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getTidyGlmmTMB.Rd
getValidDispersion.Rd
get_effects_from_rnorm.Rd
get_eval_data.Rd
get_eval_data_from_dds.Rd
get_eval_data_from_ltmb.Rd
get_inference_dds.Rd
get_label_y_position.Rd
get_mad_left_threshold.Rd
get_mad_user_message.Rd
get_messages_sequencing_depth.Rd
get_metrics_2plot.Rd
get_ml_metrics_obj.Rd
get_performances_metrics_obj.Rd
get_pr_curve.Rd
get_pr_object.Rd
get_roc_curve.Rd
get_roc_object.Rd
get_scaling_factor.Rd
glance_tmb.Rd
group_logQij_per_genes_and_labels.Rd
handleAnovaError.Rd
identifyTopFit.Rd
inferenceToExpected_withFixedEff.Rd
inferenceToExpected_withMixedEff.Rd
init_variable.Rd
inputs_checking.Rd
isValidEvalInput.Rd
isValidExpression.Rd
isValidGlmmTmb.Rd
isValidInput2fit.Rd
isValidList_tmb.Rd
isValidMock_obj.Rd
is_dispersionMatrixValid.Rd
is_formula_mixedTypeI.Rd
is_fullrank.Rd
is_mixedEffect_inFormula.Rd
is_positive_definite.Rd
is_truthLabels_valid.Rd
is_validGroupBy.Rd
join_dtf.Rd
launchFit.Rd
launchUpdate.Rd
medianRatioNormalization.Rd
mock_rnaseq.Rd
parallel_fit.Rd
parallel_update.Rd
performance-class.Rd
performance.Rd
pipe.Rd
precision.Rd
prediction-class.Rd
prediction.Rd
prepareData2computeInteraction.Rd
prepareData2fit.Rd
prepare_dataParallel.Rd
rbind_evaldata_tmb_dds.Rd
rbind_model_params_and_dispersion.Rd
recall.Rd
relevel_list_tmb_frame.Rd
relevelling_factors.Rd
removeDigitsAtEnd.Rd
removeDuplicatedWord.Rd
renameColumns.Rd
reorderColumns.Rd
replaceReferenceEffectBy0.Rd
replicateByGroup.Rd
replicateMatrix.Rd
replicateRows.Rd
rmse.Rd
samplingFromMvrnorm.Rd
scaleCountsTable.Rd
sensitivity.Rd
set_correlation.Rd
specificity.Rd
subsetByTermLabel.Rd
subsetFixEffectInferred.Rd
subsetGenes.Rd
subset_glance.Rd
tidy_results.Rd
tidy_tmb.Rd
trimmedMeanMvaluesNormalization.Rd
updateParallel.Rd
wald_test.Rd
warning_too_low_mu_ij_row.Rd
wrap_dds.Rd
wrapper_var_cor.Rd