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Commit a7ac943b authored by Arnaud Duvermy's avatar Arnaud Duvermy
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update README

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## Installation
* method A:
To install the latest version of HTRfit, run the following in your R console :
```
if (!requireNamespace("remotes", quietly = TRUE))
install.packages("remotes")
remotes::install_git("https://gitbio.ens-lyon.fr/aduvermy/HTRfit")
```
When dependencies are met, installation should take under 20 seconds.
* method B:
Alternatively, you can download a release on https://gitbio.ens-lyon.fr/aduvermy/HTRfit/-/releases.
Then, run the following in your R console:
```
## -- example with release HTRfit-v1.0.0
install.packages('/HTRfit-v1.0.0', repos = NULL, type='source')
```
When dependencies are met, installation should take a few minutes.
## CRAN packages dependencies
The following depandencies are mandatory:
```
install.packages(c("car", "parallel", "data.table", "ggplot2", "gridExtra",
"glmmTMB", "magrittr", "MASS", "plotROC", "reshape2",
"rlang", "S4Vectors", "stats", "utils"))
install.packages(c('car', 'parallel', 'data.table', 'ggplot2', 'gridExtra', 'glmmTMB', 'magrittr', 'MASS', 'plotROC', 'reshape2', 'rlang', 'stats', 'utils', 'BiocManager'))
BiocManager::install('S4Vectors', update = FALSE)
```
### System requirements
......
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