update readme

README.md

@@ -179,7 +179,7 @@ mock_data <- mock_rnaseq(input_var_list,
 data2fit = prepareData2fit(countMatrix = mock_data$counts, 
                            metadata =  mock_data$metadata, 
                            normalization = F)
-l_tmb <- fitModelParallel(formula = kij ~ varB + (varB | varA),
+l_tmb <- fitModelParallel(formula = kij ~ varA + varB  + varA:varB,
                           data = data2fit, 
                           group_by = "geneID",
                           family = glmmTMB::nbinom2(link = "log"), 
@@ -197,7 +197,7 @@ dds <- DESeq2::DESeq(dds, quiet = TRUE)
 
 ## -- get simulation/fit evaluation
 resSimu <- evaluation_report(list_tmb = l_tmb,
-                            dds_obj = dds,
+                            dds = dds,
                             mock_obj = mock_data, 
                             coeff_threshold = 0.4, 
                             alt_hypothesis = "greaterAbs")