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  • Forked from LBMC / nextflow
    1100 commits behind the upstream repository.
    Laurent Modolo's avatar
    0d1550a8
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    Dockerfile 463 B
    
    FROM ubuntu:18.04
    MAINTAINER Laurent Modolo
    
    ENV HTSEQ_VERSION=0.8.0
    ENV PACKAGES build-essential=12.4* \
                 python3-pip=9.0.1* \
                 python3-setuptools=39.0.1* \
                 python3-dev=3.6.5* \
                 python3-wheel=0.30.0*
    
    RUN apt-get update && \
        apt-get install -y --no-install-recommends ${PACKAGES} && \
        apt-get clean
    
    RUN pip3 install numpy==1.14.3
    RUN pip3 install pysam==0.15.0
    RUN pip3 install HTSeq==${HTSEQ_VERSION}