0.021"	"N"	1	0	"na"	"N"	"0.9999984077343413"	0	"na"	"N"	"0.1157682212961436"	0	"na"	"N"	"1.0"	0	"na"	"N"	"0.6750287475861135"	0	"na"	""	""	"shared"