src/find_interaction_cluster/__main__.py: script that launches ppi interaction

src/find_interaction_cluster/__main__.py

@@ -14,6 +14,7 @@ from typing import List
 from .install_hipMCL import install_hipmcl
 from .sf_and_communities import multiple_stat_launcher
 from .nt_and_community import multiple_nt_lmm_launcher
+from .create_ppi_files import ppi_stat_launcher
 import logging
 from ..logging_conf import logging_def
 
@@ -24,6 +25,7 @@ def launcher(weight: List[int] = (1),
              same_gene: bool = True,
              ps: int = ConfigGraph.cpu,
              html_fig: bool = False, feature: str = 'exon', region: str = '',
+             iteration_ppi: int = 1000,
              logging_level: str = "DISABLE"):
     """
     Script used to find communities inside  exon co-localized within a project
@@ -41,6 +43,8 @@ def launcher(weight: List[int] = (1),
     :param region: The region of a gene to analyse (used only if feature \
     is 'gene') (default '').
     :param logging_level: The level of data to display (default 'DISABLE')
+    :param iteration_ppi: the number of iteration for ppi analysis
+    :param ps: The number of processes to use
     """
     logging_def(ConfigGraph.community_folder, __file__, logging_level)
     if feature == "gene" and not same_gene:
@@ -56,6 +60,10 @@ def launcher(weight: List[int] = (1),
     multiple_nt_lmm_launcher(ps, weight, global_weight, same_gene, feature,
                              region,
                              logging_level)
+    if feature == "gene":
+        ppi_stat_launcher(ps, weight, global_weight, same_gene,
+                          ConfigGraph.ppi_threshold, iteration_ppi,
+                          logging_level)
 
 
 launcher()
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