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Fontrodona Nicolas's avatar
src/find_interaction_cluster/clip_figures/clip_launcher_4_many_communities.py:...
nfontrod authored 
src/find_interaction_cluster/clip_figures/clip_launcher_4_many_communities.py: changes in select_community_file, create_figure function and creation of load_clip_folder_param function: allow to create community figure showing enrichement for gene/exon regulated (in splicing) by a splicing factor
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README.md

ChIA-PET network

Description

Prerequisites

  1. This project is coded in python3.8 and uses the modules listed in requirements.txt. To easily install them with pip, enter in your terminal:
pip install -r requirements.txt
  1. PmagicGEO - a script that allows to obtain metadata associated to a GSE or a GSM (GEO classification)